RNA–Protein interactions for RNA: ENST00000585672.5

MBD1-212, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-212ENST00000585672 ATP6V1G2O95670 118 aa16.67■□□□□ 0.26
MBD1-212ENST00000585672 EPHB4P54760 987 aa16.67■□□□□ 0.26
MBD1-212ENST00000585672 MYO1EQ12965 1108 aa16.67■□□□□ 0.26
MBD1-212ENST00000585672 TTC39AQ5SRH9 613 aa16.67■□□□□ 0.26
MBD1-212ENST00000585672 THEMIS2Q5TEJ8 643 aa16.67■□□□□ 0.26
MBD1-212ENST00000585672 CDKAL1Q5VV42 579 aa16.67■□□□□ 0.26
MBD1-212ENST00000585672 MMGT1Q8N4V1 131 aa16.67■□□□□ 0.26
MBD1-212ENST00000585672 NUP58Q9BVL2 599 aa16.67■□□□□ 0.26
MBD1-212ENST00000585672 NOD2Q9HC29 1040 aa16.67■□□□□ 0.26
MBD1-212ENST00000585672 SERTAD1Q9UHV2 236 aa16.67■□□□□ 0.26
MBD1-212ENST00000585672 TRPC6Q9Y210 931 aa16.67■□□□□ 0.26
MBD1-212ENST00000585672 CSB-PGBD3P0DP91 1061 aa16.67■□□□□ 0.26
MBD1-212ENST00000585672 CCDC122Q5T0U0 273 aa16.67■□□□□ 0.26
MBD1-212ENST00000585672 CCDC70Q6NSX1 233 aa16.67■□□□□ 0.26
MBD1-212ENST00000585672 MIS18BP1Q6P0N0 1132 aa16.67■□□□□ 0.26
MBD1-212ENST00000585672 EMBQ6PCB8 327 aa16.67■□□□□ 0.26
MBD1-212ENST00000585672 VPS37DQ86XT2 251 aa16.67■□□□□ 0.26
MBD1-212ENST00000585672 AIFM3Q96NN9 605 aa16.67■□□□□ 0.26
MBD1-212ENST00000585672 HPS5Q9UPZ3 1129 aa16.67■□□□□ 0.26
MBD1-212ENST00000585672 HERVK_113P62684 666 aa16.66■□□□□ 0.26
MBD1-212ENST00000585672 SLC5A9Q2M3M2 681 aa16.66■□□□□ 0.26
MBD1-212ENST00000585672 FILIP1LQ4L180 1135 aa16.66■□□□□ 0.26
MBD1-212ENST00000585672 KLHL10Q6JEL2 608 aa16.66■□□□□ 0.26
MBD1-212ENST00000585672 CAVIN3Q969G5 261 aa16.66■□□□□ 0.26
MBD1-212ENST00000585672 KAZALD1Q96I82 304 aa16.66■□□□□ 0.26
MBD1-212ENST00000585672 NUP88Q99567 741 aaPredicted RBP16.66■□□□□ 0.26
MBD1-212ENST00000585672 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.66■□□□□ 0.26
MBD1-212ENST00000585672 PEAK1Q9H792 1746 aa16.66■□□□□ 0.26
MBD1-212ENST00000585672 GNAT3A8MTJ3 354 aa16.66■□□□□ 0.26
MBD1-212ENST00000585672 WASLO00401 505 aaPredicted RBP16.66■□□□□ 0.26
MBD1-212ENST00000585672 BUB1BO60566 1050 aaPredicted RBP16.66■□□□□ 0.26
MBD1-212ENST00000585672 SMNDC1O75940 238 aaKnown RBP eCLIP16.66■□□□□ 0.26
MBD1-212ENST00000585672 CD44P16070 742 aaKnown RBP16.66■□□□□ 0.26
MBD1-212ENST00000585672 CDC25CP30307 473 aa16.66■□□□□ 0.26
MBD1-212ENST00000585672 CCT6AP40227 531 aaKnown RBP16.66■□□□□ 0.26
MBD1-212ENST00000585672 ELF3P78545 371 aaPredicted RBP16.66■□□□□ 0.26
MBD1-212ENST00000585672 TRIML1Q8N9V2 468 aa16.66■□□□□ 0.26
MBD1-212ENST00000585672 KLHDC4Q8TBB5 520 aa16.66■□□□□ 0.26
MBD1-212ENST00000585672 CTAGE1Q96RT6 745 aa16.66■□□□□ 0.26
MBD1-212ENST00000585672 PPANQ9NQ55 473 aaKnown RBP16.66■□□□□ 0.26
MBD1-212ENST00000585672 POLR2DO15514 142 aaKnown RBP16.65■□□□□ 0.26
MBD1-212ENST00000585672 KRT9P35527 623 aa16.65■□□□□ 0.26
MBD1-212ENST00000585672 IQCKQ8N0W5 287 aa16.65■□□□□ 0.26
MBD1-212ENST00000585672 CUL5Q93034 780 aa16.65■□□□□ 0.26
MBD1-212ENST00000585672 NUDT16Q96DE0 195 aaKnown RBP16.65■□□□□ 0.26
MBD1-212ENST00000585672 SPAG5Q96R06 1193 aa16.65■□□□□ 0.26
MBD1-212ENST00000585672 PLCD4Q9BRC7 762 aa16.65■□□□□ 0.26
MBD1-212ENST00000585672 TTC36A6NLP5 189 aa16.65■□□□□ 0.26
MBD1-212ENST00000585672 PPARAQ07869 468 aa16.65■□□□□ 0.26
MBD1-212ENST00000585672 ARMC3Q5W041 872 aa16.65■□□□□ 0.26
MBD1-212ENST00000585672 IQCEQ6IPM2 695 aa16.65■□□□□ 0.26
MBD1-212ENST00000585672 C3orf20Q8ND61 904 aa16.65■□□□□ 0.26
MBD1-212ENST00000585672 SUCLG2Q96I99 432 aa16.65■□□□□ 0.26
MBD1-212ENST00000585672 RPS6KL1Q9Y6S9 549 aa16.65■□□□□ 0.26
MBD1-212ENST00000585672 LRRC37A3O60309 1634 aa16.65■□□□□ 0.26
MBD1-212ENST00000585672 SRRM3A6NNA2 597 aaPredicted RBP16.64■□□□□ 0.25
MBD1-212ENST00000585672 ATP2C2O75185 946 aa16.64■□□□□ 0.25
MBD1-212ENST00000585672 GRIN1Q05586 938 aa16.64■□□□□ 0.25
MBD1-212ENST00000585672 PSMD2Q13200 908 aa16.64■□□□□ 0.25
MBD1-212ENST00000585672 QPCTQ16769 361 aa16.64■□□□□ 0.25
MBD1-212ENST00000585672 TBC1D25Q3MII6 688 aa16.64■□□□□ 0.25
MBD1-212ENST00000585672 LACTB2Q53H82 288 aaPredicted RBP16.64■□□□□ 0.25
MBD1-212ENST00000585672 BAIAP2L1Q9UHR4 511 aa16.64■□□□□ 0.25
MBD1-212ENST00000585672 C15orf41Q9Y2V0 281 aa16.64■□□□□ 0.25
MBD1-212ENST00000585672 SYNRGQ9UMZ2 1314 aa16.64■□□□□ 0.25
MBD1-212ENST00000585672 ALKQ9UM73 1620 aa16.64■□□□□ 0.25
MBD1-212ENST00000585672 GOLGA8BA8MQT2 603 aa16.64■□□□□ 0.25
MBD1-212ENST00000585672 CUL4BQ13620 913 aa16.64■□□□□ 0.25
MBD1-212ENST00000585672 CWF19L2Q2TBE0 894 aaKnown RBP16.64■□□□□ 0.25
MBD1-212ENST00000585672 DDX46Q7L014 1031 aaKnown RBP16.64■□□□□ 0.25
MBD1-212ENST00000585672 CREG2Q8IUH2 290 aa16.64■□□□□ 0.25
MBD1-212ENST00000585672 EHBP1Q8NDI1 1231 aa16.64■□□□□ 0.25
MBD1-212ENST00000585672 RUBCNQ92622 972 aa16.64■□□□□ 0.25
MBD1-212ENST00000585672 ACSBG1Q96GR2 724 aa16.64■□□□□ 0.25
MBD1-212ENST00000585672 JADE2Q9NQC1 790 aa16.64■□□□□ 0.25
MBD1-212ENST00000585672 DBNLQ9UJU6 430 aaKnown RBP16.64■□□□□ 0.25
MBD1-212ENST00000585672 SPATA31D1Q6ZQQ2 1576 aa16.64■□□□□ 0.25
MBD1-212ENST00000585672 KLF18A0A0U1RQI7 1052 aa16.63■□□□□ 0.25
MBD1-212ENST00000585672 PRPHP41219 470 aa16.63■□□□□ 0.25
MBD1-212ENST00000585672 BYSLQ13895 437 aaKnown RBP16.63■□□□□ 0.25
MBD1-212ENST00000585672 FBXL16Q8N461 479 aa16.63■□□□□ 0.25
MBD1-212ENST00000585672 CCDC47Q96A33 483 aaKnown RBP16.63■□□□□ 0.25
MBD1-212ENST00000585672 CCDC43Q96MW1 224 aaKnown RBP16.63■□□□□ 0.25
MBD1-212ENST00000585672 YIPF3Q9GZM5 350 aa16.63■□□□□ 0.25
MBD1-212ENST00000585672 LEMD3Q9Y2U8 911 aa16.63■□□□□ 0.25
MBD1-212ENST00000585672 C3P01024 1663 aa16.63■□□□□ 0.25
MBD1-212ENST00000585672 MYH8P13535 1937 aa16.63■□□□□ 0.25
MBD1-212ENST00000585672 CPLX1O14810 134 aa16.63■□□□□ 0.25
MBD1-212ENST00000585672 ANP32DO95626 131 aa16.63■□□□□ 0.25
MBD1-212ENST00000585672 ITGB3BPQ13352 177 aaPredicted RBP16.63■□□□□ 0.25
MBD1-212ENST00000585672 CCDC181Q5TID7 509 aa16.63■□□□□ 0.25
MBD1-212ENST00000585672 KRI1Q8N9T8 703 aaKnown RBP16.63■□□□□ 0.25
MBD1-212ENST00000585672 SPATA20Q8TB22 786 aa16.63■□□□□ 0.25
MBD1-212ENST00000585672 PIK3R5Q8WYR1 880 aa16.63■□□□□ 0.25
MBD1-212ENST00000585672 ZNF570Q96NI8 536 aa16.63■□□□□ 0.25
MBD1-212ENST00000585672 KDRP35968 1356 aa16.63■□□□□ 0.25
MBD1-212ENST00000585672 RCCD1A6NED2 376 aa16.62■□□□□ 0.25
MBD1-212ENST00000585672 DNAJC8O75937 253 aaPredicted RBP16.62■□□□□ 0.25
MBD1-212ENST00000585672 IDEP14735 1019 aa16.62■□□□□ 0.25
MBD1-212ENST00000585672 PPARDQ03181 441 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms