RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 RASSF7Q02833 373 aa22.92■■□□□ 1.26
TRIM47-204ENST00000587339 FOXP1Q9H334 677 aaPredicted RBP22.92■■□□□ 1.26
TRIM47-204ENST00000587339 MYH6P13533 1939 aa22.92■■□□□ 1.26
TRIM47-204ENST00000587339 SCG2P13521 617 aa22.92■■□□□ 1.26
TRIM47-204ENST00000587339 SPDYE2Q495Y8 402 aa22.92■■□□□ 1.26
TRIM47-204ENST00000587339 NOSTRINQ8IVI9 506 aa22.92■■□□□ 1.26
TRIM47-204ENST00000587339 PGBD1Q96JS3 809 aa22.92■■□□□ 1.26
TRIM47-204ENST00000587339 CSRNP1Q96S65 589 aa22.92■■□□□ 1.26
TRIM47-204ENST00000587339 LZTS2Q9BRK4 669 aa22.92■■□□□ 1.26
TRIM47-204ENST00000587339 ISY1Q9ULR0 285 aaKnown RBP22.92■■□□□ 1.26
TRIM47-204ENST00000587339 FSD2A1L4K1 749 aa22.91■■□□□ 1.26
TRIM47-204ENST00000587339 MYO1BO43795 1136 aa22.91■■□□□ 1.26
TRIM47-204ENST00000587339 PARP1P09874 1014 aaKnown RBP22.91■■□□□ 1.26
TRIM47-204ENST00000587339 EIF6P56537 245 aaKnown RBP22.91■■□□□ 1.26
TRIM47-204ENST00000587339 PFKFB3Q16875 520 aaPredicted RBP22.91■■□□□ 1.26
TRIM47-204ENST00000587339 CERKLQ49MI3 558 aaPredicted RBP22.91■■□□□ 1.26
TRIM47-204ENST00000587339 CLIP2Q9UDT6 1046 aa22.91■■□□□ 1.26
TRIM47-204ENST00000587339 CLIC4Q9Y696 253 aa22.91■■□□□ 1.26
TRIM47-204ENST00000587339 SIPA1L1O43166 1804 aa22.91■■□□□ 1.26
TRIM47-204ENST00000587339 GOLGA8HP0CJ92 632 aa22.9■■□□□ 1.26
TRIM47-204ENST00000587339 PPP4R3BQ5MIZ7 849 aa22.9■■□□□ 1.26
TRIM47-204ENST00000587339 TATDN1Q6P1N9 297 aa22.9■■□□□ 1.26
TRIM47-204ENST00000587339 METTL16Q86W50 562 aaKnown RBP22.9■■□□□ 1.26
TRIM47-204ENST00000587339 PIBF1Q8WXW3 757 aa22.9■■□□□ 1.26
TRIM47-204ENST00000587339 PHF20Q9BVI0 1012 aa22.9■■□□□ 1.26
TRIM47-204ENST00000587339 KLRF2D3W0D1 207 aa22.9■■□□□ 1.26
TRIM47-204ENST00000587339 YEATS4O95619 227 aa22.9■■□□□ 1.26
TRIM47-204ENST00000587339 CLEC10AQ8IUN9 316 aa22.9■■□□□ 1.26
TRIM47-204ENST00000587339 LINC00301Q8NCQ3 95 aa22.9■■□□□ 1.26
TRIM47-204ENST00000587339 BICD2Q8TD16 824 aa22.9■■□□□ 1.26
TRIM47-204ENST00000587339 SYCE3A1L190 88 aa22.89■■□□□ 1.25
TRIM47-204ENST00000587339 RPS12P25398 132 aaKnown RBP22.89■■□□□ 1.25
TRIM47-204ENST00000587339 ME1P48163 572 aa22.89■■□□□ 1.25
TRIM47-204ENST00000587339 NASPP49321 788 aaPredicted RBP22.89■■□□□ 1.25
TRIM47-204ENST00000587339 MMP14P50281 582 aa22.89■■□□□ 1.25
TRIM47-204ENST00000587339 STK38Q15208 465 aa22.89■■□□□ 1.25
TRIM47-204ENST00000587339 CCDC183Q5T5S1 534 aa22.89■■□□□ 1.25
TRIM47-204ENST00000587339 ANO1Q5XXA6 986 aa22.89■■□□□ 1.25
TRIM47-204ENST00000587339 USP17L2Q6R6M4 530 aa22.89■■□□□ 1.25
TRIM47-204ENST00000587339 RASGRP2Q7LDG7 609 aa22.89■■□□□ 1.25
TRIM47-204ENST00000587339 LRRC47Q8N1G4 583 aaKnown RBP22.89■■□□□ 1.25
TRIM47-204ENST00000587339 FAM151AQ8WW52 585 aa22.89■■□□□ 1.25
TRIM47-204ENST00000587339 SHISA4Q96DD7 197 aa22.89■■□□□ 1.25
TRIM47-204ENST00000587339 VEZTQ9HBM0 779 aa22.89■■□□□ 1.25
TRIM47-204ENST00000587339 MYOZ2Q9NPC6 264 aa22.89■■□□□ 1.25
TRIM47-204ENST00000587339 FKBP1CQ5VVH2 108 aa22.88■■□□□ 1.25
TRIM47-204ENST00000587339 GAS2L3Q86XJ1 694 aa22.88■■□□□ 1.25
TRIM47-204ENST00000587339 KCNG4Q8TDN1 519 aa22.88■■□□□ 1.25
TRIM47-204ENST00000587339 ARFGEF1Q9Y6D6 1849 aa22.88■■□□□ 1.25
TRIM47-204ENST00000587339 WNT10BO00744 389 aa22.88■■□□□ 1.25
TRIM47-204ENST00000587339 PDHBP11177 359 aa22.88■■□□□ 1.25
TRIM47-204ENST00000587339 NR5A1Q13285 461 aa22.88■■□□□ 1.25
TRIM47-204ENST00000587339 SF3A1Q15459 793 aaKnown RBP22.88■■□□□ 1.25
TRIM47-204ENST00000587339 BRMS1Q9HCU9 246 aa22.88■■□□□ 1.25
TRIM47-204ENST00000587339 CYTH3O43739 400 aa22.87■■□□□ 1.25
TRIM47-204ENST00000587339 KRT2P35908 639 aa22.87■■□□□ 1.25
TRIM47-204ENST00000587339 PRELPP51888 382 aa22.87■■□□□ 1.25
TRIM47-204ENST00000587339 OXER1Q8TDS5 423 aa22.87■■□□□ 1.25
TRIM47-204ENST00000587339 ZBED3Q96IU2 234 aaPredicted RBP22.87■■□□□ 1.25
TRIM47-204ENST00000587339 SPZ1Q9BXG8 430 aa22.87■■□□□ 1.25
TRIM47-204ENST00000587339 HERC5Q9UII4 1024 aaKnown RBP22.87■■□□□ 1.25
TRIM47-204ENST00000587339 USP17L5A8MUK1 530 aa22.86■■□□□ 1.25
TRIM47-204ENST00000587339 FZD9O00144 591 aa22.86■■□□□ 1.25
TRIM47-204ENST00000587339 LIG1P18858 919 aa22.86■■□□□ 1.25
TRIM47-204ENST00000587339 ATP2B2Q01814 1243 aa22.86■■□□□ 1.25
TRIM47-204ENST00000587339 NBPF9Q3BBW0 867 aa22.86■■□□□ 1.25
TRIM47-204ENST00000587339 L1TD1Q5T7N2 865 aaKnown RBP22.86■■□□□ 1.25
TRIM47-204ENST00000587339 KANSL2Q9H9L4 492 aa22.86■■□□□ 1.25
TRIM47-204ENST00000587339 GREB1LQ9C091 1923 aaPredicted RBP22.86■■□□□ 1.25
TRIM47-204ENST00000587339 CNTNAP1P78357 1384 aa22.86■■□□□ 1.25
TRIM47-204ENST00000587339 SPTLC2O15270 562 aa22.86■■□□□ 1.25
TRIM47-204ENST00000587339 SLC35G1Q2M3R5 365 aa22.86■■□□□ 1.25
TRIM47-204ENST00000587339 TMEM179Q6ZVK1 233 aa22.86■■□□□ 1.25
TRIM47-204ENST00000587339 SHTN1A0MZ66 631 aa22.85■■□□□ 1.25
TRIM47-204ENST00000587339 LETM1O95202 739 aaPredicted RBP22.85■■□□□ 1.25
TRIM47-204ENST00000587339 SNHG28P0DPA3 235 aa22.85■■□□□ 1.25
TRIM47-204ENST00000587339 VEGFAP15692 232 aaPredicted RBP22.85■■□□□ 1.25
TRIM47-204ENST00000587339 SMARCA1P28370 1054 aa22.85■■□□□ 1.25
TRIM47-204ENST00000587339 ZNF280AP59817 542 aaPredicted RBP22.85■■□□□ 1.25
TRIM47-204ENST00000587339 ABCB5Q2M3G0 1257 aa22.85■■□□□ 1.25
TRIM47-204ENST00000587339 RILPL1Q5EBL4 403 aa22.85■■□□□ 1.25
TRIM47-204ENST00000587339 LRSAM1Q6UWE0 723 aa22.85■■□□□ 1.25
TRIM47-204ENST00000587339 FAM83AQ86UY5 434 aa22.85■■□□□ 1.25
TRIM47-204ENST00000587339 SH3GLB2Q9NR46 395 aa22.85■■□□□ 1.25
TRIM47-204ENST00000587339 PCDHA7Q9UN72 937 aa22.85■■□□□ 1.25
TRIM47-204ENST00000587339 GJA3Q9Y6H8 435 aa22.85■■□□□ 1.25
TRIM47-204ENST00000587339 NLRP5P59047 1200 aa22.84■■□□□ 1.25
TRIM47-204ENST00000587339 SLC39A14Q15043 492 aa22.84■■□□□ 1.25
TRIM47-204ENST00000587339 ASPRV1Q53RT3 343 aa22.84■■□□□ 1.25
TRIM47-204ENST00000587339 FHDC1Q9C0D6 1143 aaPredicted RBP22.84■■□□□ 1.25
TRIM47-204ENST00000587339 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.84■■□□□ 1.25
TRIM47-204ENST00000587339 DACT1Q9NYF0 836 aa22.84■■□□□ 1.25
TRIM47-204ENST00000587339 BAZ2BQ9UIF8 2168 aaKnown RBP22.84■■□□□ 1.25
TRIM47-204ENST00000587339 UTRNP46939 3433 aa22.84■■□□□ 1.25
TRIM47-204ENST00000587339 GDF11O95390 407 aa22.84■■□□□ 1.25
TRIM47-204ENST00000587339 SHROOM1Q2M3G4 852 aaPredicted RBP22.84■■□□□ 1.25
TRIM47-204ENST00000587339 ADALQ6DHV7 355 aa22.84■■□□□ 1.25
TRIM47-204ENST00000587339 DPF2Q92785 391 aa22.84■■□□□ 1.25
TRIM47-204ENST00000587339 CPVLQ9H3G5 476 aa22.84■■□□□ 1.25
TRIM47-204ENST00000587339 NYAP2Q9P242 653 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms