RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 AS3MTQ9HBK9 375 aa9.42□□□□□ -0.9
VMP1-204ENST00000587259 MTMR10Q9NXD2 777 aa9.42□□□□□ -0.9
VMP1-204ENST00000587259 HERC5Q9UII4 1024 aaKnown RBP9.42□□□□□ -0.9
VMP1-204ENST00000587259 COL2A1P02458 1487 aaPredicted RBP9.41□□□□□ -0.9
VMP1-204ENST00000587259 USP17L10C9JJH3 530 aa9.41□□□□□ -0.9
VMP1-204ENST00000587259 COL6A1P12109 1028 aa9.41□□□□□ -0.9
VMP1-204ENST00000587259 HOXA7P31268 230 aaPredicted RBP9.41□□□□□ -0.9
VMP1-204ENST00000587259 TNNI3KQ59H18 835 aa9.41□□□□□ -0.9
VMP1-204ENST00000587259 MORN1Q5T089 497 aa9.41□□□□□ -0.9
VMP1-204ENST00000587259 TTC22Q5TAA0 569 aa9.41□□□□□ -0.9
VMP1-204ENST00000587259 ANO1Q5XXA6 986 aa9.41□□□□□ -0.9
VMP1-204ENST00000587259 SKAP1Q86WV1 359 aa9.41□□□□□ -0.9
VMP1-204ENST00000587259 EFCAB3Q8N7B9 438 aa9.41□□□□□ -0.9
VMP1-204ENST00000587259 ACER1Q8TDN7 264 aa9.41□□□□□ -0.9
VMP1-204ENST00000587259 RNF25Q96BH1 459 aaPredicted RBP9.41□□□□□ -0.9
VMP1-204ENST00000587259 GPATCH3Q96I76 525 aa9.41□□□□□ -0.9
VMP1-204ENST00000587259 NOL10Q9BSC4 688 aaKnown RBP9.41□□□□□ -0.9
VMP1-204ENST00000587259 TRIM34Q9BYJ4 488 aa9.41□□□□□ -0.9
VMP1-204ENST00000587259 NOP58Q9Y2X3 529 aaKnown RBP9.41□□□□□ -0.9
VMP1-204ENST00000587259 FPGT-TNNI3KV9GXZ4 949 aa9.41□□□□□ -0.9
VMP1-204ENST00000587259 UNC80Q8N2C7 3258 aa9.41□□□□□ -0.9
VMP1-204ENST00000587259 LAMA2P24043 3122 aaKnown RBP9.4□□□□□ -0.9
VMP1-204ENST00000587259 CDK5RAP2Q96SN8 1893 aa9.4□□□□□ -0.9
VMP1-204ENST00000587259 DNAH12Q6ZR08 3092 aa9.4□□□□□ -0.9
VMP1-204ENST00000587259 RIOK3O14730 519 aaKnown RBP9.4□□□□□ -0.9
VMP1-204ENST00000587259 ST18O60284 1047 aa9.4□□□□□ -0.9
VMP1-204ENST00000587259 CDC45O75419 566 aa9.4□□□□□ -0.9
VMP1-204ENST00000587259 ASNSP08243 561 aa9.4□□□□□ -0.9
VMP1-204ENST00000587259 UQCRFS1P1P0C7P4 283 aa9.4□□□□□ -0.9
VMP1-204ENST00000587259 CYP7A1P22680 504 aa9.4□□□□□ -0.9
VMP1-204ENST00000587259 CNGA1P29973 690 aa9.4□□□□□ -0.9
VMP1-204ENST00000587259 CYP2C19P33261 490 aa9.4□□□□□ -0.9
VMP1-204ENST00000587259 RAB3GAP1Q15042 981 aa9.4□□□□□ -0.9
VMP1-204ENST00000587259 LRIT3Q3SXY7 679 aa9.4□□□□□ -0.9
VMP1-204ENST00000587259 PLEKHH3Q7Z736 793 aa9.4□□□□□ -0.9
VMP1-204ENST00000587259 PLEKHM2Q8IWE5 1019 aa9.4□□□□□ -0.9
VMP1-204ENST00000587259 CCAR1Q8IX12 1150 aaKnown RBP9.4□□□□□ -0.9
VMP1-204ENST00000587259 TRPV1Q8NER1 839 aa9.4□□□□□ -0.9
VMP1-204ENST00000587259 NPLOC4Q8TAT6 608 aa9.4□□□□□ -0.9
VMP1-204ENST00000587259 SOCS4Q8WXH5 440 aa9.4□□□□□ -0.9
VMP1-204ENST00000587259 SENP6Q9GZR1 1112 aaPredicted RBP9.4□□□□□ -0.9
VMP1-204ENST00000587259 CCDC8Q9H0W5 538 aaPredicted RBP9.4□□□□□ -0.9
VMP1-204ENST00000587259 ANTXR1Q9H6X2 564 aa9.4□□□□□ -0.9
VMP1-204ENST00000587259 BTBD7Q9P203 1132 aa9.4□□□□□ -0.9
VMP1-204ENST00000587259 DAXXQ9UER7 740 aaPredicted RBP9.4□□□□□ -0.9
VMP1-204ENST00000587259 MYH7P12883 1935 aa9.39□□□□□ -0.91
VMP1-204ENST00000587259 SURF6O75683 361 aaKnown RBP9.39□□□□□ -0.91
VMP1-204ENST00000587259 IDH1O75874 414 aaKnown RBP9.39□□□□□ -0.91
VMP1-204ENST00000587259 BAG3O95817 575 aa9.39□□□□□ -0.91
VMP1-204ENST00000587259 XRCC5P13010 732 aaKnown RBP9.39□□□□□ -0.91
VMP1-204ENST00000587259 MX1P20591 662 aa9.39□□□□□ -0.91
VMP1-204ENST00000587259 MAPK4P31152 587 aa9.39□□□□□ -0.91
VMP1-204ENST00000587259 RGS2P41220 211 aa9.39□□□□□ -0.91
VMP1-204ENST00000587259 PPP4CP60510 307 aa9.39□□□□□ -0.91
VMP1-204ENST00000587259 OS9Q13438 667 aaPredicted RBP9.39□□□□□ -0.91
VMP1-204ENST00000587259 METTL16Q86W50 562 aaKnown RBP9.39□□□□□ -0.91
VMP1-204ENST00000587259 CLASRPQ8N2M8 674 aaKnown RBP9.39□□□□□ -0.91
VMP1-204ENST00000587259 GUCD1Q96NT3 240 aa9.39□□□□□ -0.91
VMP1-204ENST00000587259 FEZ1Q99689 392 aa9.39□□□□□ -0.91
VMP1-204ENST00000587259 APBA2Q99767 749 aa9.39□□□□□ -0.91
VMP1-204ENST00000587259 TBC1D2Q9BYX2 928 aa9.39□□□□□ -0.91
VMP1-204ENST00000587259 BCL11AQ9H165 835 aa9.39□□□□□ -0.91
VMP1-204ENST00000587259 DHX36Q9H2U1 1008 aaKnown RBP9.39□□□□□ -0.91
VMP1-204ENST00000587259 CWC22Q9HCG8 908 aaKnown RBP9.39□□□□□ -0.91
VMP1-204ENST00000587259 DBNLQ9UJU6 430 aaKnown RBP9.39□□□□□ -0.91
VMP1-204ENST00000587259 EXOC6BQ9Y2D4 811 aa9.39□□□□□ -0.91
VMP1-204ENST00000587259 STXBP5LQ9Y2K9 1186 aa9.39□□□□□ -0.91
VMP1-204ENST00000587259 TTC41PQ6P2S7 1318 aa9.38□□□□□ -0.91
VMP1-204ENST00000587259 MAST2Q6P0Q8 1798 aa9.38□□□□□ -0.91
VMP1-204ENST00000587259 C19orf81C9J6K1 198 aa9.38□□□□□ -0.91
VMP1-204ENST00000587259 ERC2O15083 957 aa9.38□□□□□ -0.91
VMP1-204ENST00000587259 VCAM1P19320 739 aa9.38□□□□□ -0.91
VMP1-204ENST00000587259 GUCY1A2P33402 732 aa9.38□□□□□ -0.91
VMP1-204ENST00000587259 USP5P45974 858 aa9.38□□□□□ -0.91
VMP1-204ENST00000587259 PLCD1P51178 756 aa9.38□□□□□ -0.91
VMP1-204ENST00000587259 MAP2K5Q13163 448 aa9.38□□□□□ -0.91
VMP1-204ENST00000587259 BECN1Q14457 450 aa9.38□□□□□ -0.91
VMP1-204ENST00000587259 KIAA1755Q5JYT7 1200 aa9.38□□□□□ -0.91
VMP1-204ENST00000587259 CCDC158Q5M9N0 1113 aa9.38□□□□□ -0.91
VMP1-204ENST00000587259 GJC2Q5T442 439 aaPredicted RBP9.38□□□□□ -0.91
VMP1-204ENST00000587259 USP17L2Q6R6M4 530 aa9.38□□□□□ -0.91
VMP1-204ENST00000587259 CLEC10AQ8IUN9 316 aa9.38□□□□□ -0.91
VMP1-204ENST00000587259 FOXP4Q8IVH2 680 aaPredicted RBP9.38□□□□□ -0.91
VMP1-204ENST00000587259 MAGEB6Q8N7X4 407 aa9.38□□□□□ -0.91
VMP1-204ENST00000587259 EDC3Q96F86 508 aaKnown RBP9.38□□□□□ -0.91
VMP1-204ENST00000587259 COL25A1Q9BXS0 654 aaPredicted RBP9.38□□□□□ -0.91
VMP1-204ENST00000587259 EYSQ5T1H1 3165 aa9.38□□□□□ -0.91
VMP1-204ENST00000587259 FOCADQ5VW36 1801 aa9.38□□□□□ -0.91
VMP1-204ENST00000587259 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.37□□□□□ -0.91
VMP1-204ENST00000587259 SMIM22K7EJ46 135 aa9.37□□□□□ -0.91
VMP1-204ENST00000587259 MAP4K4O95819 1239 aaPredicted RBP9.37□□□□□ -0.91
VMP1-204ENST00000587259 HLA-DOAP06340 250 aa9.37□□□□□ -0.91
VMP1-204ENST00000587259 PDE1AP54750 535 aa9.37□□□□□ -0.91
VMP1-204ENST00000587259 SLFNL1Q499Z3 407 aa9.37□□□□□ -0.91
VMP1-204ENST00000587259 PRAMEF19Q5SWL8 479 aa9.37□□□□□ -0.91
VMP1-204ENST00000587259 C9orf50Q5SZB4 431 aa9.37□□□□□ -0.91
VMP1-204ENST00000587259 CATSPERGQ6ZRH7 1159 aa9.37□□□□□ -0.91
VMP1-204ENST00000587259 IL27Q8NEV9 243 aa9.37□□□□□ -0.91
VMP1-204ENST00000587259 RHPN1Q8TCX5 695 aa9.37□□□□□ -0.91
VMP1-204ENST00000587259 EAF2Q96CJ1 260 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms