RNA–Protein interactions for RNA: ENST00000588472.6

SDF2-207, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 681 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-207ENST00000588472 Q3C1V9 767 aa10.56□□□□□ -0.72
SDF2-207ENST00000588472 SBK1Q52WX2 424 aa10.56□□□□□ -0.72
SDF2-207ENST00000588472 KIAA1755Q5JYT7 1200 aa10.56□□□□□ -0.72
SDF2-207ENST00000588472 CATSPERGQ6ZRH7 1159 aa10.56□□□□□ -0.72
SDF2-207ENST00000588472 SIAH1Q8IUQ4 282 aa10.56□□□□□ -0.72
SDF2-207ENST00000588472 PLEKHM2Q8IWE5 1019 aa10.56□□□□□ -0.72
SDF2-207ENST00000588472 ZNF444Q8N0Y2 327 aaPredicted RBP10.56□□□□□ -0.72
SDF2-207ENST00000588472 CHMP4CQ96CF2 233 aa10.56□□□□□ -0.72
SDF2-207ENST00000588472 C12orf42Q96LP6 360 aa10.56□□□□□ -0.72
SDF2-207ENST00000588472 RBPJLQ9UBG7 517 aa10.56□□□□□ -0.72
SDF2-207ENST00000588472 MGAMO43451 1857 aa10.55□□□□□ -0.72
SDF2-207ENST00000588472 MYH8P13535 1937 aa10.55□□□□□ -0.72
SDF2-207ENST00000588472 A0A0D9SFI3 127 aa10.55□□□□□ -0.72
SDF2-207ENST00000588472 RASA1P20936 1047 aa10.55□□□□□ -0.72
SDF2-207ENST00000588472 ERVK-9P63128 1117 aa10.55□□□□□ -0.72
SDF2-207ENST00000588472 ERVK-24P63145 666 aa10.55□□□□□ -0.72
SDF2-207ENST00000588472 NMIQ13287 307 aaPredicted RBP10.55□□□□□ -0.72
SDF2-207ENST00000588472 VPS53Q5VIR6 699 aa10.55□□□□□ -0.72
SDF2-207ENST00000588472 SH2D4AQ9H788 454 aa10.55□□□□□ -0.72
SDF2-207ENST00000588472 KANSL2Q9H9L4 492 aa10.55□□□□□ -0.72
SDF2-207ENST00000588472 INCENPQ9NQS7 918 aa10.55□□□□□ -0.72
SDF2-207ENST00000588472 SLC3A2P08195 630 aaKnown RBP10.54□□□□□ -0.72
SDF2-207ENST00000588472 CCL5P13501 91 aa10.54□□□□□ -0.72
SDF2-207ENST00000588472 CYP2B6P20813 491 aa10.54□□□□□ -0.72
SDF2-207ENST00000588472 UBXN2AP68543 259 aa10.54□□□□□ -0.72
SDF2-207ENST00000588472 CTDSPL2Q05D32 466 aa10.54□□□□□ -0.72
SDF2-207ENST00000588472 PDE4BQ07343 736 aa10.54□□□□□ -0.72
SDF2-207ENST00000588472 PPARAQ07869 468 aa10.54□□□□□ -0.72
SDF2-207ENST00000588472 PLS1Q14651 629 aa10.54□□□□□ -0.72
SDF2-207ENST00000588472 COG2Q14746 738 aa10.54□□□□□ -0.72
SDF2-207ENST00000588472 MCMDC2Q4G0Z9 681 aa10.54□□□□□ -0.72
SDF2-207ENST00000588472 FAM47AQ5JRC9 791 aa10.54□□□□□ -0.72
SDF2-207ENST00000588472 POTEEQ6S8J3 1075 aa10.54□□□□□ -0.72
SDF2-207ENST00000588472 CHRDL2Q6WN34 429 aa10.54□□□□□ -0.72
SDF2-207ENST00000588472 SLAIN1Q8ND83 568 aa10.54□□□□□ -0.72
SDF2-207ENST00000588472 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.54□□□□□ -0.72
SDF2-207ENST00000588472 PORCNQ9H237 461 aa10.54□□□□□ -0.72
SDF2-207ENST00000588472 ZNF287Q9HBT7 754 aa10.54□□□□□ -0.72
SDF2-207ENST00000588472 HELLSQ9NRZ9 838 aa10.54□□□□□ -0.72
SDF2-207ENST00000588472 MORF4L1Q9UBU8 362 aa10.54□□□□□ -0.72
SDF2-207ENST00000588472 CLIP2Q9UDT6 1046 aa10.54□□□□□ -0.72
SDF2-207ENST00000588472 TMX2Q9Y320 296 aa10.54□□□□□ -0.72
SDF2-207ENST00000588472 RBBP6Q7Z6E9 1792 aaKnown RBP10.54□□□□□ -0.72
SDF2-207ENST00000588472 DLL1O00548 723 aa10.53□□□□□ -0.72
SDF2-207ENST00000588472 CNMDO75829 334 aa10.53□□□□□ -0.72
SDF2-207ENST00000588472 FLOT1O75955 427 aa10.53□□□□□ -0.72
SDF2-207ENST00000588472 INHAP05111 366 aa10.53□□□□□ -0.72
SDF2-207ENST00000588472 TSPY3P0CV98 308 aa10.53□□□□□ -0.72
SDF2-207ENST00000588472 TSPY8P0CW00 308 aa10.53□□□□□ -0.72
SDF2-207ENST00000588472 SDSP20132 328 aa10.53□□□□□ -0.72
SDF2-207ENST00000588472 TFAP4Q01664 338 aa10.53□□□□□ -0.72
SDF2-207ENST00000588472 CWC27Q6UX04 472 aaKnown RBP10.53□□□□□ -0.72
SDF2-207ENST00000588472 GTF3C2Q8WUA4 911 aaPredicted RBP10.53□□□□□ -0.72
SDF2-207ENST00000588472 DPF3Q92784 378 aa10.53□□□□□ -0.72
SDF2-207ENST00000588472 NUP88Q99567 741 aaPredicted RBP10.53□□□□□ -0.72
SDF2-207ENST00000588472 RNF208Q9H0X6 261 aa10.53□□□□□ -0.72
SDF2-207ENST00000588472 VCPKMTQ9H867 229 aa10.53□□□□□ -0.72
SDF2-207ENST00000588472 GOPCQ9HD26 462 aa10.53□□□□□ -0.72
SDF2-207ENST00000588472 TOMM22Q9NS69 142 aa10.53□□□□□ -0.72
SDF2-207ENST00000588472 HOXC10Q9NYD6 342 aa10.53□□□□□ -0.72
SDF2-207ENST00000588472 BTBD7Q9P203 1132 aa10.53□□□□□ -0.72
SDF2-207ENST00000588472 ISY1Q9ULR0 285 aaKnown RBP10.53□□□□□ -0.72
SDF2-207ENST00000588472 RABGAP1Q9Y3P9 1069 aa10.53□□□□□ -0.72
SDF2-207ENST00000588472 SPDYE16A6NNV3 312 aaPredicted RBP10.52□□□□□ -0.73
SDF2-207ENST00000588472 FOXP2O15409 715 aa10.52□□□□□ -0.73
SDF2-207ENST00000588472 PDE4AP27815 886 aa10.52□□□□□ -0.73
SDF2-207ENST00000588472 MAPK4P31152 587 aa10.52□□□□□ -0.73
SDF2-207ENST00000588472 SLC4A3P48751 1232 aa10.52□□□□□ -0.73
SDF2-207ENST00000588472 HAND2P61296 217 aa10.52□□□□□ -0.73
SDF2-207ENST00000588472 CCNA1P78396 465 aa10.52□□□□□ -0.73
SDF2-207ENST00000588472 RRP12Q5JTH9 1297 aaKnown RBP10.52□□□□□ -0.73
SDF2-207ENST00000588472 FAM83BQ5T0W9 1011 aa10.52□□□□□ -0.73
SDF2-207ENST00000588472 GPR142Q7Z601 462 aa10.52□□□□□ -0.73
SDF2-207ENST00000588472 PLEKHH3Q7Z736 793 aa10.52□□□□□ -0.73
SDF2-207ENST00000588472 ZNF589Q86UQ0 364 aaPredicted RBP10.52□□□□□ -0.73
SDF2-207ENST00000588472 SLC17A8Q8NDX2 589 aa10.52□□□□□ -0.73
SDF2-207ENST00000588472 LPAR1Q92633 364 aa10.52□□□□□ -0.73
SDF2-207ENST00000588472 NUDT12Q9BQG2 462 aa10.52□□□□□ -0.73
SDF2-207ENST00000588472 UNC93B1Q9H1C4 597 aa10.52□□□□□ -0.73
SDF2-207ENST00000588472 DIAPH3Q9NSV4 1193 aa10.52□□□□□ -0.73
SDF2-207ENST00000588472 FBXO28Q9NVF7 368 aa10.52□□□□□ -0.73
SDF2-207ENST00000588472 GJD2Q9UKL4 321 aa10.52□□□□□ -0.73
SDF2-207ENST00000588472 F5H6K3 240 aa10.51□□□□□ -0.73
SDF2-207ENST00000588472 WDR46O15213 610 aaKnown RBP10.51□□□□□ -0.73
SDF2-207ENST00000588472 RANBP6O60518 1105 aaKnown RBP10.51□□□□□ -0.73
SDF2-207ENST00000588472 FGAP02671 866 aa10.51□□□□□ -0.73
SDF2-207ENST00000588472 KLRC3Q07444 240 aa10.51□□□□□ -0.73
SDF2-207ENST00000588472 TRIM32Q13049 653 aa10.51□□□□□ -0.73
SDF2-207ENST00000588472 IRF5Q13568 498 aa10.51□□□□□ -0.73
SDF2-207ENST00000588472 LRRC47Q8N1G4 583 aaKnown RBP10.51□□□□□ -0.73
SDF2-207ENST00000588472 ATG4CQ96DT6 458 aa10.51□□□□□ -0.73
SDF2-207ENST00000588472 CEP95Q96GE4 821 aa10.51□□□□□ -0.73
SDF2-207ENST00000588472 OSBPL3Q9H4L5 887 aa10.51□□□□□ -0.73
SDF2-207ENST00000588472 RBM27Q9P2N5 1060 aaKnown RBP10.51□□□□□ -0.73
SDF2-207ENST00000588472 MTMR7Q9Y216 660 aa10.51□□□□□ -0.73
SDF2-207ENST00000588472 CCDC171Q6TFL3 1326 aa10.51□□□□□ -0.73
SDF2-207ENST00000588472 ROBO3Q96MS0 1386 aa10.51□□□□□ -0.73
SDF2-207ENST00000588472 TSPY2A6NKD2 308 aa10.5□□□□□ -0.73
SDF2-207ENST00000588472 TFRCP02786 760 aaKnown RBP10.5□□□□□ -0.73
SDF2-207ENST00000588472 HSPD1P10809 573 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms