RNA–Protein interactions for RNA: ENST00000585652.5

AP3D1-203, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 2

Gene AP3D1, Length 4,433 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-203ENST00000585652 DCAF17Q5H9S7 520 aaPredicted RBP14.66□□□□□ -0.06
AP3D1-203ENST00000585652 CERS3Q8IU89 383 aa14.66□□□□□ -0.06
AP3D1-203ENST00000585652 CACTINQ8WUQ7 758 aaKnown RBP14.66□□□□□ -0.06
AP3D1-203ENST00000585652 TEKT1Q969V4 418 aa14.66□□□□□ -0.06
AP3D1-203ENST00000585652 DESI2Q9BSY9 194 aa14.66□□□□□ -0.06
AP3D1-203ENST00000585652 RIPOR2Q9Y4F9 1068 aa14.66□□□□□ -0.06
AP3D1-203ENST00000585652 USP42Q9H9J4 1324 aaKnown RBP14.66□□□□□ -0.06
AP3D1-203ENST00000585652 TACC1O75410 805 aa14.66□□□□□ -0.06
AP3D1-203ENST00000585652 TUBB4AP04350 444 aa14.66□□□□□ -0.06
AP3D1-203ENST00000585652 EVCP57679 992 aa14.66□□□□□ -0.06
AP3D1-203ENST00000585652 HERC4Q5GLZ8 1057 aaPredicted RBP14.66□□□□□ -0.06
AP3D1-203ENST00000585652 PCDHB6Q9Y5E3 794 aa14.66□□□□□ -0.06
AP3D1-203ENST00000585652 NEDD4P46934 1319 aa14.66□□□□□ -0.06
AP3D1-203ENST00000585652 XDHP47989 1333 aa14.66□□□□□ -0.06
AP3D1-203ENST00000585652 NEURL4Q96JN8 1562 aa14.66□□□□□ -0.06
AP3D1-203ENST00000585652 CCDC65Q8IXS2 484 aa14.65□□□□□ -0.06
AP3D1-203ENST00000585652 SMYD4Q8IYR2 804 aaPredicted RBP14.65□□□□□ -0.06
AP3D1-203ENST00000585652 SCLT1Q96NL6 688 aa14.65□□□□□ -0.06
AP3D1-203ENST00000585652 LZTS2Q9BRK4 669 aa14.65□□□□□ -0.06
AP3D1-203ENST00000585652 FOXP1Q9H334 677 aaPredicted RBP14.65□□□□□ -0.06
AP3D1-203ENST00000585652 BSDC1Q9NW68 430 aaPredicted RBP14.65□□□□□ -0.06
AP3D1-203ENST00000585652 MMP1P03956 469 aa14.65□□□□□ -0.06
AP3D1-203ENST00000585652 ELF2Q15723 593 aa14.65□□□□□ -0.06
AP3D1-203ENST00000585652 CNNM4Q6P4Q7 775 aa14.65□□□□□ -0.06
AP3D1-203ENST00000585652 LARGE2Q8N3Y3 721 aa14.65□□□□□ -0.06
AP3D1-203ENST00000585652 GOLGA1Q92805 767 aa14.65□□□□□ -0.06
AP3D1-203ENST00000585652 POTEB2H3BUK9 544 aa14.65□□□□□ -0.06
AP3D1-203ENST00000585652 DDAH1O94760 285 aa14.65□□□□□ -0.06
AP3D1-203ENST00000585652 MCM3P25205 808 aa14.65□□□□□ -0.06
AP3D1-203ENST00000585652 U2AF2P26368 475 aaKnown RBP eCLIP14.65□□□□□ -0.061e-7■■■■■ 32.6
AP3D1-203ENST00000585652 HS2ST1Q7LGA3 356 aa14.65□□□□□ -0.06
AP3D1-203ENST00000585652 BICD1Q96G01 975 aa14.65□□□□□ -0.06
AP3D1-203ENST00000585652 MINPP1Q9UNW1 487 aa14.65□□□□□ -0.06
AP3D1-203ENST00000585652 RDXP35241 583 aaKnown RBP14.65□□□□□ -0.06
AP3D1-203ENST00000585652 RFX5P48382 616 aaPredicted RBP14.65□□□□□ -0.06
AP3D1-203ENST00000585652 GOLGA8FQ08AF8 430 aa14.65□□□□□ -0.06
AP3D1-203ENST00000585652 GOLGA8DPQ0D2H9 430 aa14.65□□□□□ -0.06
AP3D1-203ENST00000585652 NELFCDQ8IXH7 590 aa14.65□□□□□ -0.06
AP3D1-203ENST00000585652 ZNF609O15014 1411 aa14.64□□□□□ -0.07
AP3D1-203ENST00000585652 A0A0G2JLW4 131 aa14.64□□□□□ -0.07
AP3D1-203ENST00000585652 PPP4R3AQ6IN85 833 aa14.64□□□□□ -0.07
AP3D1-203ENST00000585652 CPXCR1Q8N123 301 aa14.64□□□□□ -0.07
AP3D1-203ENST00000585652 QTRT2Q9H974 415 aaKnown RBP14.64□□□□□ -0.07
AP3D1-203ENST00000585652 NCAPH2Q6IBW4 605 aa14.64□□□□□ -0.07
AP3D1-203ENST00000585652 CLEC4GQ6UXB4 293 aa14.64□□□□□ -0.07
AP3D1-203ENST00000585652 MB21D2Q8IYB1 491 aaPredicted RBP14.64□□□□□ -0.07
AP3D1-203ENST00000585652 SLF1Q9BQI6 1058 aa14.64□□□□□ -0.07
AP3D1-203ENST00000585652 LEMD3Q9Y2U8 911 aa14.64□□□□□ -0.07
AP3D1-203ENST00000585652 USP32Q8NFA0 1604 aa14.64□□□□□ -0.07
AP3D1-203ENST00000585652 VGLL3A8MV65 326 aa14.64□□□□□ -0.07
AP3D1-203ENST00000585652 PPP6R2O75170 966 aa14.64□□□□□ -0.07
AP3D1-203ENST00000585652 CFBP00751 764 aa14.64□□□□□ -0.07
AP3D1-203ENST00000585652 CYP2D6P10635 497 aa14.64□□□□□ -0.07
AP3D1-203ENST00000585652 ALDH1B1P30837 517 aa14.64□□□□□ -0.07
AP3D1-203ENST00000585652 SMAP1Q8IYB5 467 aaPredicted RBP14.64□□□□□ -0.07
AP3D1-203ENST00000585652 CTNNBL1Q8WYA6 563 aaPredicted RBP14.64□□□□□ -0.07
AP3D1-203ENST00000585652 ERO1AQ96HE7 468 aa14.64□□□□□ -0.07
AP3D1-203ENST00000585652 GOPCQ9HD26 462 aa14.64□□□□□ -0.07
AP3D1-203ENST00000585652 CDHR2Q9BYE9 1310 aa14.64□□□□□ -0.07
AP3D1-203ENST00000585652 USP17L3A6NCW0 530 aa14.63□□□□□ -0.07
AP3D1-203ENST00000585652 USP17L4A6NCW7 530 aa14.63□□□□□ -0.07
AP3D1-203ENST00000585652 SEMA3EO15041 775 aa14.63□□□□□ -0.07
AP3D1-203ENST00000585652 PLEKHA8P1O95397 391 aa14.63□□□□□ -0.07
AP3D1-203ENST00000585652 RAPGEF1Q13905 1077 aa14.63□□□□□ -0.07
AP3D1-203ENST00000585652 USP17L1Q7RTZ2 530 aa14.63□□□□□ -0.07
AP3D1-203ENST00000585652 BCCIPQ9P287 314 aaKnown RBP eCLIP14.63□□□□□ -0.074e-6■■■■□ 19.6
AP3D1-203ENST00000585652 LMAN1P49257 510 aa14.63□□□□□ -0.07
AP3D1-203ENST00000585652 CCDC174Q6PII3 467 aa14.63□□□□□ -0.07
AP3D1-203ENST00000585652 CEP112Q8N8E3 955 aa14.63□□□□□ -0.07
AP3D1-203ENST00000585652 PHACTR2O75167 634 aa14.63□□□□□ -0.07
AP3D1-203ENST00000585652 POTEJP0CG39 1038 aa14.63□□□□□ -0.07
AP3D1-203ENST00000585652 CDC27P30260 824 aa14.63□□□□□ -0.07
AP3D1-203ENST00000585652 TBC1D9BQ66K14 1250 aa14.63□□□□□ -0.07
AP3D1-203ENST00000585652 NAA15Q9BXJ9 866 aaKnown RBP14.63□□□□□ -0.07
AP3D1-203ENST00000585652 CCDC113Q9H0I3 377 aa14.63□□□□□ -0.07
AP3D1-203ENST00000585652 KRT13P13646 458 aa14.63□□□□□ -0.07
AP3D1-203ENST00000585652 CTR9Q6PD62 1173 aa14.63□□□□□ -0.07
AP3D1-203ENST00000585652 MAEAQ7L5Y9 396 aa14.63□□□□□ -0.07
AP3D1-203ENST00000585652 PPIP5K2O43314 1243 aa14.62□□□□□ -0.07
AP3D1-203ENST00000585652 TSGA10IPQ3SY00 556 aa14.62□□□□□ -0.07
AP3D1-203ENST00000585652 BCL2L12Q9HB09 334 aa14.62□□□□□ -0.07
AP3D1-203ENST00000585652 PCP11498 1178 aaKnown RBP14.62□□□□□ -0.07
AP3D1-203ENST00000585652 NEFHP12036 1026 aa14.62□□□□□ -0.07
AP3D1-203ENST00000585652 PPP2R3AQ06190 1150 aa14.62□□□□□ -0.07
AP3D1-203ENST00000585652 CKAP4Q07065 602 aaKnown RBP14.62□□□□□ -0.07
AP3D1-203ENST00000585652 EPSTI1Q96J88 318 aa14.62□□□□□ -0.07
AP3D1-203ENST00000585652 ATP1A3P13637 1013 aa14.62□□□□□ -0.07
AP3D1-203ENST00000585652 USP17L2Q6R6M4 530 aa14.62□□□□□ -0.07
AP3D1-203ENST00000585652 FAM207AQ9NSI2 230 aaPredicted RBP14.62□□□□□ -0.07
AP3D1-203ENST00000585652 STK32BQ9NY57 414 aa14.62□□□□□ -0.07
AP3D1-203ENST00000585652 THRAP3Q9Y2W1 955 aaKnown RBP14.62□□□□□ -0.07
AP3D1-203ENST00000585652 GJA3Q9Y6H8 435 aa14.62□□□□□ -0.07
AP3D1-203ENST00000585652 NMT2O60551 498 aa14.61□□□□□ -0.07
AP3D1-203ENST00000585652 NEK8Q86SG6 692 aa14.61□□□□□ -0.07
AP3D1-203ENST00000585652 FNBP4Q8N3X1 1017 aaPredicted RBP14.61□□□□□ -0.07
AP3D1-203ENST00000585652 GSG1L2A8MUP6 293 aa14.61□□□□□ -0.07
AP3D1-203ENST00000585652 DDX39AO00148 427 aaKnown RBP14.61□□□□□ -0.07
AP3D1-203ENST00000585652 RPS6KA4O75676 772 aa14.61□□□□□ -0.07
AP3D1-203ENST00000585652 CYP26C1Q6V0L0 522 aa14.61□□□□□ -0.07
AP3D1-203ENST00000585652 GOLPH3LQ9H4A5 285 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms