RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 STRNO43815 780 aa18.62■□□□□ 0.57
IFT20-216ENST00000588477 SURF6O75683 361 aaKnown RBP18.62■□□□□ 0.57
IFT20-216ENST00000588477 GUCY1A2P33402 732 aa18.62■□□□□ 0.57
IFT20-216ENST00000588477 SHMT1P34896 483 aa18.62■□□□□ 0.57
IFT20-216ENST00000588477 PLCD1P51178 756 aa18.62■□□□□ 0.57
IFT20-216ENST00000588477 COG2Q14746 738 aa18.62■□□□□ 0.57
IFT20-216ENST00000588477 PRAMEF19Q5SWL8 479 aa18.62■□□□□ 0.57
IFT20-216ENST00000588477 SH3RF1Q7Z6J0 888 aa18.62■□□□□ 0.57
IFT20-216ENST00000588477 CERS3Q8IU89 383 aa18.62■□□□□ 0.57
IFT20-216ENST00000588477 FERMT2Q96AC1 680 aa18.62■□□□□ 0.57
IFT20-216ENST00000588477 CCDC8Q9H0W5 538 aaPredicted RBP18.62■□□□□ 0.57
IFT20-216ENST00000588477 TTYH1Q9H313 450 aaPredicted RBP18.62■□□□□ 0.57
IFT20-216ENST00000588477 TLR7Q9NYK1 1049 aaKnown RBP18.62■□□□□ 0.57
IFT20-216ENST00000588477 DBNLQ9UJU6 430 aaKnown RBP18.62■□□□□ 0.57
IFT20-216ENST00000588477 SEPT4O43236 478 aa18.61■□□□□ 0.57
IFT20-216ENST00000588477 COBLO75128 1261 aa18.61■□□□□ 0.57
IFT20-216ENST00000588477 BCAR3O75815 825 aa18.61■□□□□ 0.57
IFT20-216ENST00000588477 ADCYAP1R1P41586 468 aa18.61■□□□□ 0.57
IFT20-216ENST00000588477 SMAD3P84022 425 aaKnown RBP18.61■□□□□ 0.57
IFT20-216ENST00000588477 SEPT2Q15019 361 aa18.61■□□□□ 0.57
IFT20-216ENST00000588477 SSH3Q8TE77 659 aa18.61■□□□□ 0.57
IFT20-216ENST00000588477 PDLIM7Q9NR12 457 aa18.61■□□□□ 0.57
IFT20-216ENST00000588477 HOXC10Q9NYD6 342 aa18.61■□□□□ 0.57
IFT20-216ENST00000588477 SPTBN5Q9NRC6 3674 aaKnown RBP18.61■□□□□ 0.57
IFT20-216ENST00000588477 BAZ2AQ9UIF9 1905 aaKnown RBP18.61■□□□□ 0.57
IFT20-216ENST00000588477 TRIM43BA6NCK2 446 aa18.6■□□□□ 0.57
IFT20-216ENST00000588477 POLR3DP05423 398 aaPredicted RBP18.6■□□□□ 0.57
IFT20-216ENST00000588477 ERCC3P19447 782 aa18.6■□□□□ 0.57
IFT20-216ENST00000588477 ATP8B2P98198 1209 aa18.6■□□□□ 0.57
IFT20-216ENST00000588477 SNX17Q15036 470 aa18.6■□□□□ 0.57
IFT20-216ENST00000588477 TRIM43Q96BQ3 446 aaPredicted RBP18.6■□□□□ 0.57
IFT20-216ENST00000588477 TANGO6Q9C0B7 1094 aa18.6■□□□□ 0.57
IFT20-216ENST00000588477 SPATC1LQ9H0A9 340 aa18.6■□□□□ 0.57
IFT20-216ENST00000588477 ANTXR1Q9H6X2 564 aa18.6■□□□□ 0.57
IFT20-216ENST00000588477 A0A1W2PRG0 241 aa18.59■□□□□ 0.57
IFT20-216ENST00000588477 MPHOSPH10O00566 681 aaKnown RBP18.59■□□□□ 0.57
IFT20-216ENST00000588477 LRRC41Q15345 812 aa18.59■□□□□ 0.57
IFT20-216ENST00000588477 TMEM57Q8N5G2 664 aa18.59■□□□□ 0.57
IFT20-216ENST00000588477 EAF2Q96CJ1 260 aaPredicted RBP18.59■□□□□ 0.57
IFT20-216ENST00000588477 SLC5A4Q9NY91 659 aa18.59■□□□□ 0.57
IFT20-216ENST00000588477 FOSL2P15408 326 aa18.58■□□□□ 0.56
IFT20-216ENST00000588477 MAP3K12Q12852 859 aa18.58■□□□□ 0.56
IFT20-216ENST00000588477 PLS1Q14651 629 aa18.58■□□□□ 0.56
IFT20-216ENST00000588477 NCAPG2Q86XI2 1143 aa18.58■□□□□ 0.56
IFT20-216ENST00000588477 SHCBP1Q8NEM2 672 aa18.58■□□□□ 0.56
IFT20-216ENST00000588477 EVX2Q03828 476 aa18.57■□□□□ 0.56
IFT20-216ENST00000588477 TLE2Q04725 743 aa18.57■□□□□ 0.56
IFT20-216ENST00000588477 FAM47AQ5JRC9 791 aa18.57■□□□□ 0.56
IFT20-216ENST00000588477 C1orf53Q5VUE5 145 aa18.57■□□□□ 0.56
IFT20-216ENST00000588477 RIOK1Q9BRS2 568 aaKnown RBP18.57■□□□□ 0.56
IFT20-216ENST00000588477 C1orf115Q9H7X2 142 aa18.57■□□□□ 0.56
IFT20-216ENST00000588477 PRDM6Q9NQX0 595 aa18.57■□□□□ 0.56
IFT20-216ENST00000588477 ITGB8P26012 769 aa18.56■□□□□ 0.56
IFT20-216ENST00000588477 DSG3P32926 999 aa18.56■□□□□ 0.56
IFT20-216ENST00000588477 GABPAQ06546 454 aa18.56■□□□□ 0.56
IFT20-216ENST00000588477 KIAA1755Q5JYT7 1200 aa18.56■□□□□ 0.56
IFT20-216ENST00000588477 MAML3Q96JK9 1138 aa18.56■□□□□ 0.56
IFT20-216ENST00000588477 MROH8Q9H579 483 aa18.56■□□□□ 0.56
IFT20-216ENST00000588477 NOP58Q9Y2X3 529 aaKnown RBP18.56■□□□□ 0.56
IFT20-216ENST00000588477 TACC3Q9Y6A5 838 aa18.56■□□□□ 0.56
IFT20-216ENST00000588477 MAGEB6P1A0A0J9YX57 407 aa18.55■□□□□ 0.56
IFT20-216ENST00000588477 SAMD1Q6SPF0 538 aaPredicted RBP18.55■□□□□ 0.56
IFT20-216ENST00000588477 MB21D1Q8N884 522 aa18.55■□□□□ 0.56
IFT20-216ENST00000588477 SYMPKQ92797 1274 aaKnown RBP18.55■□□□□ 0.56
IFT20-216ENST00000588477 RNPC3Q96LT9 517 aaKnown RBP18.55■□□□□ 0.56
IFT20-216ENST00000588477 MCM9Q9NXL9 1143 aa18.55■□□□□ 0.56
IFT20-216ENST00000588477 FLOT1O75955 427 aa18.54■□□□□ 0.56
IFT20-216ENST00000588477 CLTBP09497 229 aa18.54■□□□□ 0.56
IFT20-216ENST00000588477 EPHB4P54760 987 aa18.54■□□□□ 0.56
IFT20-216ENST00000588477 ABRAQ8N0Z2 381 aa18.54■□□□□ 0.56
IFT20-216ENST00000588477 ATG4CQ96DT6 458 aa18.54■□□□□ 0.56
IFT20-216ENST00000588477 XPNPEP3Q9NQH7 507 aa18.54■□□□□ 0.56
IFT20-216ENST00000588477 PHF24Q9UPV7 400 aa18.54■□□□□ 0.56
IFT20-216ENST00000588477 MYO9BQ13459 2157 aa18.54■□□□□ 0.56
IFT20-216ENST00000588477 FCER1AP12319 257 aa18.53■□□□□ 0.56
IFT20-216ENST00000588477 RAG1P15918 1043 aa18.53■□□□□ 0.56
IFT20-216ENST00000588477 TMED8Q6PL24 325 aaPredicted RBP18.53■□□□□ 0.56
IFT20-216ENST00000588477 SPICE1Q8N0Z3 855 aa18.53■□□□□ 0.56
IFT20-216ENST00000588477 CRNKL1Q9BZJ0 848 aaKnown RBP18.53■□□□□ 0.56
IFT20-216ENST00000588477 TMEM265A0A087WTH1 108 aa18.52■□□□□ 0.56
IFT20-216ENST00000588477 PGK1P00558 417 aa18.52■□□□□ 0.56
IFT20-216ENST00000588477 RARBP10826 455 aa18.52■□□□□ 0.56
IFT20-216ENST00000588477 ZKSCAN2Q63HK3 967 aa18.52■□□□□ 0.56
IFT20-216ENST00000588477 TMEM179Q6ZVK1 233 aa18.52■□□□□ 0.56
IFT20-216ENST00000588477 RNF180Q86T96 592 aa18.52■□□□□ 0.56
IFT20-216ENST00000588477 SLC44A5Q8NCS7 719 aa18.52■□□□□ 0.56
IFT20-216ENST00000588477 SDR42E1Q8WUS8 393 aa18.52■□□□□ 0.56
IFT20-216ENST00000588477 GBF1Q92538 1859 aa18.52■□□□□ 0.55
IFT20-216ENST00000588477 MCM3APO60318 1980 aa18.51■□□□□ 0.55
IFT20-216ENST00000588477 MYH7P12883 1935 aa18.51■□□□□ 0.55
IFT20-216ENST00000588477 PQBP1O60828 265 aaKnown RBP18.51■□□□□ 0.55
IFT20-216ENST00000588477 GRIN2CQ14957 1233 aa18.51■□□□□ 0.55
IFT20-216ENST00000588477 SLC9C2Q5TAH2 1124 aa18.51■□□□□ 0.55
IFT20-216ENST00000588477 CLEC10AQ8IUN9 316 aa18.51■□□□□ 0.55
IFT20-216ENST00000588477 SIAH1Q8IUQ4 282 aa18.51■□□□□ 0.55
IFT20-216ENST00000588477 ARHGEF10LQ9HCE6 1279 aa18.51■□□□□ 0.55
IFT20-216ENST00000588477 A0A1W2PQ45 241 aaPredicted RBP18.5■□□□□ 0.55
IFT20-216ENST00000588477 A0A1W2PQY0 241 aa18.5■□□□□ 0.55
IFT20-216ENST00000588477 KIAA0355O15063 1070 aa18.5■□□□□ 0.55
IFT20-216ENST00000588477 SLC25A27O95847 323 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms