RNA–Protein interactions for RNA: ENST00000585913.5

CIRBP-205, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-205ENST00000585913 ROBO3Q96MS0 1386 aa25.9■■□□□ 1.74
CIRBP-205ENST00000585913 SPDYE16A6NNV3 312 aaPredicted RBP25.89■■□□□ 1.74
CIRBP-205ENST00000585913 HMGCRP04035 888 aa25.89■■□□□ 1.74
CIRBP-205ENST00000585913 PDE1AP54750 535 aa25.89■■□□□ 1.74
CIRBP-205ENST00000585913 ATP2B2Q01814 1243 aa25.89■■□□□ 1.74
CIRBP-205ENST00000585913 ZMYM1Q5SVZ6 1142 aa25.89■■□□□ 1.74
CIRBP-205ENST00000585913 STK11IPQ8N1F8 1099 aa25.89■■□□□ 1.74
CIRBP-205ENST00000585913 KANSL2Q9H9L4 492 aa25.89■■□□□ 1.74
CIRBP-205ENST00000585913 MKNK2Q9HBH9 465 aa25.89■■□□□ 1.74
CIRBP-205ENST00000585913 STAP2Q9UGK3 403 aa25.89■■□□□ 1.74
CIRBP-205ENST00000585913 PATL2C9JE40 543 aaKnown RBP25.88■■□□□ 1.73
CIRBP-205ENST00000585913 CNMDO75829 334 aa25.88■■□□□ 1.73
CIRBP-205ENST00000585913 CYP2B6P20813 491 aa25.88■■□□□ 1.73
CIRBP-205ENST00000585913 COG2Q14746 738 aa25.88■■□□□ 1.73
CIRBP-205ENST00000585913 GPR142Q7Z601 462 aa25.88■■□□□ 1.73
CIRBP-205ENST00000585913 PLEKHH3Q7Z736 793 aa25.88■■□□□ 1.73
CIRBP-205ENST00000585913 SIAH1Q8IUQ4 282 aa25.88■■□□□ 1.73
CIRBP-205ENST00000585913 EXOC6Q8TAG9 804 aa25.88■■□□□ 1.73
CIRBP-205ENST00000585913 NACAP1Q9BZK3 213 aa25.88■■□□□ 1.73
CIRBP-205ENST00000585913 VCPKMTQ9H867 229 aa25.88■■□□□ 1.73
CIRBP-205ENST00000585913 EEF2P13639 858 aaKnown RBP25.87■■□□□ 1.73
CIRBP-205ENST00000585913 KIAA1755Q5JYT7 1200 aa25.87■■□□□ 1.73
CIRBP-205ENST00000585913 IFNL3Q8IZI9 196 aa25.87■■□□□ 1.73
CIRBP-205ENST00000585913 SPICE1Q8N0Z3 855 aa25.87■■□□□ 1.73
CIRBP-205ENST00000585913 U2AF1L4Q8WU68 220 aaKnown RBP25.87■■□□□ 1.73
CIRBP-205ENST00000585913 EVI5LQ96CN4 794 aa25.87■■□□□ 1.73
CIRBP-205ENST00000585913 LNPKQ9C0E8 428 aa25.87■■□□□ 1.73
CIRBP-205ENST00000585913 HOXC10Q9NYD6 342 aa25.87■■□□□ 1.73
CIRBP-205ENST00000585913 RASA1P20936 1047 aa25.86■■□□□ 1.73
CIRBP-205ENST00000585913 WDR78Q5VTH9 848 aa25.86■■□□□ 1.73
CIRBP-205ENST00000585913 ZNF287Q9HBT7 754 aa25.86■■□□□ 1.73
CIRBP-205ENST00000585913 BTBD7Q9P203 1132 aa25.86■■□□□ 1.73
CIRBP-205ENST00000585913 GREB1LQ9C091 1923 aaPredicted RBP25.85■■□□□ 1.73
CIRBP-205ENST00000585913 WDR46O15213 610 aaKnown RBP25.85■■□□□ 1.73
CIRBP-205ENST00000585913 SGPL1O95470 568 aa25.85■■□□□ 1.73
CIRBP-205ENST00000585913 XRCC5P13010 732 aaKnown RBP25.85■■□□□ 1.73
CIRBP-205ENST00000585913 B4GALNT3Q6L9W6 998 aa25.85■■□□□ 1.73
CIRBP-205ENST00000585913 SMC5Q8IY18 1101 aa25.85■■□□□ 1.73
CIRBP-205ENST00000585913 NAPBQ9H115 298 aa25.85■■□□□ 1.73
CIRBP-205ENST00000585913 GOPCQ9HD26 462 aa25.85■■□□□ 1.73
CIRBP-205ENST00000585913 A0A0G2JMZ2 1700 aa25.84■■□□□ 1.73
CIRBP-205ENST00000585913 RGS2P41220 211 aa25.84■■□□□ 1.73
CIRBP-205ENST00000585913 MORN1Q5T089 497 aa25.84■■□□□ 1.73
CIRBP-205ENST00000585913 TRMT44Q8IYL2 757 aaKnown RBP25.84■■□□□ 1.73
CIRBP-205ENST00000585913 TRIB2Q92519 343 aa25.84■■□□□ 1.73
CIRBP-205ENST00000585913 DEFB118Q96PH6 123 aa25.84■■□□□ 1.73
CIRBP-205ENST00000585913 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.84■■□□□ 1.734e-7■■■■□ 20.4
CIRBP-205ENST00000585913 PAK6Q9NQU5 681 aaPredicted RBP25.84■■□□□ 1.73
CIRBP-205ENST00000585913 RAD21O60216 631 aa25.83■■□□□ 1.73
CIRBP-205ENST00000585913 FLOT1O75955 427 aa25.83■■□□□ 1.73
CIRBP-205ENST00000585913 ZNF444Q8N0Y2 327 aaPredicted RBP25.83■■□□□ 1.73
CIRBP-205ENST00000585913 USP6NLQ92738 828 aa25.83■■□□□ 1.73
CIRBP-205ENST00000585913 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.83■■□□□ 1.73
CIRBP-205ENST00000585913 SUPT16HQ9Y5B9 1047 aaKnown RBP25.83■■□□□ 1.73
CIRBP-205ENST00000585913 IVNS1ABPQ9Y6Y0 642 aa25.83■■□□□ 1.73
CIRBP-205ENST00000585913 RLFQ13129 1914 aa25.82■■□□□ 1.72
CIRBP-205ENST00000585913 ZKSCAN1P17029 563 aaPredicted RBP25.82■■□□□ 1.72
CIRBP-205ENST00000585913 CAPN2P17655 700 aa25.82■■□□□ 1.72
CIRBP-205ENST00000585913 DSG3P32926 999 aa25.82■■□□□ 1.72
CIRBP-205ENST00000585913 MB21D1Q8N884 522 aa25.82■■□□□ 1.72
CIRBP-205ENST00000585913 APBA2Q99767 749 aa25.82■■□□□ 1.72
CIRBP-205ENST00000585913 HMX1Q9NP08 348 aaPredicted RBP25.82■■□□□ 1.72
CIRBP-205ENST00000585913 RPTORQ8N122 1335 aa25.82■■□□□ 1.72
CIRBP-205ENST00000585913 TFRCP02786 760 aaKnown RBP25.81■■□□□ 1.72
CIRBP-205ENST00000585913 SLC3A2P08195 630 aaKnown RBP25.81■■□□□ 1.72
CIRBP-205ENST00000585913 TRIM32Q13049 653 aa25.81■■□□□ 1.72
CIRBP-205ENST00000585913 MAP2K5Q13163 448 aa25.81■■□□□ 1.72
CIRBP-205ENST00000585913 SAMD1Q6SPF0 538 aaPredicted RBP25.81■■□□□ 1.72
CIRBP-205ENST00000585913 CCDC129Q6ZRS4 1044 aa25.81■■□□□ 1.72
CIRBP-205ENST00000585913 PARP14Q460N5 1801 aa25.8■■□□□ 1.72
CIRBP-205ENST00000585913 SLC15A5A6NIM6 579 aa25.8■■□□□ 1.72
CIRBP-205ENST00000585913 PRDM1O75626 825 aa25.8■■□□□ 1.72
CIRBP-205ENST00000585913 FARP2O94887 1054 aaPredicted RBP25.8■■□□□ 1.72
CIRBP-205ENST00000585913 IGHDP01880 384 aa25.8■■□□□ 1.72
CIRBP-205ENST00000585913 PTPREP23469 700 aa25.8■■□□□ 1.72
CIRBP-205ENST00000585913 PDE4BQ07343 736 aa25.8■■□□□ 1.72
CIRBP-205ENST00000585913 CHD1LQ86WJ1 897 aa25.8■■□□□ 1.72
CIRBP-205ENST00000585913 ATG4CQ96DT6 458 aa25.8■■□□□ 1.72
CIRBP-205ENST00000585913 SPATC1LQ9H0A9 340 aa25.8■■□□□ 1.72
CIRBP-205ENST00000585913 TRIM6-TRIM34B2RNG4 842 aa25.79■■□□□ 1.72
CIRBP-205ENST00000585913 PPARAQ07869 468 aa25.79■■□□□ 1.72
CIRBP-205ENST00000585913 MOV10L1Q9BXT6 1211 aaKnown RBP25.79■■□□□ 1.72
CIRBP-205ENST00000585913 HELLSQ9NRZ9 838 aa25.79■■□□□ 1.72
CIRBP-205ENST00000585913 NYAP2Q9P242 653 aa25.79■■□□□ 1.72
CIRBP-205ENST00000585913 PRKAR2AP13861 404 aaKnown RBP25.78■■□□□ 1.72
CIRBP-205ENST00000585913 PLS1Q14651 629 aa25.78■■□□□ 1.72
CIRBP-205ENST00000585913 CCL14Q16627 93 aa25.78■■□□□ 1.72
CIRBP-205ENST00000585913 UBE2Q1Q7Z7E8 422 aa25.78■■□□□ 1.72
CIRBP-205ENST00000585913 MYH4Q9Y623 1939 aa25.77■■□□□ 1.72
CIRBP-205ENST00000585913 NUCB1Q02818 461 aa25.77■■□□□ 1.72
CIRBP-205ENST00000585913 GRB14Q14449 540 aa25.77■■□□□ 1.72
CIRBP-205ENST00000585913 MAP3K21Q5TCX8 1036 aa25.77■■□□□ 1.72
CIRBP-205ENST00000585913 TICAM2Q86XR7 235 aa25.77■■□□□ 1.72
CIRBP-205ENST00000585913 SHCBP1Q8NEM2 672 aa25.77■■□□□ 1.72
CIRBP-205ENST00000585913 CRISPLD2Q9H0B8 497 aa25.77■■□□□ 1.72
CIRBP-205ENST00000585913 TSPY3P0CV98 308 aa25.76■■□□□ 1.71
CIRBP-205ENST00000585913 TSPY8P0CW00 308 aa25.76■■□□□ 1.71
CIRBP-205ENST00000585913 HABP4Q5JVS0 413 aaKnown RBP25.76■■□□□ 1.71
CIRBP-205ENST00000585913 FAM83BQ5T0W9 1011 aa25.76■■□□□ 1.71
CIRBP-205ENST00000585913 RILPL2Q969X0 211 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms