RNA–Protein interactions for RNA: ENST00000588656.1

CHUK-203, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

TSL 3

Gene CHUK, Length 675 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-203ENST00000588656 TAF1CQ15572 869 aaPredicted RBP7.07□□□□□ -1.28
CHUK-203ENST00000588656 CCL15Q16663 113 aa7.07□□□□□ -1.28
CHUK-203ENST00000588656 MFSD14BQ5SR56 506 aa7.07□□□□□ -1.28
CHUK-203ENST00000588656 SLC4A10Q6U841 1118 aa7.07□□□□□ -1.28
CHUK-203ENST00000588656 LYPD4Q6UWN0 246 aa7.07□□□□□ -1.28
CHUK-203ENST00000588656 FAM43AQ8N2R8 423 aa7.07□□□□□ -1.28
CHUK-203ENST00000588656 BRI3BPQ8WY22 251 aa7.07□□□□□ -1.28
CHUK-203ENST00000588656 ERO1AQ96HE7 468 aa7.07□□□□□ -1.28
CHUK-203ENST00000588656 CNNM1Q9NRU3 951 aa7.07□□□□□ -1.28
CHUK-203ENST00000588656 CUEDC1Q9NWM3 386 aaPredicted RBP7.07□□□□□ -1.28
CHUK-203ENST00000588656 TTF2Q9UNY4 1162 aaKnown RBP7.07□□□□□ -1.28
CHUK-203ENST00000588656 DYRK1BQ9Y463 629 aa7.07□□□□□ -1.28
CHUK-203ENST00000588656 IGHA1P01876 353 aa7.06□□□□□ -1.28
CHUK-203ENST00000588656 CELA2BP08218 269 aaPredicted RBP7.06□□□□□ -1.28
CHUK-203ENST00000588656 ZBTB48P10074 688 aaPredicted RBP7.06□□□□□ -1.28
CHUK-203ENST00000588656 IL1R1P14778 569 aa7.06□□□□□ -1.28
CHUK-203ENST00000588656 IRS1P35568 1242 aa7.06□□□□□ -1.28
CHUK-203ENST00000588656 FXR1P51114 621 aaKnown RBP eCLIP7.06□□□□□ -1.28
CHUK-203ENST00000588656 NR1H3Q13133 447 aa7.06□□□□□ -1.28
CHUK-203ENST00000588656 GAS6Q14393 721 aa7.06□□□□□ -1.28
CHUK-203ENST00000588656 MAP3K11Q16584 847 aa7.06□□□□□ -1.28
CHUK-203ENST00000588656 SLC4A8Q2Y0W8 1093 aa7.06□□□□□ -1.28
CHUK-203ENST00000588656 SLC9C1Q4G0N8 1177 aa7.06□□□□□ -1.28
CHUK-203ENST00000588656 WDR44Q5JSH3 913 aa7.06□□□□□ -1.28
CHUK-203ENST00000588656 LDHAL6AQ6ZMR3 332 aa7.06□□□□□ -1.28
CHUK-203ENST00000588656 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.06□□□□□ -1.28
CHUK-203ENST00000588656 WWC1Q8IX03 1113 aa7.06□□□□□ -1.28
CHUK-203ENST00000588656 ANKRD13AQ8IZ07 590 aa7.06□□□□□ -1.28
CHUK-203ENST00000588656 BANK1Q8NDB2 785 aa7.06□□□□□ -1.28
CHUK-203ENST00000588656 IL27Q8NEV9 243 aa7.06□□□□□ -1.28
CHUK-203ENST00000588656 KLHDC4Q8TBB5 520 aa7.06□□□□□ -1.28
CHUK-203ENST00000588656 ZKSCAN4Q969J2 545 aaPredicted RBP7.06□□□□□ -1.28
CHUK-203ENST00000588656 SUCLG2Q96I99 432 aa7.06□□□□□ -1.28
CHUK-203ENST00000588656 PLA2G12BQ9BX93 195 aa7.06□□□□□ -1.28
CHUK-203ENST00000588656 CFHR5Q9BXR6 569 aa7.06□□□□□ -1.28
CHUK-203ENST00000588656 MYH16Q9H6N6 1097 aa7.06□□□□□ -1.28
CHUK-203ENST00000588656 DNMT3AQ9Y6K1 912 aaPredicted RBP7.06□□□□□ -1.28
CHUK-203ENST00000588656 MYO5AQ9Y4I1 1855 aaKnown RBP7.06□□□□□ -1.28
CHUK-203ENST00000588656 DOCK1Q14185 1865 aa7.05□□□□□ -1.28
CHUK-203ENST00000588656 LOC100996750A0A140TA64 210 aa7.05□□□□□ -1.28
CHUK-203ENST00000588656 CTGFP29279 349 aa7.05□□□□□ -1.28
CHUK-203ENST00000588656 CRKP46108 304 aa7.05□□□□□ -1.28
CHUK-203ENST00000588656 POU4F2Q12837 409 aa7.05□□□□□ -1.28
CHUK-203ENST00000588656 MTFR1Q15390 333 aa7.05□□□□□ -1.28
CHUK-203ENST00000588656 DBN1Q16643 649 aa7.05□□□□□ -1.28
CHUK-203ENST00000588656 CCDC57Q2TAC2 916 aa7.05□□□□□ -1.28
CHUK-203ENST00000588656 SUPT20HL1Q3ZLR7 823 aa7.05□□□□□ -1.28
CHUK-203ENST00000588656 NOM1Q5C9Z4 860 aaKnown RBP7.05□□□□□ -1.28
CHUK-203ENST00000588656 BEND3Q5T5X7 828 aa7.05□□□□□ -1.28
CHUK-203ENST00000588656 RIPOR1Q6ZS17 1223 aa7.05□□□□□ -1.28
CHUK-203ENST00000588656 CYP2U1Q7Z449 544 aa7.05□□□□□ -1.28
CHUK-203ENST00000588656 DZIP1LQ8IYY4 767 aaKnown RBP7.05□□□□□ -1.28
CHUK-203ENST00000588656 LINS1Q8NG48 757 aa7.05□□□□□ -1.28
CHUK-203ENST00000588656 ZNF837Q96EG3 531 aaPredicted RBP7.05□□□□□ -1.28
CHUK-203ENST00000588656 TEPSINQ96N21 525 aa7.05□□□□□ -1.28
CHUK-203ENST00000588656 KRTAP4-6Q9BYQ5 205 aa7.05□□□□□ -1.28
CHUK-203ENST00000588656 PPP2R3BQ9Y5P8 575 aa7.05□□□□□ -1.28
CHUK-203ENST00000588656 CDK5RAP2Q96SN8 1893 aa7.04□□□□□ -1.28
CHUK-203ENST00000588656 H0YGN5 161 aa7.04□□□□□ -1.28
CHUK-203ENST00000588656 VAMP4O75379 141 aa7.04□□□□□ -1.28
CHUK-203ENST00000588656 FRAT2O75474 233 aaPredicted RBP7.04□□□□□ -1.28
CHUK-203ENST00000588656 FOXK2Q01167 660 aa7.04□□□□□ -1.28
CHUK-203ENST00000588656 CLN3Q13286 438 aa7.04□□□□□ -1.28
CHUK-203ENST00000588656 LRRC24Q50LG9 513 aa7.04□□□□□ -1.28
CHUK-203ENST00000588656 OTUD7BQ6GQQ9 843 aa7.04□□□□□ -1.28
CHUK-203ENST00000588656 MIGA2Q7L4E1 593 aa7.04□□□□□ -1.28
CHUK-203ENST00000588656 MTMR14Q8NCE2 650 aa7.04□□□□□ -1.28
CHUK-203ENST00000588656 ZNF333Q96JL9 665 aa7.04□□□□□ -1.28
CHUK-203ENST00000588656 FAM84BQ96KN1 310 aaPredicted RBP7.04□□□□□ -1.28
CHUK-203ENST00000588656 TRERF1Q96PN7 1200 aa7.04□□□□□ -1.28
CHUK-203ENST00000588656 WRNIP1Q96S55 665 aa7.04□□□□□ -1.28
CHUK-203ENST00000588656 GRIP2Q9C0E4 1043 aa7.04□□□□□ -1.28
CHUK-203ENST00000588656 C9orf78Q9NZ63 289 aaPredicted RBP7.04□□□□□ -1.28
CHUK-203ENST00000588656 CPA4Q9UI42 421 aa7.04□□□□□ -1.28
CHUK-203ENST00000588656 SNCAIPQ9Y6H5 919 aa7.04□□□□□ -1.28
CHUK-203ENST00000588656 BTBD19C9JJ37 291 aa7.03□□□□□ -1.28
CHUK-203ENST00000588656 APBB1O00213 710 aa7.03□□□□□ -1.28
CHUK-203ENST00000588656 GRM8O00222 908 aa7.03□□□□□ -1.28
CHUK-203ENST00000588656 NBPF7P0C2Y1 421 aaPredicted RBP7.03□□□□□ -1.28
CHUK-203ENST00000588656 HIBADHP31937 336 aaKnown RBP7.03□□□□□ -1.28
CHUK-203ENST00000588656 INPP5BP32019 993 aa7.03□□□□□ -1.28
CHUK-203ENST00000588656 INHBEP58166 350 aa7.03□□□□□ -1.28
CHUK-203ENST00000588656 TCP10Q12799 353 aa7.03□□□□□ -1.28
CHUK-203ENST00000588656 INTS3Q68E01 1043 aaKnown RBP7.03□□□□□ -1.28
CHUK-203ENST00000588656 VPS37DQ86XT2 251 aa7.03□□□□□ -1.28
CHUK-203ENST00000588656 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.03□□□□□ -1.28
CHUK-203ENST00000588656 TDRD7Q8NHU6 1098 aaKnown RBP7.03□□□□□ -1.28
CHUK-203ENST00000588656 ARMC5Q96C12 935 aa7.03□□□□□ -1.28
CHUK-203ENST00000588656 GCC1Q96CN9 775 aa7.03□□□□□ -1.28
CHUK-203ENST00000588656 SHISA4Q96DD7 197 aa7.03□□□□□ -1.28
CHUK-203ENST00000588656 GAS2L1Q99501 681 aaPredicted RBP7.03□□□□□ -1.28
CHUK-203ENST00000588656 BICC1Q9H694 974 aaKnown RBP7.03□□□□□ -1.28
CHUK-203ENST00000588656 ZFYVE28Q9HCC9 887 aa7.03□□□□□ -1.28
CHUK-203ENST00000588656 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.03□□□□□ -1.28
CHUK-203ENST00000588656 CSADQ9Y600 493 aa7.03□□□□□ -1.28
CHUK-203ENST00000588656 RANBP2P49792 3224 aaKnown RBP7.03□□□□□ -1.28
CHUK-203ENST00000588656 FAM205AQ6ZU69 1335 aa7.02□□□□□ -1.28
CHUK-203ENST00000588656 SPATA31C2B4DYI2 1134 aa7.02□□□□□ -1.29
CHUK-203ENST00000588656 GTF2A2P52657 109 aa7.02□□□□□ -1.29
CHUK-203ENST00000588656 TNFAIP1Q13829 316 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms