RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 C1orf53Q5VUE5 145 aa10.46□□□□□ -0.73
SDF2-204ENST00000587338 MOV10L1Q9BXT6 1211 aaKnown RBP10.46□□□□□ -0.73
SDF2-204ENST00000587338 API5Q9BZZ5 524 aaKnown RBP10.46□□□□□ -0.73
SDF2-204ENST00000587338 TACC3Q9Y6A5 838 aa10.46□□□□□ -0.73
SDF2-204ENST00000587338 FOCADQ5VW36 1801 aa10.46□□□□□ -0.74
SDF2-204ENST00000587338 ZNF236Q9UL36 1845 aa10.46□□□□□ -0.74
SDF2-204ENST00000587338 STRNO43815 780 aa10.45□□□□□ -0.74
SDF2-204ENST00000587338 COBLO75128 1261 aa10.45□□□□□ -0.74
SDF2-204ENST00000587338 GNAI3P08754 354 aa10.45□□□□□ -0.74
SDF2-204ENST00000587338 ERCC3P19447 782 aa10.45□□□□□ -0.74
SDF2-204ENST00000587338 HOXD11P31277 338 aaPredicted RBP10.45□□□□□ -0.74
SDF2-204ENST00000587338 PLA2G5P39877 138 aa10.45□□□□□ -0.74
SDF2-204ENST00000587338 USP5P45974 858 aa10.45□□□□□ -0.74
SDF2-204ENST00000587338 MTX1Q13505 466 aa10.45□□□□□ -0.74
SDF2-204ENST00000587338 PLS1Q14651 629 aa10.45□□□□□ -0.74
SDF2-204ENST00000587338 CERKLQ49MI3 558 aaPredicted RBP10.45□□□□□ -0.74
SDF2-204ENST00000587338 TATDN1Q6P1N9 297 aa10.45□□□□□ -0.74
SDF2-204ENST00000587338 ADAMTS19Q8TE59 1207 aa10.45□□□□□ -0.74
SDF2-204ENST00000587338 TIFAQ96CG3 184 aa10.45□□□□□ -0.74
SDF2-204ENST00000587338 TANGO6Q9C0B7 1094 aa10.45□□□□□ -0.74
SDF2-204ENST00000587338 ZNF576Q9H609 170 aa10.45□□□□□ -0.74
SDF2-204ENST00000587338 CABP5Q9NP86 173 aa10.45□□□□□ -0.74
SDF2-204ENST00000587338 XPNPEP3Q9NQH7 507 aa10.45□□□□□ -0.74
SDF2-204ENST00000587338 SLC5A4Q9NY91 659 aa10.45□□□□□ -0.74
SDF2-204ENST00000587338 SERPINB13Q9UIV8 391 aa10.45□□□□□ -0.74
SDF2-204ENST00000587338 PHF24Q9UPV7 400 aa10.45□□□□□ -0.74
SDF2-204ENST00000587338 MYO9BQ13459 2157 aa10.45□□□□□ -0.74
SDF2-204ENST00000587338 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.44□□□□□ -0.74
SDF2-204ENST00000587338 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.44□□□□□ -0.74
SDF2-204ENST00000587338 KIAA0355O15063 1070 aa10.44□□□□□ -0.74
SDF2-204ENST00000587338 PGK1P00558 417 aa10.44□□□□□ -0.74
SDF2-204ENST00000587338 CYP2E1P05181 493 aaPredicted RBP10.44□□□□□ -0.74
SDF2-204ENST00000587338 RARBP10826 455 aa10.44□□□□□ -0.74
SDF2-204ENST00000587338 CYP7A1P22680 504 aa10.44□□□□□ -0.74
SDF2-204ENST00000587338 G3BP1Q13283 466 aaKnown RBP eCLIP10.44□□□□□ -0.74
SDF2-204ENST00000587338 CCDC158Q5M9N0 1113 aa10.44□□□□□ -0.74
SDF2-204ENST00000587338 NCAPG2Q86XI2 1143 aa10.44□□□□□ -0.74
SDF2-204ENST00000587338 MIGA1Q8NAN2 632 aa10.44□□□□□ -0.74
SDF2-204ENST00000587338 ATXN2LQ8WWM7 1075 aaKnown RBP10.44□□□□□ -0.74
SDF2-204ENST00000587338 FAM122AQ96E09 287 aa10.44□□□□□ -0.74
SDF2-204ENST00000587338 GAS2L1Q99501 681 aaPredicted RBP10.44□□□□□ -0.74
SDF2-204ENST00000587338 SPATC1LQ9H0A9 340 aa10.44□□□□□ -0.74
SDF2-204ENST00000587338 EHD4Q9H223 541 aa10.44□□□□□ -0.74
SDF2-204ENST00000587338 PIH1D3Q9NQM4 214 aaKnown RBP10.44□□□□□ -0.74
SDF2-204ENST00000587338 TMEM39AQ9NV64 488 aa10.44□□□□□ -0.74
SDF2-204ENST00000587338 THEGQ9P2T0 379 aa10.44□□□□□ -0.74
SDF2-204ENST00000587338 REV3LO60673 3130 aa10.44□□□□□ -0.74
SDF2-204ENST00000587338 XIRP2A4UGR9 3374 aa10.43□□□□□ -0.74
SDF2-204ENST00000587338 A0A1W2PQ45 241 aaPredicted RBP10.43□□□□□ -0.74
SDF2-204ENST00000587338 A0A1W2PQY0 241 aa10.43□□□□□ -0.74
SDF2-204ENST00000587338 ZAP70P43403 619 aa10.43□□□□□ -0.74
SDF2-204ENST00000587338 SLFN5Q08AF3 891 aa10.43□□□□□ -0.74
SDF2-204ENST00000587338 COG2Q14746 738 aa10.43□□□□□ -0.74
SDF2-204ENST00000587338 SEPT2Q15019 361 aa10.43□□□□□ -0.74
SDF2-204ENST00000587338 SAMD1Q6SPF0 538 aaPredicted RBP10.43□□□□□ -0.74
SDF2-204ENST00000587338 CCDC129Q6ZRS4 1044 aa10.43□□□□□ -0.74
SDF2-204ENST00000587338 RNF180Q86T96 592 aa10.43□□□□□ -0.74
SDF2-204ENST00000587338 TTC6Q86TZ1 520 aa10.43□□□□□ -0.74
SDF2-204ENST00000587338 SHCBP1Q8NEM2 672 aa10.43□□□□□ -0.74
SDF2-204ENST00000587338 IL27Q8NEV9 243 aa10.43□□□□□ -0.74
SDF2-204ENST00000587338 MAML3Q96JK9 1138 aa10.43□□□□□ -0.74
SDF2-204ENST00000587338 ASB2Q96Q27 587 aa10.43□□□□□ -0.74
SDF2-204ENST00000587338 DBNDD2Q9BQY9 259 aa10.43□□□□□ -0.74
SDF2-204ENST00000587338 PRDM12Q9H4Q4 367 aa10.43□□□□□ -0.74
SDF2-204ENST00000587338 HOXC10Q9NYD6 342 aa10.43□□□□□ -0.74
SDF2-204ENST00000587338 MYH1P12882 1939 aa10.43□□□□□ -0.74
SDF2-204ENST00000587338 PNMA6EA0A0J9YXQ4 647 aa10.42□□□□□ -0.74
SDF2-204ENST00000587338 MPHOSPH10O00566 681 aaKnown RBP10.42□□□□□ -0.74
SDF2-204ENST00000587338 IDH1O75874 414 aaKnown RBP10.42□□□□□ -0.74
SDF2-204ENST00000587338 GUCY1A2P33402 732 aa10.42□□□□□ -0.74
SDF2-204ENST00000587338 SHMT1P34896 483 aa10.42□□□□□ -0.74
SDF2-204ENST00000587338 CCDC85BQ15834 202 aaPredicted RBP10.42□□□□□ -0.74
SDF2-204ENST00000587338 TNNI3KQ59H18 835 aa10.42□□□□□ -0.74
SDF2-204ENST00000587338 LENG1Q96BZ8 264 aaPredicted RBP10.42□□□□□ -0.74
SDF2-204ENST00000587338 UHRF1Q96T88 793 aaPredicted RBP10.42□□□□□ -0.74
SDF2-204ENST00000587338 MROH8Q9H579 483 aa10.42□□□□□ -0.74
SDF2-204ENST00000587338 FPGT-TNNI3KV9GXZ4 949 aa10.42□□□□□ -0.74
SDF2-204ENST00000587338 A0A1W2PRG0 241 aa10.41□□□□□ -0.74
SDF2-204ENST00000587338 DCDC2CA8MYV0 355 aa10.41□□□□□ -0.74
SDF2-204ENST00000587338 FCER1AP12319 257 aa10.41□□□□□ -0.74
SDF2-204ENST00000587338 PBX2P40425 430 aa10.41□□□□□ -0.74
SDF2-204ENST00000587338 MRPS5P82675 430 aaKnown RBP10.41□□□□□ -0.74
SDF2-204ENST00000587338 FAAP100Q0VG06 881 aa10.41□□□□□ -0.74
SDF2-204ENST00000587338 MAP3K12Q12852 859 aa10.41□□□□□ -0.74
SDF2-204ENST00000587338 OS9Q13438 667 aaPredicted RBP10.41□□□□□ -0.74
SDF2-204ENST00000587338 AKNAD1Q5T1N1 836 aa10.41□□□□□ -0.74
SDF2-204ENST00000587338 CERS3Q8IU89 383 aa10.41□□□□□ -0.74
SDF2-204ENST00000587338 ABRAQ8N0Z2 381 aa10.41□□□□□ -0.74
SDF2-204ENST00000587338 MB21D1Q8N884 522 aa10.41□□□□□ -0.74
SDF2-204ENST00000587338 SLC44A5Q8NCS7 719 aa10.41□□□□□ -0.74
SDF2-204ENST00000587338 ATG4CQ96DT6 458 aa10.41□□□□□ -0.74
SDF2-204ENST00000587338 CDCA7LQ96GN5 454 aa10.41□□□□□ -0.74
SDF2-204ENST00000587338 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.41□□□□□ -0.74
SDF2-204ENST00000587338 PBX4Q9BYU1 374 aa10.41□□□□□ -0.74
SDF2-204ENST00000587338 A0A0G2JMZ2 1700 aa10.41□□□□□ -0.74
SDF2-204ENST00000587338 TRANK1O15050 2925 aa10.4□□□□□ -0.74
SDF2-204ENST00000587338 MYO5AQ9Y4I1 1855 aaKnown RBP10.4□□□□□ -0.74
SDF2-204ENST00000587338 PIEZO1Q92508 2521 aa10.4□□□□□ -0.74
SDF2-204ENST00000587338 GRXCR1A8MXD5 290 aa10.4□□□□□ -0.74
SDF2-204ENST00000587338 FLOT1O75955 427 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms