RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 PPP1R9BQ96SB3 815 aa25.65■■□□□ 1.7
CIRBP-208ENST00000586548 DHX36Q9H2U1 1008 aaKnown RBP25.65■■□□□ 1.7
CIRBP-208ENST00000586548 CMA1P23946 247 aa25.64■■□□□ 1.7
CIRBP-208ENST00000586548 TOB1P50616 345 aaPredicted RBP25.64■■□□□ 1.7
CIRBP-208ENST00000586548 TGFB2P61812 414 aa25.64■■□□□ 1.7
CIRBP-208ENST00000586548 FMR1NBQ8N0W7 255 aaPredicted RBP25.64■■□□□ 1.7
CIRBP-208ENST00000586548 GREB1LQ9C091 1923 aaPredicted RBP25.64■■□□□ 1.69
CIRBP-208ENST00000586548 IGKV6D-41A0A0C4DH26 115 aa25.63■■□□□ 1.69
CIRBP-208ENST00000586548 SIPA1L1O43166 1804 aa25.63■■□□□ 1.69
CIRBP-208ENST00000586548 SHMT1P34896 483 aa25.63■■□□□ 1.69
CIRBP-208ENST00000586548 CKAP2LQ8IYA6 745 aa25.63■■□□□ 1.69
CIRBP-208ENST00000586548 SH3GLB2Q9NR46 395 aa25.63■■□□□ 1.69
CIRBP-208ENST00000586548 PCDHAC2Q9Y5I4 1007 aa25.63■■□□□ 1.69
CIRBP-208ENST00000586548 AKR1B1P15121 316 aa25.63■■□□□ 1.69
CIRBP-208ENST00000586548 MARCKSP29966 332 aaPredicted RBP25.63■■□□□ 1.69
CIRBP-208ENST00000586548 TYRO3Q06418 890 aa25.63■■□□□ 1.69
CIRBP-208ENST00000586548 MTMR4Q9NYA4 1195 aa25.63■■□□□ 1.69
CIRBP-208ENST00000586548 BAZ2BQ9UIF8 2168 aaKnown RBP25.62■■□□□ 1.69
CIRBP-208ENST00000586548 A0A1B0GVL5 298 aa25.62■■□□□ 1.69
CIRBP-208ENST00000586548 NPY5RQ15761 445 aa25.62■■□□□ 1.69
CIRBP-208ENST00000586548 LARGE2Q8N3Y3 721 aa25.62■■□□□ 1.69
CIRBP-208ENST00000586548 SPZ1Q9BXG8 430 aa25.62■■□□□ 1.69
CIRBP-208ENST00000586548 FAM198AQ9UFP1 575 aa25.62■■□□□ 1.69
CIRBP-208ENST00000586548 CUTAO60888 179 aa25.61■■□□□ 1.69
CIRBP-208ENST00000586548 ZBTB7AO95365 584 aa25.61■■□□□ 1.69
CIRBP-208ENST00000586548 PARP1P09874 1014 aaKnown RBP25.61■■□□□ 1.69
CIRBP-208ENST00000586548 POLD1P28340 1107 aa25.61■■□□□ 1.69
CIRBP-208ENST00000586548 NDUFA8P51970 172 aa25.61■■□□□ 1.69
CIRBP-208ENST00000586548 RSBN1LQ6PCB5 846 aaPredicted RBP25.61■■□□□ 1.69
CIRBP-208ENST00000586548 TNFRSF25Q93038 417 aa25.61■■□□□ 1.69
CIRBP-208ENST00000586548 MTFR1LQ9H019 292 aa25.61■■□□□ 1.69
CIRBP-208ENST00000586548 CABP5Q9NP86 173 aa25.61■■□□□ 1.69
CIRBP-208ENST00000586548 PIM2Q9P1W9 311 aa25.61■■□□□ 1.69
CIRBP-208ENST00000586548 CEP131Q9UPN4 1083 aa25.61■■□□□ 1.69
CIRBP-208ENST00000586548 MORC2Q9Y6X9 1032 aaPredicted RBP25.61■■□□□ 1.69
CIRBP-208ENST00000586548 SMARCA1P28370 1054 aa25.6■■□□□ 1.69
CIRBP-208ENST00000586548 CFAP100Q494V2 611 aa25.6■■□□□ 1.69
CIRBP-208ENST00000586548 ZFPM1Q8IX07 1006 aa25.6■■□□□ 1.69
CIRBP-208ENST00000586548 FAM177A1Q8N128 213 aaPredicted RBP25.6■■□□□ 1.69
CIRBP-208ENST00000586548 CCDC17Q96LX7 622 aa25.6■■□□□ 1.69
CIRBP-208ENST00000586548 ZNF277Q9NRM2 450 aaPredicted RBP25.6■■□□□ 1.69
CIRBP-208ENST00000586548 KLRF2D3W0D1 207 aa25.6■■□□□ 1.69
CIRBP-208ENST00000586548 CALML3P27482 149 aa25.6■■□□□ 1.69
CIRBP-208ENST00000586548 CACNB3P54284 484 aa25.6■■□□□ 1.69
CIRBP-208ENST00000586548 NLRP5P59047 1200 aa25.6■■□□□ 1.69
CIRBP-208ENST00000586548 SLC35G1Q2M3R5 365 aa25.6■■□□□ 1.69
CIRBP-208ENST00000586548 SASS6Q6UVJ0 657 aa25.6■■□□□ 1.69
CIRBP-208ENST00000586548 MRVI1Q9Y6F6 885 aa25.6■■□□□ 1.69
CIRBP-208ENST00000586548 COL2A1P02458 1487 aaPredicted RBP25.59■■□□□ 1.69
CIRBP-208ENST00000586548 COL4A5P29400 1685 aa25.59■■□□□ 1.69
CIRBP-208ENST00000586548 FAM237AA0A1B0GTK4 181 aa25.59■■□□□ 1.69
CIRBP-208ENST00000586548 VIL1P09327 827 aaKnown RBP25.59■■□□□ 1.69
CIRBP-208ENST00000586548 PPP4R3BQ5MIZ7 849 aa25.59■■□□□ 1.69
CIRBP-208ENST00000586548 KRI1Q8N9T8 703 aaKnown RBP25.59■■□□□ 1.69
CIRBP-208ENST00000586548 PI4KBQ9UBF8 816 aa25.59■■□□□ 1.69
CIRBP-208ENST00000586548 NOL7Q9UMY1 257 aaKnown RBP25.59■■□□□ 1.69
CIRBP-208ENST00000586548 MTMR7Q9Y216 660 aa25.59■■□□□ 1.69
CIRBP-208ENST00000586548 BRCA1P38398 1863 aaKnown RBP25.58■■□□□ 1.69
CIRBP-208ENST00000586548 CYTH3O43739 400 aa25.58■■□□□ 1.69
CIRBP-208ENST00000586548 PFKFB1P16118 471 aa25.58■■□□□ 1.69
CIRBP-208ENST00000586548 PIBF1Q8WXW3 757 aa25.58■■□□□ 1.69
CIRBP-208ENST00000586548 PDLIM2Q96JY6 352 aa25.58■■□□□ 1.69
CIRBP-208ENST00000586548 ENTPD3O75355 529 aa25.57■■□□□ 1.68
CIRBP-208ENST00000586548 TTLL1O95922 423 aa25.57■■□□□ 1.68
CIRBP-208ENST00000586548 TCP10Q12799 353 aa25.57■■□□□ 1.68
CIRBP-208ENST00000586548 RESP18Q5W5W9 173 aa25.57■■□□□ 1.68
CIRBP-208ENST00000586548 PCDHB6Q9Y5E3 794 aa25.57■■□□□ 1.68
CIRBP-208ENST00000586548 DDTLA6NHG4 134 aaPredicted RBP25.57■■□□□ 1.68
CIRBP-208ENST00000586548 TRIM75PA6NK02 468 aa25.57■■□□□ 1.68
CIRBP-208ENST00000586548 PSMD14O00487 310 aa25.57■■□□□ 1.68
CIRBP-208ENST00000586548 GOLGA8HP0CJ92 632 aa25.57■■□□□ 1.68
CIRBP-208ENST00000586548 VEGFAP15692 232 aaPredicted RBP25.57■■□□□ 1.68
CIRBP-208ENST00000586548 SHC4Q6S5L8 630 aa25.57■■□□□ 1.68
CIRBP-208ENST00000586548 CCDC148Q8NFR7 591 aa25.57■■□□□ 1.68
CIRBP-208ENST00000586548 FAM200AQ8TCP9 573 aa25.57■■□□□ 1.68
CIRBP-208ENST00000586548 GMLQ99445 158 aa25.57■■□□□ 1.68
CIRBP-208ENST00000586548 DNAJC18Q9H819 358 aa25.57■■□□□ 1.68
CIRBP-208ENST00000586548 HPSEQ9Y251 543 aa25.57■■□□□ 1.68
CIRBP-208ENST00000586548 ATF5Q9Y2D1 282 aaPredicted RBP25.57■■□□□ 1.68
CIRBP-208ENST00000586548 ATRNL1Q5VV63 1379 aa25.56■■□□□ 1.68
CIRBP-208ENST00000586548 SOCS7O14512 581 aa25.56■■□□□ 1.68
CIRBP-208ENST00000586548 BMP15O95972 392 aa25.56■■□□□ 1.68
CIRBP-208ENST00000586548 EARS2Q5JPH6 523 aaKnown RBP25.56■■□□□ 1.68
CIRBP-208ENST00000586548 USP17L2Q6R6M4 530 aa25.56■■□□□ 1.68
CIRBP-208ENST00000586548 TDRD3Q9H7E2 651 aaKnown RBP25.56■■□□□ 1.68
CIRBP-208ENST00000586548 FAM205CA6NFA0 338 aa25.55■■□□□ 1.68
CIRBP-208ENST00000586548 RAD17O75943 681 aa25.55■■□□□ 1.68
CIRBP-208ENST00000586548 ZNF202O95125 648 aa25.55■■□□□ 1.68
CIRBP-208ENST00000586548 PDHBP11177 359 aa25.55■■□□□ 1.68
CIRBP-208ENST00000586548 PTPREP23469 700 aa25.55■■□□□ 1.68
CIRBP-208ENST00000586548 ASPRV1Q53RT3 343 aa25.55■■□□□ 1.68
CIRBP-208ENST00000586548 GALNT17Q6IS24 598 aa25.55■■□□□ 1.68
CIRBP-208ENST00000586548 SH3BP5LQ7L8J4 393 aa25.55■■□□□ 1.68
CIRBP-208ENST00000586548 FOXP4Q8IVH2 680 aaPredicted RBP25.55■■□□□ 1.68
CIRBP-208ENST00000586548 ZSCAN29Q8IWY8 852 aaPredicted RBP25.55■■□□□ 1.68
CIRBP-208ENST00000586548 NIM1KQ8IY84 436 aa25.55■■□□□ 1.68
CIRBP-208ENST00000586548 GPKOWQ92917 476 aaPredicted RBP eCLIP25.55■■□□□ 1.68
CIRBP-208ENST00000586548 TIGD1Q96MW7 591 aa25.55■■□□□ 1.68
CIRBP-208ENST00000586548 FBXO2Q9UK22 296 aaPredicted RBP25.55■■□□□ 1.68
CIRBP-208ENST00000586548 HDAC9Q9UKV0 1011 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms