RNA–Protein interactions for RNA: ENST00000587509.5

PRKCSH-206, Transcript of protein kinase C substrate 80K-H, human

TSL 4

Gene PRKCSH, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCSH-206	ENST00000587509	NMI	Q13287	307 aa	Predicted RBP	13.92	□□□□□ -0.18
PRKCSH-206	ENST00000587509	IRF5	Q13568	498 aa		13.92	□□□□□ -0.18
PRKCSH-206	ENST00000587509	LBX2	Q6XYB7	198 aa		13.92	□□□□□ -0.18
PRKCSH-206	ENST00000587509	CATSPERG	Q6ZRH7	1159 aa		13.92	□□□□□ -0.18
PRKCSH-206	ENST00000587509	ZNF333	Q96JL9	665 aa		13.92	□□□□□ -0.18
PRKCSH-206	ENST00000587509	HOXC10	Q9NYD6	342 aa		13.92	□□□□□ -0.18
PRKCSH-206	ENST00000587509	BIN2	Q9UBW5	565 aa	Predicted RBP	13.92	□□□□□ -0.18
PRKCSH-206	ENST00000587509	RAD50	Q92878	1312 aa		13.91	□□□□□ -0.18
PRKCSH-206	ENST00000587509	TSPY2	A6NKD2	308 aa		13.91	□□□□□ -0.18
PRKCSH-206	ENST00000587509	RAD21	O60216	631 aa		13.91	□□□□□ -0.18
PRKCSH-206	ENST00000587509	FLOT1	O75955	427 aa		13.91	□□□□□ -0.18
PRKCSH-206	ENST00000587509	TTLL1	O95922	423 aa		13.91	□□□□□ -0.18
PRKCSH-206	ENST00000587509	EEF2	P13639	858 aa	Known RBP	13.91	□□□□□ -0.18
PRKCSH-206	ENST00000587509	COG2	Q14746	738 aa		13.91	□□□□□ -0.18
PRKCSH-206	ENST00000587509	ALX1	Q15699	326 aa		13.91	□□□□□ -0.18
PRKCSH-206	ENST00000587509	CCDC129	Q6ZRS4	1044 aa		13.91	□□□□□ -0.18
PRKCSH-206	ENST00000587509	CENPQ	Q7L2Z9	268 aa	Predicted RBP	13.91	□□□□□ -0.18
PRKCSH-206	ENST00000587509	STK11IP	Q8N1F8	1099 aa		13.91	□□□□□ -0.18
PRKCSH-206	ENST00000587509	RUFY2	Q8WXA3	655 aa		13.91	□□□□□ -0.18
PRKCSH-206	ENST00000587509	FAM227B	Q96M60	508 aa		13.91	□□□□□ -0.18
PRKCSH-206	ENST00000587509	P2RX7	Q99572	595 aa	Known RBP	13.91	□□□□□ -0.18
PRKCSH-206	ENST00000587509	RNF41	Q9H4P4	317 aa	Predicted RBP	13.91	□□□□□ -0.18
PRKCSH-206	ENST00000587509	NYAP2	Q9P242	653 aa		13.91	□□□□□ -0.18
PRKCSH-206	ENST00000587509	IVNS1ABP	Q9Y6Y0	642 aa		13.91	□□□□□ -0.18
PRKCSH-206	ENST00000587509	FLT3LG	P49771	235 aa		13.9	□□□□□ -0.18
PRKCSH-206	ENST00000587509	TTC22	Q5TAA0	569 aa		13.9	□□□□□ -0.18
PRKCSH-206	ENST00000587509	TRMT44	Q8IYL2	757 aa	Known RBP	13.9	□□□□□ -0.18
PRKCSH-206	ENST00000587509	NKX2-3	Q8TAU0	364 aa		13.9	□□□□□ -0.18
PRKCSH-206	ENST00000587509	PXYLP1	Q8TE99	480 aa		13.9	□□□□□ -0.18
PRKCSH-206	ENST00000587509	TOMM22	Q9NS69	142 aa		13.9	□□□□□ -0.18
PRKCSH-206	ENST00000587509	ANAPC4	Q9UJX5	808 aa		13.9	□□□□□ -0.18
PRKCSH-206	ENST00000587509	MGAM	O43451	1857 aa		13.9	□□□□□ -0.18
PRKCSH-206	ENST00000587509		A0A1W2PRG0	241 aa		13.89	□□□□□ -0.19
PRKCSH-206	ENST00000587509	SPDYE16	A6NNV3	312 aa	Predicted RBP	13.89	□□□□□ -0.19
PRKCSH-206	ENST00000587509	ADCY3	O60266	1144 aa		13.89	□□□□□ -0.19
PRKCSH-206	ENST00000587509	PRDM1	O75626	825 aa		13.89	□□□□□ -0.19
PRKCSH-206	ENST00000587509	HSPD1	P10809	573 aa	Known RBP	13.89	□□□□□ -0.19
PRKCSH-206	ENST00000587509	CAPN2	P17655	700 aa		13.89	□□□□□ -0.19
PRKCSH-206	ENST00000587509	COPB2	P35606	906 aa		13.89	□□□□□ -0.19
PRKCSH-206	ENST00000587509	RGS19	P49795	217 aa		13.89	□□□□□ -0.19
PRKCSH-206	ENST00000587509	CWC27	Q6UX04	472 aa	Known RBP	13.89	□□□□□ -0.19
PRKCSH-206	ENST00000587509	CLEC10A	Q8IUN9	316 aa		13.89	□□□□□ -0.19
PRKCSH-206	ENST00000587509	SPICE1	Q8N0Z3	855 aa		13.89	□□□□□ -0.19
PRKCSH-206	ENST00000587509	NUDT12	Q9BQG2	462 aa		13.89	□□□□□ -0.19
PRKCSH-206	ENST00000587509	CTNNA3	Q9UI47	895 aa		13.89	□□□□□ -0.19
PRKCSH-206	ENST00000587509	CTDP1	Q9Y5B0	961 aa	Predicted RBP	13.89	□□□□□ -0.19
PRKCSH-206	ENST00000587509	GREB1L	Q9C091	1923 aa	Predicted RBP	13.89	□□□□□ -0.19
PRKCSH-206	ENST00000587509	ZSWIM8	A7E2V4	1837 aa		13.89	□□□□□ -0.19
PRKCSH-206	ENST00000587509	ORC4	O43929	436 aa		13.88	□□□□□ -0.19
PRKCSH-206	ENST00000587509	HMGCR	P04035	888 aa		13.88	□□□□□ -0.19
PRKCSH-206	ENST00000587509	CTGF	P29279	349 aa		13.88	□□□□□ -0.19
PRKCSH-206	ENST00000587509	RGS2	P41220	211 aa		13.88	□□□□□ -0.19
PRKCSH-206	ENST00000587509	WDR78	Q5VTH9	848 aa		13.88	□□□□□ -0.19
PRKCSH-206	ENST00000587509	PLEKHH3	Q7Z736	793 aa		13.88	□□□□□ -0.19
PRKCSH-206	ENST00000587509	NEDD1	Q8NHV4	660 aa		13.88	□□□□□ -0.19
PRKCSH-206	ENST00000587509	SH3TC2	Q8TF17	1288 aa		13.88	□□□□□ -0.19
PRKCSH-206	ENST00000587509	CEP95	Q96GE4	821 aa		13.88	□□□□□ -0.19
PRKCSH-206	ENST00000587509	MTMR4	Q9NYA4	1195 aa		13.88	□□□□□ -0.19
PRKCSH-206	ENST00000587509	RBBP6	Q7Z6E9	1792 aa	Known RBP	13.88	□□□□□ -0.19
PRKCSH-206	ENST00000587509	RANBP6	O60518	1105 aa	Known RBP	13.87	□□□□□ -0.19
PRKCSH-206	ENST00000587509	CAP1	Q01518	475 aa		13.87	□□□□□ -0.19
PRKCSH-206	ENST00000587509	TFAP4	Q01664	338 aa		13.87	□□□□□ -0.19
PRKCSH-206	ENST00000587509	IMMT	Q16891	758 aa	Known RBP	13.87	□□□□□ -0.19
PRKCSH-206	ENST00000587509	VPS53	Q5VIR6	699 aa		13.87	□□□□□ -0.19
PRKCSH-206	ENST00000587509	GPR142	Q7Z601	462 aa		13.87	□□□□□ -0.19
PRKCSH-206	ENST00000587509	ZNF589	Q86UQ0	364 aa	Predicted RBP	13.87	□□□□□ -0.19
PRKCSH-206	ENST00000587509	GMCL1P1	Q8NEA9	526 aa		13.87	□□□□□ -0.19
PRKCSH-206	ENST00000587509	APBA2	Q99767	749 aa		13.87	□□□□□ -0.19
PRKCSH-206	ENST00000587509	DSCC1	Q9BVC3	393 aa		13.87	□□□□□ -0.19
PRKCSH-206	ENST00000587509	TXNRD2	Q9NNW7	524 aa		13.87	□□□□□ -0.19
PRKCSH-206	ENST00000587509	SLC5A4	Q9NY91	659 aa		13.87	□□□□□ -0.19
PRKCSH-206	ENST00000587509	RBPJL	Q9UBG7	517 aa		13.87	□□□□□ -0.19
PRKCSH-206	ENST00000587509	CLIP2	Q9UDT6	1046 aa		13.87	□□□□□ -0.19
PRKCSH-206	ENST00000587509	ISY1	Q9ULR0	285 aa	Known RBP	13.87	□□□□□ -0.19
PRKCSH-206	ENST00000587509	STX8	Q9UNK0	236 aa		13.87	□□□□□ -0.19
PRKCSH-206	ENST00000587509	HTT	P42858	3142 aa		13.87	□□□□□ -0.19
PRKCSH-206	ENST00000587509	IGKV6D-41	A0A0C4DH26	115 aa		13.86	□□□□□ -0.19
PRKCSH-206	ENST00000587509	SMIM22	K7EJ46	135 aa		13.86	□□□□□ -0.19
PRKCSH-206	ENST00000587509	ZNF213	O14771	459 aa		13.86	□□□□□ -0.19
PRKCSH-206	ENST00000587509	FGA	P02671	866 aa		13.86	□□□□□ -0.19
PRKCSH-206	ENST00000587509	CENPB	P07199	599 aa	Predicted RBP	13.86	□□□□□ -0.19
PRKCSH-206	ENST00000587509	XRCC5	P13010	732 aa	Known RBP	13.86	□□□□□ -0.19
PRKCSH-206	ENST00000587509	ZKSCAN1	P17029	563 aa	Predicted RBP	13.86	□□□□□ -0.19
PRKCSH-206	ENST00000587509	PDE4A	P27815	886 aa		13.86	□□□□□ -0.19
PRKCSH-206	ENST00000587509	DSG3	P32926	999 aa		13.86	□□□□□ -0.19
PRKCSH-206	ENST00000587509	MFSD6	Q6ZSS7	791 aa		13.86	□□□□□ -0.19
PRKCSH-206	ENST00000587509	SHCBP1	Q8NEM2	672 aa		13.86	□□□□□ -0.19
PRKCSH-206	ENST00000587509	ESR2	Q92731	530 aa		13.86	□□□□□ -0.19
PRKCSH-206	ENST00000587509	SLF1	Q9BQI6	1058 aa		13.86	□□□□□ -0.19
PRKCSH-206	ENST00000587509	MROH8	Q9H579	483 aa		13.86	□□□□□ -0.19
PRKCSH-206	ENST00000587509	GABRQ	Q9UN88	632 aa		13.86	□□□□□ -0.19
PRKCSH-206	ENST00000587509	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	13.86	□□□□□ -0.19
PRKCSH-206	ENST00000587509		A0A0G2JMZ2	1700 aa		13.86	□□□□□ -0.19
PRKCSH-206	ENST00000587509	SLC15A5	A6NIM6	579 aa		13.85	□□□□□ -0.19
PRKCSH-206	ENST00000587509		F5H6K3	240 aa		13.85	□□□□□ -0.19
PRKCSH-206	ENST00000587509	FOXP2	O15409	715 aa		13.85	□□□□□ -0.19
PRKCSH-206	ENST00000587509	SLC25A27	O95847	323 aa		13.85	□□□□□ -0.19
PRKCSH-206	ENST00000587509	NDUFB10	O96000	172 aa		13.85	□□□□□ -0.19
PRKCSH-206	ENST00000587509	INHA	P05111	366 aa		13.85	□□□□□ -0.19
PRKCSH-206	ENST00000587509	CTDSPL2	Q05D32	466 aa		13.85	□□□□□ -0.19

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