RNA–Protein interactions for RNA: ENST00000588071.5

CCDC130-208, Transcript of coiled-coil domain containing 130, humanhuman

TSL 5

Gene CCDC130, Length 1,157 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-208ENST00000588071 TMEM88BA6NKF7 163 aa16.51■□□□□ 0.23
CCDC130-208ENST00000588071 USP17L10C9JJH3 530 aa16.51■□□□□ 0.23
CCDC130-208ENST00000588071 ZBTB43O43298 467 aa16.51■□□□□ 0.23
CCDC130-208ENST00000588071 CD2BP2O95400 341 aaKnown RBP16.51■□□□□ 0.23
CCDC130-208ENST00000588071 CALM1P0DP23 149 aa16.51■□□□□ 0.23
CCDC130-208ENST00000588071 CALM2P0DP24 149 aa16.51■□□□□ 0.23
CCDC130-208ENST00000588071 CALM3P0DP25 149 aa16.51■□□□□ 0.23
CCDC130-208ENST00000588071 ECE1P42892 770 aa16.51■□□□□ 0.23
CCDC130-208ENST00000588071 PPATQ06203 517 aa16.51■□□□□ 0.23
CCDC130-208ENST00000588071 CHMP4CQ96CF2 233 aa16.51■□□□□ 0.23
CCDC130-208ENST00000588071 ZNF274Q96GC6 653 aaPredicted RBP16.51■□□□□ 0.23
CCDC130-208ENST00000588071 WDR18Q9BV38 432 aa16.51■□□□□ 0.23
CCDC130-208ENST00000588071 GOPCQ9HD26 462 aa16.51■□□□□ 0.23
CCDC130-208ENST00000588071 ABT1Q9ULW3 272 aaKnown RBP16.51■□□□□ 0.23
CCDC130-208ENST00000588071 TMX2Q9Y320 296 aa16.51■□□□□ 0.23
CCDC130-208ENST00000588071 GOLGA8BA8MQT2 603 aa16.5■□□□□ 0.23
CCDC130-208ENST00000588071 PDIA3P30101 505 aaKnown RBP16.5■□□□□ 0.23
CCDC130-208ENST00000588071 EVCP57679 992 aa16.5■□□□□ 0.23
CCDC130-208ENST00000588071 STK3Q13188 491 aa16.5■□□□□ 0.23
CCDC130-208ENST00000588071 BECN1Q14457 450 aa16.5■□□□□ 0.23
CCDC130-208ENST00000588071 ZYXQ15942 572 aaKnown RBP16.5■□□□□ 0.23
CCDC130-208ENST00000588071 SLFN13Q68D06 897 aa16.5■□□□□ 0.23
CCDC130-208ENST00000588071 APOA5Q6Q788 366 aa16.5■□□□□ 0.23
CCDC130-208ENST00000588071 MICU3Q86XE3 530 aa16.5■□□□□ 0.23
CCDC130-208ENST00000588071 RAB11FIP4Q86YS3 637 aa16.5■□□□□ 0.23
CCDC130-208ENST00000588071 OPTNQ96CV9 577 aa16.5■□□□□ 0.23
CCDC130-208ENST00000588071 OTUD5Q96G74 571 aa16.5■□□□□ 0.23
CCDC130-208ENST00000588071 MYL10Q9BUA6 226 aa16.5■□□□□ 0.23
CCDC130-208ENST00000588071 SLKQ9H2G2 1235 aaPredicted RBP16.5■□□□□ 0.23
CCDC130-208ENST00000588071 SYNPO2Q9UMS6 1093 aa16.5■□□□□ 0.23
CCDC130-208ENST00000588071 AFG3L2Q9Y4W6 797 aa16.5■□□□□ 0.23
CCDC130-208ENST00000588071 SPDYE5A6NIY4 337 aa16.49■□□□□ 0.23
CCDC130-208ENST00000588071 TRIM75PA6NK02 468 aa16.49■□□□□ 0.23
CCDC130-208ENST00000588071 C19orf81C9J6K1 198 aa16.49■□□□□ 0.23
CCDC130-208ENST00000588071 F5H6K3 240 aa16.49■□□□□ 0.23
CCDC130-208ENST00000588071 DDAH1O94760 285 aa16.49■□□□□ 0.23
CCDC130-208ENST00000588071 RXRAP19793 462 aa16.49■□□□□ 0.23
CCDC130-208ENST00000588071 METAP2P50579 478 aaKnown RBP eCLIP16.49■□□□□ 0.23
CCDC130-208ENST00000588071 USP14P54578 494 aa16.49■□□□□ 0.23
CCDC130-208ENST00000588071 BACE1P56817 501 aa16.49■□□□□ 0.23
CCDC130-208ENST00000588071 CCT2P78371 535 aaKnown RBP16.49■□□□□ 0.23
CCDC130-208ENST00000588071 KLRC3Q07444 240 aa16.49■□□□□ 0.23
CCDC130-208ENST00000588071 ME3Q16798 604 aa16.49■□□□□ 0.23
CCDC130-208ENST00000588071 USP17L2Q6R6M4 530 aa16.49■□□□□ 0.23
CCDC130-208ENST00000588071 CCDC144CPQ8IYA2 1237 aa16.49■□□□□ 0.23
CCDC130-208ENST00000588071 CTCFLQ8NI51 663 aaPredicted RBP16.49■□□□□ 0.23
CCDC130-208ENST00000588071 CNKSR2Q8WXI2 1034 aa16.49■□□□□ 0.23
CCDC130-208ENST00000588071 SH2B1Q9NRF2 756 aaPredicted RBP16.49■□□□□ 0.23
CCDC130-208ENST00000588071 ISY1Q9ULR0 285 aaKnown RBP16.49■□□□□ 0.23
CCDC130-208ENST00000588071 GOLGA8AA7E2F4 631 aa16.48■□□□□ 0.23
CCDC130-208ENST00000588071 PARP1P09874 1014 aaKnown RBP16.48■□□□□ 0.23
CCDC130-208ENST00000588071 SLC1A4P43007 532 aa16.48■□□□□ 0.23
CCDC130-208ENST00000588071 ZNF157P51786 506 aaPredicted RBP16.48■□□□□ 0.23
CCDC130-208ENST00000588071 TROAPQ12815 778 aa16.48■□□□□ 0.23
CCDC130-208ENST00000588071 PPIL2Q13356 520 aa16.48■□□□□ 0.23
CCDC130-208ENST00000588071 MTMR2Q13614 643 aa16.48■□□□□ 0.23
CCDC130-208ENST00000588071 SAPCD2Q86UD0 394 aa16.48■□□□□ 0.23
CCDC130-208ENST00000588071 FANCBQ8NB91 859 aa16.48■□□□□ 0.23
CCDC130-208ENST00000588071 GMCL1P1Q8NEA9 526 aa16.48■□□□□ 0.23
CCDC130-208ENST00000588071 TMX3Q96JJ7 454 aa16.48■□□□□ 0.23
CCDC130-208ENST00000588071 KIAA1683Q9H0B3 1180 aa16.48■□□□□ 0.23
CCDC130-208ENST00000588071 VCPKMTQ9H867 229 aa16.48■□□□□ 0.23
CCDC130-208ENST00000588071 TMOD4Q9NZQ9 345 aa16.48■□□□□ 0.23
CCDC130-208ENST00000588071 TLL2Q9Y6L7 1015 aa16.48■□□□□ 0.23
CCDC130-208ENST00000588071 CCDC196A0A1B0GTZ2 297 aa16.47■□□□□ 0.23
CCDC130-208ENST00000588071 K7ELQ4 463 aaPredicted RBP16.47■□□□□ 0.23
CCDC130-208ENST00000588071 CXCL11O14625 94 aa16.47■□□□□ 0.23
CCDC130-208ENST00000588071 IRF6O14896 467 aa16.47■□□□□ 0.23
CCDC130-208ENST00000588071 PFKFB2O60825 505 aa16.47■□□□□ 0.23
CCDC130-208ENST00000588071 KIF5BP33176 963 aa16.47■□□□□ 0.23
CCDC130-208ENST00000588071 RCAN1P53805 252 aa16.47■□□□□ 0.23
CCDC130-208ENST00000588071 RTN1Q16799 776 aa16.47■□□□□ 0.23
CCDC130-208ENST00000588071 CCDC96Q2M329 555 aa16.47■□□□□ 0.23
CCDC130-208ENST00000588071 RGMBQ6NW40 437 aa16.47■□□□□ 0.23
CCDC130-208ENST00000588071 SPICE1Q8N0Z3 855 aa16.47■□□□□ 0.23
CCDC130-208ENST00000588071 NECAB1Q8N987 351 aa16.47■□□□□ 0.23
CCDC130-208ENST00000588071 WNK4Q96J92 1243 aa16.47■□□□□ 0.23
CCDC130-208ENST00000588071 LARGE1O95461 756 aa16.46■□□□□ 0.23
CCDC130-208ENST00000588071 NDUFB10O96000 172 aa16.46■□□□□ 0.23
CCDC130-208ENST00000588071 PDHBP11177 359 aa16.46■□□□□ 0.23
CCDC130-208ENST00000588071 APLP1P51693 650 aa16.46■□□□□ 0.23
CCDC130-208ENST00000588071 HMGCS2P54868 508 aa16.46■□□□□ 0.23
CCDC130-208ENST00000588071 GRM4Q14833 912 aa16.46■□□□□ 0.23
CCDC130-208ENST00000588071 PPP2R5BQ15173 497 aa16.46■□□□□ 0.23
CCDC130-208ENST00000588071 DCAF4Q8WV16 495 aa16.46■□□□□ 0.23
CCDC130-208ENST00000588071 LPAR1Q92633 364 aa16.46■□□□□ 0.23
CCDC130-208ENST00000588071 MAP3K14Q99558 947 aa16.46■□□□□ 0.23
CCDC130-208ENST00000588071 GPCPD1Q9NPB8 672 aa16.46■□□□□ 0.23
CCDC130-208ENST00000588071 EMILIN3Q9NT22 766 aa16.46■□□□□ 0.23
CCDC130-208ENST00000588071 RBM28Q9NW13 759 aaKnown RBP16.46■□□□□ 0.23
CCDC130-208ENST00000588071 HPS5Q9UPZ3 1129 aa16.46■□□□□ 0.23
CCDC130-208ENST00000588071 PTPRFP10586 1907 aa16.46■□□□□ 0.23
CCDC130-208ENST00000588071 FRMPD2Q68DX3 1309 aaPredicted RBP16.45■□□□□ 0.22
CCDC130-208ENST00000588071 CPLX1O14810 134 aa16.45■□□□□ 0.22
CCDC130-208ENST00000588071 DHX16O60231 1041 aaKnown RBP16.45■□□□□ 0.22
CCDC130-208ENST00000588071 BMP3P12645 472 aa16.45■□□□□ 0.22
CCDC130-208ENST00000588071 GNAQP50148 359 aa16.45■□□□□ 0.22
CCDC130-208ENST00000588071 SCRN1Q12765 414 aa16.45■□□□□ 0.22
CCDC130-208ENST00000588071 MKRN3Q13064 507 aaKnown RBP16.45■□□□□ 0.22
CCDC130-208ENST00000588071 ASPRV1Q53RT3 343 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms