RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 SKOR2Q2VWA4 1001 aaPredicted RBP12.19□□□□□ -0.46
CHMP1B-202ENST00000588284 FOXD4L5Q5VV16 416 aaPredicted RBP12.19□□□□□ -0.46
CHMP1B-202ENST00000588284 TMEM179Q6ZVK1 233 aa12.19□□□□□ -0.46
CHMP1B-202ENST00000588284 FBXO18Q8NFZ0 1043 aa12.19□□□□□ -0.46
CHMP1B-202ENST00000588284 FOXD4L4Q8WXT5 416 aaPredicted RBP12.19□□□□□ -0.46
CHMP1B-202ENST00000588284 MKL1Q969V6 931 aa12.19□□□□□ -0.46
CHMP1B-202ENST00000588284 CEP95Q96GE4 821 aa12.19□□□□□ -0.46
CHMP1B-202ENST00000588284 ALG1Q9BT22 464 aa12.19□□□□□ -0.46
CHMP1B-202ENST00000588284 SLC26A6Q9BXS9 759 aa12.19□□□□□ -0.46
CHMP1B-202ENST00000588284 GPRC5DQ9NZD1 345 aa12.19□□□□□ -0.46
CHMP1B-202ENST00000588284 NYAP2Q9P242 653 aa12.19□□□□□ -0.46
CHMP1B-202ENST00000588284 DDX60LQ5H9U9 1706 aaKnown RBP12.18□□□□□ -0.46
CHMP1B-202ENST00000588284 PYGBP11216 843 aa12.18□□□□□ -0.46
CHMP1B-202ENST00000588284 YBX3P16989 372 aaKnown RBP eCLIP12.18□□□□□ -0.46
CHMP1B-202ENST00000588284 MAP3K10Q02779 954 aa12.18□□□□□ -0.46
CHMP1B-202ENST00000588284 RASA3Q14644 834 aa12.18□□□□□ -0.46
CHMP1B-202ENST00000588284 GRM4Q14833 912 aa12.18□□□□□ -0.46
CHMP1B-202ENST00000588284 TBC1D10BQ4KMP7 808 aaPredicted RBP12.18□□□□□ -0.46
CHMP1B-202ENST00000588284 C9orf131Q5VYM1 1079 aa12.18□□□□□ -0.46
CHMP1B-202ENST00000588284 ATL3Q6DD88 541 aa12.18□□□□□ -0.46
CHMP1B-202ENST00000588284 TMTC3Q6ZXV5 915 aa12.18□□□□□ -0.46
CHMP1B-202ENST00000588284 SAMD7Q7Z3H4 446 aa12.18□□□□□ -0.46
CHMP1B-202ENST00000588284 APOBEC3FQ8IUX4 373 aaKnown RBP12.18□□□□□ -0.46
CHMP1B-202ENST00000588284 ANP32EQ9BTT0 268 aa12.18□□□□□ -0.46
CHMP1B-202ENST00000588284 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.18□□□□□ -0.46
CHMP1B-202ENST00000588284 GINM1Q9NU53 330 aa12.18□□□□□ -0.46
CHMP1B-202ENST00000588284 CLIP2Q9UDT6 1046 aa12.18□□□□□ -0.46
CHMP1B-202ENST00000588284 CNTNAP1P78357 1384 aa12.18□□□□□ -0.46
CHMP1B-202ENST00000588284 PALM3A6NDB9 673 aaPredicted RBP12.17□□□□□ -0.46
CHMP1B-202ENST00000588284 PARP1P09874 1014 aaKnown RBP12.17□□□□□ -0.46
CHMP1B-202ENST00000588284 NCLP19338 710 aaKnown RBP12.17□□□□□ -0.46
CHMP1B-202ENST00000588284 NBR1Q14596 966 aa12.17□□□□□ -0.46
CHMP1B-202ENST00000588284 SAFBQ15424 915 aaKnown RBP eCLIP12.17□□□□□ -0.46
CHMP1B-202ENST00000588284 MCTP1Q6DN14 999 aa12.17□□□□□ -0.46
CHMP1B-202ENST00000588284 NBPF11Q86T75 865 aa12.17□□□□□ -0.46
CHMP1B-202ENST00000588284 ZNF784Q8NCA9 323 aaPredicted RBP12.17□□□□□ -0.46
CHMP1B-202ENST00000588284 PHKBQ93100 1093 aa12.17□□□□□ -0.46
CHMP1B-202ENST00000588284 SYNPO2Q9UMS6 1093 aa12.17□□□□□ -0.46
CHMP1B-202ENST00000588284 ZC3H4Q9UPT8 1303 aaKnown RBP12.16□□□□□ -0.46
CHMP1B-202ENST00000588284 ADAMTSL1Q8N6G6 1762 aa12.16□□□□□ -0.46
CHMP1B-202ENST00000588284 DICER1Q9UPY3 1922 aaKnown RBP12.16□□□□□ -0.46
CHMP1B-202ENST00000588284 CDC37L1Q7L3B6 337 aa12.16□□□□□ -0.46
CHMP1B-202ENST00000588284 FAM177A1Q8N128 213 aaPredicted RBP12.16□□□□□ -0.46
CHMP1B-202ENST00000588284 CCDC82Q8N4S0 544 aa12.16□□□□□ -0.46
CHMP1B-202ENST00000588284 ZNF396Q96N95 335 aaPredicted RBP12.16□□□□□ -0.46
CHMP1B-202ENST00000588284 TMEM39BQ9GZU3 492 aa12.16□□□□□ -0.46
CHMP1B-202ENST00000588284 DNAJC18Q9H819 358 aa12.16□□□□□ -0.46
CHMP1B-202ENST00000588284 ADARB2Q9NS39 739 aaKnown RBP12.16□□□□□ -0.46
CHMP1B-202ENST00000588284 PGAP2Q9UHJ9 254 aa12.16□□□□□ -0.46
CHMP1B-202ENST00000588284 HACL1Q9UJ83 578 aa12.16□□□□□ -0.46
CHMP1B-202ENST00000588284 CFAP45Q9UL16 551 aa12.16□□□□□ -0.46
CHMP1B-202ENST00000588284 PPP2R3BQ9Y5P8 575 aa12.16□□□□□ -0.46
CHMP1B-202ENST00000588284 V9GY48 417 aaPredicted RBP12.16□□□□□ -0.46
CHMP1B-202ENST00000588284 SHTN1A0MZ66 631 aa12.15□□□□□ -0.46
CHMP1B-202ENST00000588284 KLRF2D3W0D1 207 aa12.15□□□□□ -0.46
CHMP1B-202ENST00000588284 DTNBO60941 627 aa12.15□□□□□ -0.46
CHMP1B-202ENST00000588284 DDNO94850 711 aaPredicted RBP12.15□□□□□ -0.46
CHMP1B-202ENST00000588284 CHRM1P11229 460 aaPredicted RBP12.15□□□□□ -0.46
CHMP1B-202ENST00000588284 KRT85P78386 507 aa12.15□□□□□ -0.46
CHMP1B-202ENST00000588284 FUT2Q10981 343 aa12.15□□□□□ -0.46
CHMP1B-202ENST00000588284 ASPRV1Q53RT3 343 aa12.15□□□□□ -0.46
CHMP1B-202ENST00000588284 DCAF15Q66K64 600 aa12.15□□□□□ -0.46
CHMP1B-202ENST00000588284 KRT40Q6A162 431 aa12.15□□□□□ -0.46
CHMP1B-202ENST00000588284 BRAPQ7Z569 592 aa12.15□□□□□ -0.46
CHMP1B-202ENST00000588284 SRBD1Q8N5C6 995 aaKnown RBP12.15□□□□□ -0.46
CHMP1B-202ENST00000588284 ZNF579Q8NAF0 562 aaKnown RBP12.15□□□□□ -0.46
CHMP1B-202ENST00000588284 SCAND2PQ9GZW5 306 aaPredicted RBP12.15□□□□□ -0.46
CHMP1B-202ENST00000588284 DEFB129Q9H1M3 183 aa12.15□□□□□ -0.46
CHMP1B-202ENST00000588284 MAD2L2Q9UI95 211 aa12.15□□□□□ -0.46
CHMP1B-202ENST00000588284 PPFIA3O75145 1194 aa12.14□□□□□ -0.47
CHMP1B-202ENST00000588284 PLEKHA8P1O95397 391 aa12.14□□□□□ -0.47
CHMP1B-202ENST00000588284 EEF2P13639 858 aaKnown RBP12.14□□□□□ -0.47
CHMP1B-202ENST00000588284 EPS15P42566 896 aa12.14□□□□□ -0.47
CHMP1B-202ENST00000588284 ATP2B2Q01814 1243 aa12.14□□□□□ -0.47
CHMP1B-202ENST00000588284 ICA1Q05084 483 aa12.14□□□□□ -0.47
CHMP1B-202ENST00000588284 RESTQ13127 1097 aa12.14□□□□□ -0.47
CHMP1B-202ENST00000588284 GNL2Q13823 731 aaKnown RBP12.14□□□□□ -0.47
CHMP1B-202ENST00000588284 SEPT2Q15019 361 aa12.14□□□□□ -0.47
CHMP1B-202ENST00000588284 SUPT20HL1Q3ZLR7 823 aa12.14□□□□□ -0.47
CHMP1B-202ENST00000588284 GPATCH4Q5T3I0 446 aaKnown RBP12.14□□□□□ -0.47
CHMP1B-202ENST00000588284 FERMT3Q86UX7 667 aa12.14□□□□□ -0.47
CHMP1B-202ENST00000588284 SPZ1Q9BXG8 430 aa12.14□□□□□ -0.47
CHMP1B-202ENST00000588284 SH2D4AQ9H788 454 aa12.14□□□□□ -0.47
CHMP1B-202ENST00000588284 ARHGEF10LQ9HCE6 1279 aa12.14□□□□□ -0.47
CHMP1B-202ENST00000588284 PITPNM2Q9BZ72 1349 aa12.13□□□□□ -0.47
CHMP1B-202ENST00000588284 SBF1O95248 1867 aa12.13□□□□□ -0.47
CHMP1B-202ENST00000588284 FAM196BA6NMK8 535 aa12.13□□□□□ -0.47
CHMP1B-202ENST00000588284 PRPF40AO75400 957 aaKnown RBP12.13□□□□□ -0.47
CHMP1B-202ENST00000588284 EGFRP00533 1210 aa12.13□□□□□ -0.47
CHMP1B-202ENST00000588284 GH2P01242 217 aa12.13□□□□□ -0.47
CHMP1B-202ENST00000588284 ASNSP08243 561 aa12.13□□□□□ -0.47
CHMP1B-202ENST00000588284 SNHG28P0DPA3 235 aa12.13□□□□□ -0.47
CHMP1B-202ENST00000588284 PDHBP11177 359 aa12.13□□□□□ -0.47
CHMP1B-202ENST00000588284 CAP2P40123 477 aa12.13□□□□□ -0.47
CHMP1B-202ENST00000588284 GUCY1B3Q02153 619 aa12.13□□□□□ -0.47
CHMP1B-202ENST00000588284 PFKFB3Q16875 520 aaPredicted RBP12.13□□□□□ -0.47
CHMP1B-202ENST00000588284 ANGEL2Q5VTE6 544 aaKnown RBP12.13□□□□□ -0.47
CHMP1B-202ENST00000588284 CMTR1Q8N1G2 835 aaKnown RBP12.13□□□□□ -0.47
CHMP1B-202ENST00000588284 DCAF4Q8WV16 495 aa12.13□□□□□ -0.47
CHMP1B-202ENST00000588284 TEPSINQ96N21 525 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms