RNA–Protein interactions for RNA: ENST00000587135.1

HDAC5-205, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-205ENST00000587135 HIP1O00291 1037 aa23.19■■□□□ 1.3
HDAC5-205ENST00000587135 CNMDO75829 334 aa23.19■■□□□ 1.3
HDAC5-205ENST00000587135 SLC3A2P08195 630 aaKnown RBP23.19■■□□□ 1.3
HDAC5-205ENST00000587135 FGRP09769 529 aa23.19■■□□□ 1.3
HDAC5-205ENST00000587135 INCENPQ9NQS7 918 aa23.19■■□□□ 1.3
HDAC5-205ENST00000587135 NYAP2Q9P242 653 aa23.19■■□□□ 1.3
HDAC5-205ENST00000587135 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.19■■□□□ 1.3
HDAC5-205ENST00000587135 RABGAP1Q9Y3P9 1069 aa23.19■■□□□ 1.3
HDAC5-205ENST00000587135 TNPO2O14787 897 aaKnown RBP23.18■■□□□ 1.3
HDAC5-205ENST00000587135 COG2Q14746 738 aa23.18■■□□□ 1.3
HDAC5-205ENST00000587135 CWC27Q6UX04 472 aaKnown RBP23.18■■□□□ 1.3
HDAC5-205ENST00000587135 NEDD1Q8NHV4 660 aa23.18■■□□□ 1.3
HDAC5-205ENST00000587135 MKL1Q969V6 931 aa23.18■■□□□ 1.3
HDAC5-205ENST00000587135 ZNF333Q96JL9 665 aa23.18■■□□□ 1.3
HDAC5-205ENST00000587135 HOXC10Q9NYD6 342 aa23.18■■□□□ 1.3
HDAC5-205ENST00000587135 GJD2Q9UKL4 321 aa23.18■■□□□ 1.3
HDAC5-205ENST00000587135 ZMYM6O95789 1325 aa23.17■■□□□ 1.3
HDAC5-205ENST00000587135 FLT3LGP49771 235 aa23.17■■□□□ 1.3
HDAC5-205ENST00000587135 ERVK-9P63128 1117 aa23.17■■□□□ 1.3
HDAC5-205ENST00000587135 ERVK-24P63145 666 aa23.17■■□□□ 1.3
HDAC5-205ENST00000587135 CTDSPL2Q05D32 466 aa23.17■■□□□ 1.3
HDAC5-205ENST00000587135 SLC9C1Q4G0N8 1177 aa23.17■■□□□ 1.3
HDAC5-205ENST00000587135 NBPF11Q86T75 865 aa23.17■■□□□ 1.3
HDAC5-205ENST00000587135 MTMR4Q9NYA4 1195 aa23.17■■□□□ 1.3
HDAC5-205ENST00000587135 SPDYE16A6NNV3 312 aaPredicted RBP23.16■■□□□ 1.3
HDAC5-205ENST00000587135 MFAP1P55081 439 aaKnown RBP23.16■■□□□ 1.3
HDAC5-205ENST00000587135 SOX10P56693 466 aa23.16■■□□□ 1.3
HDAC5-205ENST00000587135 TFAP4Q01664 338 aa23.16■■□□□ 1.3
HDAC5-205ENST00000587135 ATP2B2Q01814 1243 aa23.16■■□□□ 1.3
HDAC5-205ENST00000587135 IRF5Q13568 498 aa23.16■■□□□ 1.3
HDAC5-205ENST00000587135 SPICE1Q8N0Z3 855 aa23.16■■□□□ 1.3
HDAC5-205ENST00000587135 RAET1EQ8TD07 263 aa23.16■■□□□ 1.3
HDAC5-205ENST00000587135 SH3TC2Q8TF17 1288 aa23.16■■□□□ 1.3
HDAC5-205ENST00000587135 COA7Q96BR5 231 aa23.16■■□□□ 1.3
HDAC5-205ENST00000587135 CEP95Q96GE4 821 aa23.16■■□□□ 1.3
HDAC5-205ENST00000587135 DIAPH3Q9NSV4 1193 aa23.16■■□□□ 1.3
HDAC5-205ENST00000587135 MYH8P13535 1937 aa23.16■■□□□ 1.3
HDAC5-205ENST00000587135 GREB1LQ9C091 1923 aaPredicted RBP23.16■■□□□ 1.3
HDAC5-205ENST00000587135 WDR46O15213 610 aaKnown RBP23.15■■□□□ 1.3
HDAC5-205ENST00000587135 FAM47AQ5JRC9 791 aa23.15■■□□□ 1.3
HDAC5-205ENST00000587135 BTBD7Q9P203 1132 aa23.15■■□□□ 1.3
HDAC5-205ENST00000587135 CLIP2Q9UDT6 1046 aa23.15■■□□□ 1.3
HDAC5-205ENST00000587135 PLIN4Q96Q06 1357 aa23.14■■□□□ 1.3
HDAC5-205ENST00000587135 BRCA2P51587 3418 aa23.14■■□□□ 1.3
HDAC5-205ENST00000587135 ORC4O43929 436 aa23.14■■□□□ 1.29
HDAC5-205ENST00000587135 GRK4P32298 578 aa23.14■■□□□ 1.29
HDAC5-205ENST00000587135 PAGR1Q9BTK6 254 aa23.14■■□□□ 1.29
HDAC5-205ENST00000587135 PORCNQ9H237 461 aa23.14■■□□□ 1.29
HDAC5-205ENST00000587135 GOPCQ9HD26 462 aa23.14■■□□□ 1.29
HDAC5-205ENST00000587135 F5H6K3 240 aa23.13■■□□□ 1.29
HDAC5-205ENST00000587135 TSPY3P0CV98 308 aa23.13■■□□□ 1.29
HDAC5-205ENST00000587135 TSPY8P0CW00 308 aa23.13■■□□□ 1.29
HDAC5-205ENST00000587135 DSG3P32926 999 aa23.13■■□□□ 1.29
HDAC5-205ENST00000587135 KLRC3Q07444 240 aa23.13■■□□□ 1.29
HDAC5-205ENST00000587135 CENPQQ7L2Z9 268 aaPredicted RBP23.13■■□□□ 1.29
HDAC5-205ENST00000587135 TANGO6Q9C0B7 1094 aa23.13■■□□□ 1.29
HDAC5-205ENST00000587135 IL25Q9H293 177 aa23.13■■□□□ 1.29
HDAC5-205ENST00000587135 SYNPO2Q9UMS6 1093 aa23.13■■□□□ 1.29
HDAC5-205ENST00000587135 ADAMTS5Q9UNA0 930 aa23.13■■□□□ 1.29
HDAC5-205ENST00000587135 MGAMO43451 1857 aa23.13■■□□□ 1.29
HDAC5-205ENST00000587135 TTLL1O95922 423 aa23.12■■□□□ 1.29
HDAC5-205ENST00000587135 MAPK4P31152 587 aa23.12■■□□□ 1.29
HDAC5-205ENST00000587135 NOVP48745 357 aa23.12■■□□□ 1.29
HDAC5-205ENST00000587135 PXYLP1Q8TE99 480 aa23.12■■□□□ 1.29
HDAC5-205ENST00000587135 NBPF3Q9H094 633 aa23.12■■□□□ 1.29
HDAC5-205ENST00000587135 IL17RBQ9NRM6 502 aa23.12■■□□□ 1.29
HDAC5-205ENST00000587135 ADCY3O60266 1144 aa23.11■■□□□ 1.29
HDAC5-205ENST00000587135 SLAIN1Q8ND83 568 aa23.11■■□□□ 1.29
HDAC5-205ENST00000587135 DSCC1Q9BVC3 393 aa23.11■■□□□ 1.29
HDAC5-205ENST00000587135 POTEFA5A3E0 1075 aa23.1■■□□□ 1.29
HDAC5-205ENST00000587135 FLOT1O75955 427 aa23.1■■□□□ 1.29
HDAC5-205ENST00000587135 NDUFB10O96000 172 aa23.1■■□□□ 1.29
HDAC5-205ENST00000587135 CHMLP26374 656 aa23.1■■□□□ 1.29
HDAC5-205ENST00000587135 USP6NLQ92738 828 aa23.1■■□□□ 1.29
HDAC5-205ENST00000587135 TSPY2A6NKD2 308 aa23.09■■□□□ 1.29
HDAC5-205ENST00000587135 HAND2P61296 217 aa23.09■■□□□ 1.29
HDAC5-205ENST00000587135 CCNA1P78396 465 aa23.09■■□□□ 1.29
HDAC5-205ENST00000587135 FAM83BQ5T0W9 1011 aa23.09■■□□□ 1.29
HDAC5-205ENST00000587135 GPR142Q7Z601 462 aa23.09■■□□□ 1.29
HDAC5-205ENST00000587135 PLEKHH3Q7Z736 793 aa23.09■■□□□ 1.29
HDAC5-205ENST00000587135 MB21D1Q8N884 522 aa23.09■■□□□ 1.29
HDAC5-205ENST00000587135 GMCL1P1Q8NEA9 526 aa23.09■■□□□ 1.29
HDAC5-205ENST00000587135 FBXO28Q9NVF7 368 aa23.09■■□□□ 1.29
HDAC5-205ENST00000587135 RLFQ13129 1914 aa23.09■■□□□ 1.29
HDAC5-205ENST00000587135 DOCK3Q8IZD9 2030 aa23.08■■□□□ 1.29
HDAC5-205ENST00000587135 RANBP6O60518 1105 aaKnown RBP23.08■■□□□ 1.29
HDAC5-205ENST00000587135 PCP11498 1178 aaKnown RBP23.08■■□□□ 1.29
HDAC5-205ENST00000587135 ELNP15502 786 aa23.08■■□□□ 1.29
HDAC5-205ENST00000587135 MTFR1Q15390 333 aa23.08■■□□□ 1.29
HDAC5-205ENST00000587135 MORN1Q5T089 497 aa23.08■■□□□ 1.29
HDAC5-205ENST00000587135 AKNAD1Q5T1N1 836 aa23.08■■□□□ 1.29
HDAC5-205ENST00000587135 STAG1Q8WVM7 1258 aa23.08■■□□□ 1.29
HDAC5-205ENST00000587135 ATG4CQ96DT6 458 aa23.08■■□□□ 1.29
HDAC5-205ENST00000587135 NUP88Q99567 741 aaPredicted RBP23.08■■□□□ 1.29
HDAC5-205ENST00000587135 TCP11L1Q9NUJ3 509 aa23.08■■□□□ 1.29
HDAC5-205ENST00000587135 ZNF213O14771 459 aa23.07■■□□□ 1.28
HDAC5-205ENST00000587135 NMT2O60551 498 aa23.07■■□□□ 1.28
HDAC5-205ENST00000587135 XRCC5P13010 732 aaKnown RBP23.07■■□□□ 1.28
HDAC5-205ENST00000587135 PPP4R3BQ5MIZ7 849 aa23.07■■□□□ 1.28
HDAC5-205ENST00000587135 TBC1D10CQ8IV04 446 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms