RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 NMT2O60551 498 aa23.91■■□□□ 1.42
DDX39A-207ENST00000588542 CYP21A2P08686 494 aa23.91■■□□□ 1.42
DDX39A-207ENST00000588542 OSBPP22059 807 aa23.91■■□□□ 1.42
DDX39A-207ENST00000588542 CAP1Q01518 475 aa23.91■■□□□ 1.42
DDX39A-207ENST00000588542 CATSPERGQ6ZRH7 1159 aa23.91■■□□□ 1.42
DDX39A-207ENST00000588542 P2RX7Q99572 595 aaKnown RBP23.91■■□□□ 1.42
DDX39A-207ENST00000588542 USP17L15C9J2P7 530 aa23.9■■□□□ 1.42
DDX39A-207ENST00000588542 USP17L13C9JLJ4 530 aa23.9■■□□□ 1.42
DDX39A-207ENST00000588542 USP17L11C9JVI0 530 aa23.9■■□□□ 1.42
DDX39A-207ENST00000588542 USP17L18D6R9N7 530 aa23.9■■□□□ 1.42
DDX39A-207ENST00000588542 USP17L22D6RA61 530 aa23.9■■□□□ 1.42
DDX39A-207ENST00000588542 USP17L17D6RBQ6 530 aa23.9■■□□□ 1.42
DDX39A-207ENST00000588542 USP17L19D6RCP7 530 aa23.9■■□□□ 1.42
DDX39A-207ENST00000588542 USP17L20D6RJB6 530 aa23.9■■□□□ 1.42
DDX39A-207ENST00000588542 TTLL1O95922 423 aa23.9■■□□□ 1.42
DDX39A-207ENST00000588542 NOVP48745 357 aa23.9■■□□□ 1.42
DDX39A-207ENST00000588542 USP17L24Q0WX57 530 aa23.9■■□□□ 1.42
DDX39A-207ENST00000588542 KIAA1211Q6ZU35 1233 aa23.9■■□□□ 1.42
DDX39A-207ENST00000588542 LPAR1Q92633 364 aa23.9■■□□□ 1.42
DDX39A-207ENST00000588542 RPAP3Q9H6T3 665 aaPredicted RBP23.9■■□□□ 1.42
DDX39A-207ENST00000588542 RBM8AQ9Y5S9 174 aaKnown RBP23.9■■□□□ 1.42
DDX39A-207ENST00000588542 IRX3P78415 501 aaPredicted RBP23.89■■□□□ 1.41
DDX39A-207ENST00000588542 POTEEQ6S8J3 1075 aa23.89■■□□□ 1.41
DDX39A-207ENST00000588542 CASC1Q6TDU7 716 aa23.89■■□□□ 1.41
DDX39A-207ENST00000588542 SPICE1Q8N0Z3 855 aa23.89■■□□□ 1.41
DDX39A-207ENST00000588542 CD99L2Q8TCZ2 262 aa23.89■■□□□ 1.41
DDX39A-207ENST00000588542 SMCR8Q8TEV9 937 aaPredicted RBP23.89■■□□□ 1.41
DDX39A-207ENST00000588542 TAF6LQ9Y6J9 622 aa23.89■■□□□ 1.41
DDX39A-207ENST00000588542 A0A0G2JMZ2 1700 aa23.88■■□□□ 1.41
DDX39A-207ENST00000588542 HERVK_113P62684 666 aa23.88■■□□□ 1.41
DDX39A-207ENST00000588542 GOPCQ9HD26 462 aa23.88■■□□□ 1.41
DDX39A-207ENST00000588542 ANO2Q9NQ90 1003 aa23.88■■□□□ 1.41
DDX39A-207ENST00000588542 TCP11L1Q9NUJ3 509 aa23.88■■□□□ 1.41
DDX39A-207ENST00000588542 COL11A1P12107 1806 aaPredicted RBP23.87■■□□□ 1.41
DDX39A-207ENST00000588542 ESR2Q92731 530 aa23.87■■□□□ 1.41
DDX39A-207ENST00000588542 ERO1AQ96HE7 468 aa23.87■■□□□ 1.41
DDX39A-207ENST00000588542 SYNPO2Q9UMS6 1093 aa23.87■■□□□ 1.41
DDX39A-207ENST00000588542 DOCK3Q8IZD9 2030 aa23.86■■□□□ 1.41
DDX39A-207ENST00000588542 B4E1Z4 1266 aa23.86■■□□□ 1.41
DDX39A-207ENST00000588542 F5H6K3 240 aa23.86■■□□□ 1.41
DDX39A-207ENST00000588542 WDR46O15213 610 aaKnown RBP23.86■■□□□ 1.41
DDX39A-207ENST00000588542 GCLCP48506 637 aaPredicted RBP23.86■■□□□ 1.41
DDX39A-207ENST00000588542 NT5C2P49902 561 aa23.86■■□□□ 1.41
DDX39A-207ENST00000588542 LACTBP83111 547 aaPredicted RBP23.86■■□□□ 1.41
DDX39A-207ENST00000588542 KLRC3Q07444 240 aa23.86■■□□□ 1.41
DDX39A-207ENST00000588542 LRRC47Q8N1G4 583 aaKnown RBP23.86■■□□□ 1.41
DDX39A-207ENST00000588542 ANKRD13CQ8N6S4 541 aa23.86■■□□□ 1.41
DDX39A-207ENST00000588542 KDM4AO75164 1064 aa23.85■■□□□ 1.41
DDX39A-207ENST00000588542 NDUFB10O96000 172 aa23.85■■□□□ 1.41
DDX39A-207ENST00000588542 CTGFP29279 349 aa23.85■■□□□ 1.41
DDX39A-207ENST00000588542 NECTIN1Q15223 517 aa23.85■■□□□ 1.41
DDX39A-207ENST00000588542 PPP4R3BQ5MIZ7 849 aa23.85■■□□□ 1.41
DDX39A-207ENST00000588542 ARHGAP39Q9C0H5 1083 aa23.85■■□□□ 1.41
DDX39A-207ENST00000588542 CNNM2Q9H8M5 875 aa23.85■■□□□ 1.41
DDX39A-207ENST00000588542 STX8Q9UNK0 236 aa23.85■■□□□ 1.41
DDX39A-207ENST00000588542 PEX10O60683 326 aa23.84■■□□□ 1.41
DDX39A-207ENST00000588542 FAM110CQ1W6H9 321 aa23.84■■□□□ 1.41
DDX39A-207ENST00000588542 RCSD1Q6JBY9 416 aa23.84■■□□□ 1.41
DDX39A-207ENST00000588542 LBX2Q6XYB7 198 aa23.84■■□□□ 1.41
DDX39A-207ENST00000588542 STOX1Q6ZVD7 989 aa23.84■■□□□ 1.41
DDX39A-207ENST00000588542 CTU1Q7Z7A3 348 aaKnown RBP23.84■■□□□ 1.41
DDX39A-207ENST00000588542 GMCL1P1Q8NEA9 526 aa23.84■■□□□ 1.41
DDX39A-207ENST00000588542 KRT23Q9C075 422 aa23.84■■□□□ 1.41
DDX39A-207ENST00000588542 TANGO6Q9C0B7 1094 aa23.84■■□□□ 1.41
DDX39A-207ENST00000588542 TXNRD2Q9NNW7 524 aa23.84■■□□□ 1.41
DDX39A-207ENST00000588542 ZSWIM5Q9P217 1185 aa23.84■■□□□ 1.41
DDX39A-207ENST00000588542 RBPJLQ9UBG7 517 aa23.84■■□□□ 1.41
DDX39A-207ENST00000588542 MORF4L1Q9UBU8 362 aa23.84■■□□□ 1.41
DDX39A-207ENST00000588542 SPDYE16A6NNV3 312 aaPredicted RBP23.83■■□□□ 1.41
DDX39A-207ENST00000588542 E7EWF7 191 aa23.83■■□□□ 1.41
DDX39A-207ENST00000588542 RAD21O60216 631 aa23.83■■□□□ 1.41
DDX39A-207ENST00000588542 FAM83BQ5T0W9 1011 aa23.83■■□□□ 1.41
DDX39A-207ENST00000588542 OTOP1Q7RTM1 612 aa23.83■■□□□ 1.41
DDX39A-207ENST00000588542 NUP88Q99567 741 aaPredicted RBP23.83■■□□□ 1.41
DDX39A-207ENST00000588542 ZKSCAN3Q9BRR0 538 aa23.83■■□□□ 1.41
DDX39A-207ENST00000588542 HTTP42858 3142 aa23.82■■□□□ 1.4
DDX39A-207ENST00000588542 SLC27A2O14975 620 aa23.82■■□□□ 1.4
DDX39A-207ENST00000588542 CNMDO75829 334 aa23.82■■□□□ 1.4
DDX39A-207ENST00000588542 COG2Q14746 738 aa23.82■■□□□ 1.4
DDX39A-207ENST00000588542 CREB3L3Q68CJ9 461 aa23.82■■□□□ 1.4
DDX39A-207ENST00000588542 TMEM47Q9BQJ4 181 aa23.82■■□□□ 1.4
DDX39A-207ENST00000588542 DSG3P32926 999 aa23.81■■□□□ 1.4
DDX39A-207ENST00000588542 SLFN13Q68D06 897 aa23.81■■□□□ 1.4
DDX39A-207ENST00000588542 CYB5R4Q7L1T6 521 aa23.81■■□□□ 1.4
DDX39A-207ENST00000588542 GTF3C2Q8WUA4 911 aaPredicted RBP23.81■■□□□ 1.4
DDX39A-207ENST00000588542 TRIM47Q96LD4 638 aa23.81■■□□□ 1.4
DDX39A-207ENST00000588542 TTC14Q96N46 770 aa23.81■■□□□ 1.4
DDX39A-207ENST00000588542 FBXO28Q9NVF7 368 aa23.81■■□□□ 1.4
DDX39A-207ENST00000588542 HOXC10Q9NYD6 342 aa23.81■■□□□ 1.4
DDX39A-207ENST00000588542 PLXNB2O15031 1838 aa23.8■■□□□ 1.4
DDX39A-207ENST00000588542 FLOT1O75955 427 aa23.8■■□□□ 1.4
DDX39A-207ENST00000588542 ECM2O94769 699 aaPredicted RBP23.8■■□□□ 1.4
DDX39A-207ENST00000588542 TOP1P11387 765 aaKnown RBP23.8■■□□□ 1.4
DDX39A-207ENST00000588542 PSMC4P43686 418 aa23.8■■□□□ 1.4
DDX39A-207ENST00000588542 KIF22Q14807 665 aa23.8■■□□□ 1.4
DDX39A-207ENST00000588542 Q3C1V9 767 aa23.8■■□□□ 1.4
DDX39A-207ENST00000588542 MCOLN1Q9GZU1 580 aa23.8■■□□□ 1.4
DDX39A-207ENST00000588542 EFCC1Q9HA90 598 aa23.8■■□□□ 1.4
DDX39A-207ENST00000588542 RABGAP1Q9Y3P9 1069 aa23.8■■□□□ 1.4
DDX39A-207ENST00000588542 TRIM17Q9Y577 477 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms