RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 APBA2Q99767 749 aa22.61■■□□□ 1.21
TRIM47-205ENST00000587774 CWC22Q9HCG8 908 aaKnown RBP22.61■■□□□ 1.21
TRIM47-205ENST00000587774 SLC4A4Q9Y6R1 1079 aa22.61■■□□□ 1.21
TRIM47-205ENST00000587774 USP17L12C9JPN9 530 aa22.6■■□□□ 1.21
TRIM47-205ENST00000587774 USP17L21D6R901 530 aa22.6■■□□□ 1.21
TRIM47-205ENST00000587774 FXR1P51114 621 aaKnown RBP eCLIP22.6■■□□□ 1.21
TRIM47-205ENST00000587774 KIAA1755Q5JYT7 1200 aa22.6■■□□□ 1.21
TRIM47-205ENST00000587774 CHRDL2Q6WN34 429 aa22.6■■□□□ 1.21
TRIM47-205ENST00000587774 AMOTL1Q8IY63 956 aa22.6■■□□□ 1.21
TRIM47-205ENST00000587774 TRMT44Q8IYL2 757 aaKnown RBP22.6■■□□□ 1.21
TRIM47-205ENST00000587774 ANKLE1Q8NAG6 615 aa22.6■■□□□ 1.21
TRIM47-205ENST00000587774 TANGO6Q9C0B7 1094 aa22.6■■□□□ 1.21
TRIM47-205ENST00000587774 ICA1Q05084 483 aa22.59■■□□□ 1.21
TRIM47-205ENST00000587774 WDR78Q5VTH9 848 aa22.59■■□□□ 1.21
TRIM47-205ENST00000587774 C16orf86Q6ZW13 317 aa22.59■■□□□ 1.21
TRIM47-205ENST00000587774 DDRGK1Q96HY6 314 aa22.59■■□□□ 1.21
TRIM47-205ENST00000587774 MCM3APO60318 1980 aa22.59■■□□□ 1.21
TRIM47-205ENST00000587774 CDK8P49336 464 aa22.58■■□□□ 1.21
TRIM47-205ENST00000587774 CACNB2Q08289 660 aaPredicted RBP22.58■■□□□ 1.21
TRIM47-205ENST00000587774 MAP2K5Q13163 448 aa22.58■■□□□ 1.21
TRIM47-205ENST00000587774 NECAB2Q7Z6G3 386 aa22.58■■□□□ 1.21
TRIM47-205ENST00000587774 SIAH1Q8IUQ4 282 aa22.58■■□□□ 1.21
TRIM47-205ENST00000587774 GPATCH3Q96I76 525 aa22.58■■□□□ 1.21
TRIM47-205ENST00000587774 ARHGEF10LQ9HCE6 1279 aa22.58■■□□□ 1.21
TRIM47-205ENST00000587774 PCDH10Q9P2E7 1040 aa22.58■■□□□ 1.21
TRIM47-205ENST00000587774 NR2E3Q9Y5X4 410 aa22.58■■□□□ 1.21
TRIM47-205ENST00000587774 EVI5O60447 810 aa22.57■■□□□ 1.2
TRIM47-205ENST00000587774 GLRX3O76003 335 aaKnown RBP22.57■■□□□ 1.2
TRIM47-205ENST00000587774 MNX1P50219 401 aaPredicted RBP22.57■■□□□ 1.2
TRIM47-205ENST00000587774 CTR9Q6PD62 1173 aa22.57■■□□□ 1.2
TRIM47-205ENST00000587774 KBTBD3Q8NAB2 608 aa22.57■■□□□ 1.2
TRIM47-205ENST00000587774 OGDHLQ9ULD0 1010 aa22.57■■□□□ 1.2
TRIM47-205ENST00000587774 PTPREP23469 700 aa22.56■■□□□ 1.2
TRIM47-205ENST00000587774 CCND3P30281 292 aaPredicted RBP22.56■■□□□ 1.2
TRIM47-205ENST00000587774 GRB14Q14449 540 aa22.56■■□□□ 1.2
TRIM47-205ENST00000587774 COG2Q14746 738 aa22.56■■□□□ 1.2
TRIM47-205ENST00000587774 SPICE1Q8N0Z3 855 aa22.56■■□□□ 1.2
TRIM47-205ENST00000587774 LPAR1Q92633 364 aa22.56■■□□□ 1.2
TRIM47-205ENST00000587774 CCDC17Q96LX7 622 aa22.56■■□□□ 1.2
TRIM47-205ENST00000587774 SH2D4AQ9H788 454 aa22.56■■□□□ 1.2
TRIM47-205ENST00000587774 RBM27Q9P2N5 1060 aaKnown RBP22.56■■□□□ 1.2
TRIM47-205ENST00000587774 ARPP21Q9UBL0 812 aaPredicted RBP22.56■■□□□ 1.2
TRIM47-205ENST00000587774 TMX2Q9Y320 296 aa22.56■■□□□ 1.2
TRIM47-205ENST00000587774 ROBO3Q96MS0 1386 aa22.55■■□□□ 1.2
TRIM47-205ENST00000587774 SLC15A5A6NIM6 579 aa22.55■■□□□ 1.2
TRIM47-205ENST00000587774 STRBPQ96SI9 672 aaKnown RBP22.55■■□□□ 1.2
TRIM47-205ENST00000587774 VCPKMTQ9H867 229 aa22.55■■□□□ 1.2
TRIM47-205ENST00000587774 FLRT1Q9NZU1 646 aa22.55■■□□□ 1.2
TRIM47-205ENST00000587774 PCDHB15Q9Y5E8 787 aa22.55■■□□□ 1.2
TRIM47-205ENST00000587774 IVNS1ABPQ9Y6Y0 642 aa22.55■■□□□ 1.2
TRIM47-205ENST00000587774 LTBP2Q14767 1821 aa22.54■■□□□ 1.2
TRIM47-205ENST00000587774 APPBP2Q92624 585 aa22.54■■□□□ 1.2
TRIM47-205ENST00000587774 OSBP2Q969R2 916 aa22.54■■□□□ 1.2
TRIM47-205ENST00000587774 MOV10L1Q9BXT6 1211 aaKnown RBP22.54■■□□□ 1.2
TRIM47-205ENST00000587774 NBPF3Q9H094 633 aa22.54■■□□□ 1.2
TRIM47-205ENST00000587774 HOXC10Q9NYD6 342 aa22.54■■□□□ 1.2
TRIM47-205ENST00000587774 LAMA2P24043 3122 aaKnown RBP22.54■■□□□ 1.2
TRIM47-205ENST00000587774 FLOT1O75955 427 aa22.53■■□□□ 1.2
TRIM47-205ENST00000587774 SPATC1LQ9H0A9 340 aa22.53■■□□□ 1.2
TRIM47-205ENST00000587774 PRO3102Q9H379 93 aa22.53■■□□□ 1.2
TRIM47-205ENST00000587774 GSG1L2A8MUP6 293 aa22.52■■□□□ 1.2
TRIM47-205ENST00000587774 WDR46O15213 610 aaKnown RBP22.52■■□□□ 1.2
TRIM47-205ENST00000587774 HOXC6P09630 235 aa22.52■■□□□ 1.2
TRIM47-205ENST00000587774 EEF2P13639 858 aaKnown RBP22.52■■□□□ 1.2
TRIM47-205ENST00000587774 NPLOC4Q8TAT6 608 aa22.52■■□□□ 1.2
TRIM47-205ENST00000587774 ATG4CQ96DT6 458 aa22.52■■□□□ 1.2
TRIM47-205ENST00000587774 C11orf49Q9H6J7 331 aa22.52■■□□□ 1.2
TRIM47-205ENST00000587774 PFASO15067 1338 aa22.52■■□□□ 1.2
TRIM47-205ENST00000587774 RNF113AO15541 343 aaKnown RBP22.51■■□□□ 1.19
TRIM47-205ENST00000587774 GPAA1O43292 621 aa22.51■■□□□ 1.19
TRIM47-205ENST00000587774 DSG3P32926 999 aa22.51■■□□□ 1.19
TRIM47-205ENST00000587774 RRP1P56182 461 aaKnown RBP22.51■■□□□ 1.19
TRIM47-205ENST00000587774 ATP2B2Q01814 1243 aa22.51■■□□□ 1.19
TRIM47-205ENST00000587774 SBK1Q52WX2 424 aa22.51■■□□□ 1.19
TRIM47-205ENST00000587774 LHX8Q68G74 356 aa22.51■■□□□ 1.19
TRIM47-205ENST00000587774 C7orf61Q8IZ16 206 aa22.51■■□□□ 1.19
TRIM47-205ENST00000587774 MB21D1Q8N884 522 aa22.51■■□□□ 1.19
TRIM47-205ENST00000587774 EPB41L4AQ9HCS5 686 aaPredicted RBP22.51■■□□□ 1.19
TRIM47-205ENST00000587774 TTC41PQ6P2S7 1318 aa22.51■■□□□ 1.19
TRIM47-205ENST00000587774 M0R2C6 588 aa22.5■■□□□ 1.19
TRIM47-205ENST00000587774 ZFYP08048 801 aaPredicted RBP22.5■■□□□ 1.19
TRIM47-205ENST00000587774 ERCC3P19447 782 aa22.5■■□□□ 1.19
TRIM47-205ENST00000587774 MFSD14CQ5VZR4 134 aa22.5■■□□□ 1.19
TRIM47-205ENST00000587774 GIMAP6Q6P9H5 292 aa22.5■■□□□ 1.19
TRIM47-205ENST00000587774 SAMD1Q6SPF0 538 aaPredicted RBP22.5■■□□□ 1.19
TRIM47-205ENST00000587774 STK11IPQ8N1F8 1099 aa22.5■■□□□ 1.19
TRIM47-205ENST00000587774 SHCBP1Q8NEM2 672 aa22.5■■□□□ 1.19
TRIM47-205ENST00000587774 PI4K2BQ8TCG2 481 aa22.5■■□□□ 1.19
TRIM47-205ENST00000587774 OTUD7AQ8TE49 926 aaPredicted RBP22.5■■□□□ 1.19
TRIM47-205ENST00000587774 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.5■■□□□ 1.19
TRIM47-205ENST00000587774 KANSL2Q9H9L4 492 aa22.5■■□□□ 1.19
TRIM47-205ENST00000587774 RASA1P20936 1047 aa22.49■■□□□ 1.19
TRIM47-205ENST00000587774 ADORA2AP29274 412 aa22.49■■□□□ 1.19
TRIM47-205ENST00000587774 PLS1Q14651 629 aa22.49■■□□□ 1.19
TRIM47-205ENST00000587774 LAMA4Q16363 1823 aa22.48■■□□□ 1.19
TRIM47-205ENST00000587774 MINDY4BA8MYZ0 360 aa22.48■■□□□ 1.19
TRIM47-205ENST00000587774 CYP2C19P33261 490 aa22.48■■□□□ 1.19
TRIM47-205ENST00000587774 GOPCQ9HD26 462 aa22.48■■□□□ 1.19
TRIM47-205ENST00000587774 FBXO28Q9NVF7 368 aa22.48■■□□□ 1.19
TRIM47-205ENST00000587774 STRNO43815 780 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms