RNA–Protein interactions for RNA: ENST00000586134.5

ZNF540-203, Transcript of zinc finger protein 540, humanhuman

TSL 5

Gene ZNF540, Length 2,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-203ENST00000586134 TRMT1Q9NXH9 659 aaKnown RBP11.25□□□□□ -0.61
ZNF540-203ENST00000586134 ZNRF3Q9ULT6 936 aa11.25□□□□□ -0.61
ZNF540-203ENST00000586134 MAP3K2Q9Y2U5 619 aa11.25□□□□□ -0.61
ZNF540-203ENST00000586134 CAPN7Q9Y6W3 813 aa11.25□□□□□ -0.61
ZNF540-203ENST00000586134 A6NNZ2 444 aa11.25□□□□□ -0.61
ZNF540-203ENST00000586134 FMNL1O95466 1100 aaPredicted RBP11.25□□□□□ -0.61
ZNF540-203ENST00000586134 NBPF7P0C2Y1 421 aaPredicted RBP11.25□□□□□ -0.61
ZNF540-203ENST00000586134 PYGBP11216 843 aa11.25□□□□□ -0.61
ZNF540-203ENST00000586134 EPHX2P34913 555 aa11.25□□□□□ -0.61
ZNF540-203ENST00000586134 TXLNAP40222 546 aa11.25□□□□□ -0.61
ZNF540-203ENST00000586134 RPS8P62241 208 aaKnown RBP11.25□□□□□ -0.61
ZNF540-203ENST00000586134 TUBB8Q3ZCM7 444 aa11.25□□□□□ -0.61
ZNF540-203ENST00000586134 ACBD5Q5T8D3 534 aaPredicted RBP11.25□□□□□ -0.61
ZNF540-203ENST00000586134 VPS53Q5VIR6 699 aa11.25□□□□□ -0.61
ZNF540-203ENST00000586134 FOXD4L5Q5VV16 416 aaPredicted RBP11.25□□□□□ -0.61
ZNF540-203ENST00000586134 YTHDF3Q7Z739 585 aaKnown RBP11.25□□□□□ -0.61
ZNF540-203ENST00000586134 LUZP1Q86V48 1076 aa11.25□□□□□ -0.61
ZNF540-203ENST00000586134 AFAP1L1Q8TED9 768 aa11.25□□□□□ -0.61
ZNF540-203ENST00000586134 FOXD4L4Q8WXT5 416 aaPredicted RBP11.25□□□□□ -0.61
ZNF540-203ENST00000586134 TBC1D5Q92609 795 aa11.25□□□□□ -0.61
ZNF540-203ENST00000586134 DTNBP1Q96EV8 351 aa11.25□□□□□ -0.61
ZNF540-203ENST00000586134 TRIM7Q9C029 511 aa11.25□□□□□ -0.61
ZNF540-203ENST00000586134 KLC4Q9NSK0 619 aa11.25□□□□□ -0.61
ZNF540-203ENST00000586134 ZNF609O15014 1411 aa11.24□□□□□ -0.61
ZNF540-203ENST00000586134 SHTN1A0MZ66 631 aa11.24□□□□□ -0.61
ZNF540-203ENST00000586134 GOLGA6L10A6NI86 522 aa11.24□□□□□ -0.61
ZNF540-203ENST00000586134 SLC4A2P04920 1241 aa11.24□□□□□ -0.61
ZNF540-203ENST00000586134 IGKV5-2P06315 115 aa11.24□□□□□ -0.61
ZNF540-203ENST00000586134 PAX3P23760 479 aa11.24□□□□□ -0.61
ZNF540-203ENST00000586134 GCLCP48506 637 aaPredicted RBP11.24□□□□□ -0.61
ZNF540-203ENST00000586134 FLIIQ13045 1269 aa11.24□□□□□ -0.61
ZNF540-203ENST00000586134 CWF19L1Q69YN2 538 aaKnown RBP11.24□□□□□ -0.61
ZNF540-203ENST00000586134 CCDC170Q8IYT3 715 aa11.24□□□□□ -0.61
ZNF540-203ENST00000586134 PIAS4Q8N2W9 510 aaPredicted RBP11.24□□□□□ -0.61
ZNF540-203ENST00000586134 B4GALNT2Q8NHY0 566 aa11.24□□□□□ -0.61
ZNF540-203ENST00000586134 LMBR1Q8WVP7 490 aa11.24□□□□□ -0.61
ZNF540-203ENST00000586134 GOLGA1Q92805 767 aa11.24□□□□□ -0.61
ZNF540-203ENST00000586134 BICD1Q96G01 975 aa11.24□□□□□ -0.61
ZNF540-203ENST00000586134 PASKQ96RG2 1323 aa11.24□□□□□ -0.61
ZNF540-203ENST00000586134 MPHOSPH8Q99549 860 aa11.24□□□□□ -0.61
ZNF540-203ENST00000586134 PLA2G12BQ9BX93 195 aa11.24□□□□□ -0.61
ZNF540-203ENST00000586134 COL4A1P02462 1669 aa11.23□□□□□ -0.61
ZNF540-203ENST00000586134 LIN7AO14910 233 aaPredicted RBP11.23□□□□□ -0.61
ZNF540-203ENST00000586134 KIAA0754O94854 1291 aa11.23□□□□□ -0.61
ZNF540-203ENST00000586134 LMOD1P29536 600 aaPredicted RBP11.23□□□□□ -0.61
ZNF540-203ENST00000586134 CDR1P51861 262 aa11.23□□□□□ -0.61
ZNF540-203ENST00000586134 ROR2Q01974 943 aaKnown RBP11.23□□□□□ -0.61
ZNF540-203ENST00000586134 DEUP1Q05D60 604 aa11.23□□□□□ -0.61
ZNF540-203ENST00000586134 SLC30A9Q6PML9 568 aa11.23□□□□□ -0.61
ZNF540-203ENST00000586134 USP50Q70EL3 339 aaPredicted RBP11.23□□□□□ -0.61
ZNF540-203ENST00000586134 CCDC150Q8NCX0 1101 aa11.23□□□□□ -0.61
ZNF540-203ENST00000586134 ZFAND2BQ8WV99 257 aa11.23□□□□□ -0.61
ZNF540-203ENST00000586134 CELF1Q92879 486 aaKnown RBP11.23□□□□□ -0.61
ZNF540-203ENST00000586134 EYA3Q99504 573 aa11.23□□□□□ -0.61
ZNF540-203ENST00000586134 CARD6Q9BX69 1037 aa11.23□□□□□ -0.61
ZNF540-203ENST00000586134 OSBPL5Q9H0X9 879 aaPredicted RBP11.23□□□□□ -0.61
ZNF540-203ENST00000586134 GDPD2Q9HCC8 539 aa11.23□□□□□ -0.61
ZNF540-203ENST00000586134 ERICH2A1L162 156 aa11.23□□□□□ -0.61
ZNF540-203ENST00000586134 NEURL1BA8MQ27 555 aa11.23□□□□□ -0.61
ZNF540-203ENST00000586134 GBP2P32456 591 aaPredicted RBP11.23□□□□□ -0.61
ZNF540-203ENST00000586134 PEX19P40855 299 aa11.23□□□□□ -0.61
ZNF540-203ENST00000586134 TNIP1Q15025 636 aa11.23□□□□□ -0.61
ZNF540-203ENST00000586134 AOC3Q16853 763 aa11.23□□□□□ -0.61
ZNF540-203ENST00000586134 KIF4BQ2VIQ3 1234 aa11.23□□□□□ -0.61
ZNF540-203ENST00000586134 BEND6Q5SZJ8 279 aaPredicted RBP11.23□□□□□ -0.61
ZNF540-203ENST00000586134 MYSM1Q5VVJ2 828 aa11.23□□□□□ -0.61
ZNF540-203ENST00000586134 MICALCLQ6ZW33 695 aa11.23□□□□□ -0.61
ZNF540-203ENST00000586134 ARHGAP22Q7Z5H3 698 aa11.23□□□□□ -0.61
ZNF540-203ENST00000586134 LINS1Q8NG48 757 aa11.23□□□□□ -0.61
ZNF540-203ENST00000586134 SNRNP27Q8WVK2 155 aaKnown RBP11.23□□□□□ -0.61
ZNF540-203ENST00000586134 ALS2CR12Q96Q35 445 aa11.23□□□□□ -0.61
ZNF540-203ENST00000586134 VIPAS39Q9H9C1 493 aa11.23□□□□□ -0.61
ZNF540-203ENST00000586134 CREBZFQ9NS37 354 aa11.23□□□□□ -0.61
ZNF540-203ENST00000586134 ZBTB40Q9NUA8 1239 aa11.23□□□□□ -0.61
ZNF540-203ENST00000586134 SPEF2Q9C093 1822 aa11.22□□□□□ -0.61
ZNF540-203ENST00000586134 ECM2O94769 699 aaPredicted RBP11.22□□□□□ -0.61
ZNF540-203ENST00000586134 SCNN1DP51172 638 aa11.22□□□□□ -0.61
ZNF540-203ENST00000586134 EXOSC9Q06265 439 aaKnown RBP11.22□□□□□ -0.61
ZNF540-203ENST00000586134 DRP2Q13474 957 aa11.22□□□□□ -0.61
ZNF540-203ENST00000586134 SNCBQ16143 134 aa11.22□□□□□ -0.61
ZNF540-203ENST00000586134 E4F1Q66K89 784 aaPredicted RBP11.22□□□□□ -0.61
ZNF540-203ENST00000586134 CAPRIN2Q6IMN6 1127 aaKnown RBP11.22□□□□□ -0.61
ZNF540-203ENST00000586134 APLFQ8IW19 511 aaPredicted RBP11.22□□□□□ -0.61
ZNF540-203ENST00000586134 RMDN2Q96LZ7 410 aa11.22□□□□□ -0.61
ZNF540-203ENST00000586134 NUP62CLQ9H1M0 184 aa11.22□□□□□ -0.61
ZNF540-203ENST00000586134 FAM204AQ9H8W3 233 aa11.22□□□□□ -0.61
ZNF540-203ENST00000586134 DDX20Q9UHI6 824 aaKnown RBP11.22□□□□□ -0.61
ZNF540-203ENST00000586134 RAB21Q9UL25 225 aa11.22□□□□□ -0.61
ZNF540-203ENST00000586134 SYNPO2Q9UMS6 1093 aa11.22□□□□□ -0.61
ZNF540-203ENST00000586134 SYNRGQ9UMZ2 1314 aa11.21□□□□□ -0.61
ZNF540-203ENST00000586134 RASSF9O75901 435 aa11.21□□□□□ -0.61
ZNF540-203ENST00000586134 ITGBL1O95965 494 aaPredicted RBP11.21□□□□□ -0.61
ZNF540-203ENST00000586134 MYL1P05976 194 aa11.21□□□□□ -0.61
ZNF540-203ENST00000586134 FERP16591 822 aa11.21□□□□□ -0.61
ZNF540-203ENST00000586134 CTSWP56202 376 aa11.21□□□□□ -0.61
ZNF540-203ENST00000586134 CXCL9Q07325 125 aa11.21□□□□□ -0.61
ZNF540-203ENST00000586134 KCNB1Q14721 858 aa11.21□□□□□ -0.61
ZNF540-203ENST00000586134 RRP12Q5JTH9 1297 aaKnown RBP11.21□□□□□ -0.61
ZNF540-203ENST00000586134 CIAPIN1Q6FI81 312 aa11.21□□□□□ -0.61
ZNF540-203ENST00000586134 RBM43Q6ZSC3 357 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms