RNA–Protein interactions for RNA: ENST00000588411.5

CIRBP-219, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-219ENST00000588411 SHISA4Q96DD7 197 aa26.07■■□□□ 1.76
CIRBP-219ENST00000588411 PORCNQ9H237 461 aa26.07■■□□□ 1.76
CIRBP-219ENST00000588411 MKI67P46013 3256 aaKnown RBP26.07■■□□□ 1.76
CIRBP-219ENST00000588411 MYH8P13535 1937 aa26.06■■□□□ 1.76
CIRBP-219ENST00000588411 SPDYE16A6NNV3 312 aaPredicted RBP26.06■■□□□ 1.76
CIRBP-219ENST00000588411 PATL2C9JE40 543 aaKnown RBP26.06■■□□□ 1.76
CIRBP-219ENST00000588411 SMIM22K7EJ46 135 aa26.06■■□□□ 1.76
CIRBP-219ENST00000588411 RGS2P41220 211 aa26.06■■□□□ 1.76
CIRBP-219ENST00000588411 ATP2B2Q01814 1243 aa26.06■■□□□ 1.76
CIRBP-219ENST00000588411 VCPKMTQ9H867 229 aa26.06■■□□□ 1.76
CIRBP-219ENST00000588411 SALL3Q9BXA9 1300 aa26.06■■□□□ 1.76
CIRBP-219ENST00000588411 DOCK3Q8IZD9 2030 aa26.05■■□□□ 1.76
CIRBP-219ENST00000588411 CNMDO75829 334 aa26.05■■□□□ 1.76
CIRBP-219ENST00000588411 SGPL1O95470 568 aa26.05■■□□□ 1.76
CIRBP-219ENST00000588411 WDR78Q5VTH9 848 aa26.05■■□□□ 1.76
CIRBP-219ENST00000588411 CLEC10AQ8IUN9 316 aa26.05■■□□□ 1.76
CIRBP-219ENST00000588411 EVI5LQ96CN4 794 aa26.05■■□□□ 1.76
CIRBP-219ENST00000588411 GOPCQ9HD26 462 aa26.05■■□□□ 1.76
CIRBP-219ENST00000588411 STAP2Q9UGK3 403 aa26.05■■□□□ 1.76
CIRBP-219ENST00000588411 IVNS1ABPQ9Y6Y0 642 aa26.05■■□□□ 1.76
CIRBP-219ENST00000588411 ROBO3Q96MS0 1386 aa26.05■■□□□ 1.76
CIRBP-219ENST00000588411 WDR46O15213 610 aaKnown RBP26.04■■□□□ 1.76
CIRBP-219ENST00000588411 EEF2P13639 858 aaKnown RBP26.04■■□□□ 1.76
CIRBP-219ENST00000588411 ZMYM1Q5SVZ6 1142 aa26.04■■□□□ 1.76
CIRBP-219ENST00000588411 POTEEQ6S8J3 1075 aa26.04■■□□□ 1.76
CIRBP-219ENST00000588411 SIAH1Q8IUQ4 282 aa26.04■■□□□ 1.76
CIRBP-219ENST00000588411 MB21D1Q8N884 522 aa26.04■■□□□ 1.76
CIRBP-219ENST00000588411 DEFB118Q96PH6 123 aa26.04■■□□□ 1.76
CIRBP-219ENST00000588411 PAK6Q9NQU5 681 aaPredicted RBP26.04■■□□□ 1.76
CIRBP-219ENST00000588411 TFRCP02786 760 aaKnown RBP26.03■■□□□ 1.76
CIRBP-219ENST00000588411 SLC3A2P08195 630 aaKnown RBP26.03■■□□□ 1.76
CIRBP-219ENST00000588411 ZKSCAN1P17029 563 aaPredicted RBP26.03■■□□□ 1.76
CIRBP-219ENST00000588411 PDE1AP54750 535 aa26.03■■□□□ 1.76
CIRBP-219ENST00000588411 MORN1Q5T089 497 aa26.03■■□□□ 1.76
CIRBP-219ENST00000588411 SPICE1Q8N0Z3 855 aa26.03■■□□□ 1.76
CIRBP-219ENST00000588411 APBA2Q99767 749 aa26.03■■□□□ 1.76
CIRBP-219ENST00000588411 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.03■■□□□ 1.766e-8■■□□□ 14.4
CIRBP-219ENST00000588411 EPB41L4AQ9HCS5 686 aaPredicted RBP26.03■■□□□ 1.76
CIRBP-219ENST00000588411 HMX1Q9NP08 348 aaPredicted RBP26.03■■□□□ 1.76
CIRBP-219ENST00000588411 FLOT1O75955 427 aa26.02■■□□□ 1.76
CIRBP-219ENST00000588411 FARP2O94887 1054 aaPredicted RBP26.02■■□□□ 1.76
CIRBP-219ENST00000588411 IFNL3Q8IZI9 196 aa26.02■■□□□ 1.76
CIRBP-219ENST00000588411 ZNF444Q8N0Y2 327 aaPredicted RBP26.02■■□□□ 1.76
CIRBP-219ENST00000588411 STK11IPQ8N1F8 1099 aa26.02■■□□□ 1.76
CIRBP-219ENST00000588411 TRIB2Q92519 343 aa26.02■■□□□ 1.76
CIRBP-219ENST00000588411 NAPBQ9H115 298 aa26.02■■□□□ 1.76
CIRBP-219ENST00000588411 BTBD7Q9P203 1132 aa26.02■■□□□ 1.76
CIRBP-219ENST00000588411 RPTORQ8N122 1335 aa26.02■■□□□ 1.76
CIRBP-219ENST00000588411 RASA1P20936 1047 aa26.01■■□□□ 1.75
CIRBP-219ENST00000588411 USP6NLQ92738 828 aa26.01■■□□□ 1.75
CIRBP-219ENST00000588411 SEC62Q99442 399 aaKnown RBP26.01■■□□□ 1.75
CIRBP-219ENST00000588411 HTATIP2Q9BUP3 242 aa26.01■■□□□ 1.75
CIRBP-219ENST00000588411 SLC15A5A6NIM6 579 aa26■■□□□ 1.75
CIRBP-219ENST00000588411 RAD21O60216 631 aa26■■□□□ 1.75
CIRBP-219ENST00000588411 PDE4BQ07343 736 aa26■■□□□ 1.75
CIRBP-219ENST00000588411 MAP2K5Q13163 448 aa26■■□□□ 1.75
CIRBP-219ENST00000588411 KIAA1755Q5JYT7 1200 aa26■■□□□ 1.75
CIRBP-219ENST00000588411 TICAM2Q86XR7 235 aa26■■□□□ 1.75
CIRBP-219ENST00000588411 LNPKQ9C0E8 428 aa26■■□□□ 1.75
CIRBP-219ENST00000588411 PRKAR2AP13861 404 aaKnown RBP25.99■■□□□ 1.75
CIRBP-219ENST00000588411 PTPREP23469 700 aa25.99■■□□□ 1.75
CIRBP-219ENST00000588411 DSG3P32926 999 aa25.99■■□□□ 1.75
CIRBP-219ENST00000588411 SMC5Q8IY18 1101 aa25.99■■□□□ 1.75
CIRBP-219ENST00000588411 SPATC1LQ9H0A9 340 aa25.99■■□□□ 1.75
CIRBP-219ENST00000588411 UBE2Q1Q7Z7E8 422 aa25.98■■□□□ 1.75
CIRBP-219ENST00000588411 SHCBP1Q8NEM2 672 aa25.98■■□□□ 1.75
CIRBP-219ENST00000588411 EXOC6Q8TAG9 804 aa25.98■■□□□ 1.75
CIRBP-219ENST00000588411 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.98■■□□□ 1.75
CIRBP-219ENST00000588411 CRISPLD2Q9H0B8 497 aa25.98■■□□□ 1.75
CIRBP-219ENST00000588411 NYAP2Q9P242 653 aa25.98■■□□□ 1.75
CIRBP-219ENST00000588411 GRB14Q14449 540 aa25.97■■□□□ 1.75
CIRBP-219ENST00000588411 PLS1Q14651 629 aa25.97■■□□□ 1.75
CIRBP-219ENST00000588411 MAP3K21Q5TCX8 1036 aa25.97■■□□□ 1.75
CIRBP-219ENST00000588411 SAMD1Q6SPF0 538 aaPredicted RBP25.97■■□□□ 1.75
CIRBP-219ENST00000588411 DPF3Q92784 378 aa25.97■■□□□ 1.75
CIRBP-219ENST00000588411 MOV10L1Q9BXT6 1211 aaKnown RBP25.97■■□□□ 1.75
CIRBP-219ENST00000588411 PLXNB2O15031 1838 aa25.96■■□□□ 1.75
CIRBP-219ENST00000588411 STRNO43815 780 aa25.96■■□□□ 1.75
CIRBP-219ENST00000588411 TRIM32Q13049 653 aa25.96■■□□□ 1.75
CIRBP-219ENST00000588411 MFSD14CQ5VZR4 134 aa25.96■■□□□ 1.75
CIRBP-219ENST00000588411 B4GALNT3Q6L9W6 998 aa25.96■■□□□ 1.75
CIRBP-219ENST00000588411 ATG4CQ96DT6 458 aa25.96■■□□□ 1.75
CIRBP-219ENST00000588411 HELLSQ9NRZ9 838 aa25.96■■□□□ 1.75
CIRBP-219ENST00000588411 PRDM1O75626 825 aa25.95■■□□□ 1.74
CIRBP-219ENST00000588411 PPARAQ07869 468 aa25.95■■□□□ 1.74
CIRBP-219ENST00000588411 CHD1LQ86WJ1 897 aa25.95■■□□□ 1.74
CIRBP-219ENST00000588411 ANKLE1Q8NAG6 615 aa25.95■■□□□ 1.74
CIRBP-219ENST00000588411 MROH8Q9H579 483 aa25.95■■□□□ 1.74
CIRBP-219ENST00000588411 TRIM6-TRIM34B2RNG4 842 aa25.94■■□□□ 1.74
CIRBP-219ENST00000588411 HOXC6P09630 235 aa25.94■■□□□ 1.74
CIRBP-219ENST00000588411 TSPY3P0CV98 308 aa25.94■■□□□ 1.74
CIRBP-219ENST00000588411 TSPY8P0CW00 308 aa25.94■■□□□ 1.74
CIRBP-219ENST00000588411 ERCC3P19447 782 aa25.94■■□□□ 1.74
CIRBP-219ENST00000588411 SYNPO2Q9UMS6 1093 aa25.94■■□□□ 1.74
CIRBP-219ENST00000588411 NUCB1Q02818 461 aa25.93■■□□□ 1.74
CIRBP-219ENST00000588411 CCL14Q16627 93 aa25.93■■□□□ 1.74
CIRBP-219ENST00000588411 PPP4R3BQ5MIZ7 849 aa25.93■■□□□ 1.74
CIRBP-219ENST00000588411 FAM83BQ5T0W9 1011 aa25.93■■□□□ 1.74
CIRBP-219ENST00000588411 CCDC129Q6ZRS4 1044 aa25.93■■□□□ 1.74
CIRBP-219ENST00000588411 DPP9Q86TI2 863 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms