RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 CNGA1P29973 690 aa13.62□□□□□ -0.23
CCDC47-206ENST00000584112 MCAMP43121 646 aa13.62□□□□□ -0.23
CCDC47-206ENST00000584112 PTPN5P54829 565 aa13.62□□□□□ -0.23
CCDC47-206ENST00000584112 TTC39AQ5SRH9 613 aa13.62□□□□□ -0.23
CCDC47-206ENST00000584112 CCDC84Q86UT8 332 aaPredicted RBP13.62□□□□□ -0.23
CCDC47-206ENST00000584112 ZSCAN29Q8IWY8 852 aaPredicted RBP13.62□□□□□ -0.23
CCDC47-206ENST00000584112 CNTNAP3BQ96NU0 1288 aa13.62□□□□□ -0.23
CCDC47-206ENST00000584112 CNTNAP3Q9BZ76 1288 aa13.62□□□□□ -0.23
CCDC47-206ENST00000584112 RAI14Q9P0K7 980 aa13.62□□□□□ -0.23
CCDC47-206ENST00000584112 AGTPBP1Q9UPW5 1226 aa13.62□□□□□ -0.23
CCDC47-206ENST00000584112 NOP58Q9Y2X3 529 aaKnown RBP13.62□□□□□ -0.23
CCDC47-206ENST00000584112 AFG3L2Q9Y4W6 797 aa13.62□□□□□ -0.23
CCDC47-206ENST00000584112 MYH7P12883 1935 aa13.62□□□□□ -0.23
CCDC47-206ENST00000584112 SETXQ7Z333 2677 aaKnown RBP13.61□□□□□ -0.23
CCDC47-206ENST00000584112 ATRNL1Q5VV63 1379 aa13.61□□□□□ -0.23
CCDC47-206ENST00000584112 TRIM75PA6NK02 468 aa13.61□□□□□ -0.23
CCDC47-206ENST00000584112 KIAA0355O15063 1070 aa13.61□□□□□ -0.23
CCDC47-206ENST00000584112 CLTBP09497 229 aa13.61□□□□□ -0.23
CCDC47-206ENST00000584112 TCF15Q12870 199 aa13.61□□□□□ -0.23
CCDC47-206ENST00000584112 RAB30Q15771 203 aa13.61□□□□□ -0.23
CCDC47-206ENST00000584112 TMEM240Q5SV17 173 aa13.61□□□□□ -0.23
CCDC47-206ENST00000584112 RASIP1Q5U651 963 aa13.61□□□□□ -0.23
CCDC47-206ENST00000584112 ANO1Q5XXA6 986 aa13.61□□□□□ -0.23
CCDC47-206ENST00000584112 PI16Q6UXB8 463 aa13.61□□□□□ -0.23
CCDC47-206ENST00000584112 FAM178BQ8IXR5 827 aa13.61□□□□□ -0.23
CCDC47-206ENST00000584112 NSUN4Q96CB9 384 aaKnown RBP13.61□□□□□ -0.23
CCDC47-206ENST00000584112 LRP2BPQ9P2M1 347 aa13.61□□□□□ -0.23
CCDC47-206ENST00000584112 TACC3Q9Y6A5 838 aa13.61□□□□□ -0.23
CCDC47-206ENST00000584112 SIPA1L1O43166 1804 aa13.61□□□□□ -0.23
CCDC47-206ENST00000584112 DMXL1Q9Y485 3027 aa13.61□□□□□ -0.23
CCDC47-206ENST00000584112 DMDP11532 3685 aa13.6□□□□□ -0.23
CCDC47-206ENST00000584112 FASNP49327 2511 aaKnown RBP13.6□□□□□ -0.23
CCDC47-206ENST00000584112 VPS13AQ96RL7 3174 aa13.6□□□□□ -0.23
CCDC47-206ENST00000584112 IGSF3O75054 1194 aa13.6□□□□□ -0.23
CCDC47-206ENST00000584112 PTPRAP18433 802 aa13.6□□□□□ -0.23
CCDC47-206ENST00000584112 ADCYAP1R1P41586 468 aa13.6□□□□□ -0.23
CCDC47-206ENST00000584112 ID4P47928 161 aa13.6□□□□□ -0.23
CCDC47-206ENST00000584112 PLXNA3P51805 1871 aa13.6□□□□□ -0.23
CCDC47-206ENST00000584112 PICALMQ13492 652 aa13.6□□□□□ -0.23
CCDC47-206ENST00000584112 TBC1D9Q6ZT07 1266 aa13.6□□□□□ -0.23
CCDC47-206ENST00000584112 ZFPM1Q8IX07 1006 aa13.6□□□□□ -0.23
CCDC47-206ENST00000584112 TRMT44Q8IYL2 757 aaKnown RBP13.6□□□□□ -0.23
CCDC47-206ENST00000584112 ZNF384Q8TF68 577 aa13.6□□□□□ -0.23
CCDC47-206ENST00000584112 USP6NLQ92738 828 aa13.6□□□□□ -0.23
CCDC47-206ENST00000584112 ZNF512BQ96KM6 892 aaPredicted RBP13.6□□□□□ -0.23
CCDC47-206ENST00000584112 DBNDD2Q9BQY9 259 aa13.6□□□□□ -0.23
CCDC47-206ENST00000584112 NOL10Q9BSC4 688 aaKnown RBP13.6□□□□□ -0.23
CCDC47-206ENST00000584112 FLRT1Q9NZU1 646 aa13.6□□□□□ -0.23
CCDC47-206ENST00000584112 MYH8P13535 1937 aa13.6□□□□□ -0.23
CCDC47-206ENST00000584112 GVINP1Q7Z2Y8 2422 aa13.59□□□□□ -0.23
CCDC47-206ENST00000584112 LOC285556D6RIA3 1793 aa13.59□□□□□ -0.23
CCDC47-206ENST00000584112 DCXO43602 365 aa13.59□□□□□ -0.23
CCDC47-206ENST00000584112 MYOGP15173 224 aa13.59□□□□□ -0.23
CCDC47-206ENST00000584112 RHBDL3P58872 404 aa13.59□□□□□ -0.23
CCDC47-206ENST00000584112 MAP3K10Q02779 954 aa13.59□□□□□ -0.23
CCDC47-206ENST00000584112 CEP85Q6P2H3 762 aa13.59□□□□□ -0.23
CCDC47-206ENST00000584112 ERC1Q8IUD2 1116 aa13.59□□□□□ -0.23
CCDC47-206ENST00000584112 PANK1Q8TE04 598 aa13.59□□□□□ -0.23
CCDC47-206ENST00000584112 SOCS4Q8WXH5 440 aa13.59□□□□□ -0.23
CCDC47-206ENST00000584112 DDX4Q9NQI0 724 aaKnown RBP13.59□□□□□ -0.23
CCDC47-206ENST00000584112 PICK1Q9NRD5 415 aa13.59□□□□□ -0.23
CCDC47-206ENST00000584112 RALYQ9UKM9 306 aaKnown RBP13.59□□□□□ -0.23
CCDC47-206ENST00000584112 MAP1BP46821 2468 aaKnown RBP13.59□□□□□ -0.23
CCDC47-206ENST00000584112 TECTAO75443 2155 aa13.59□□□□□ -0.23
CCDC47-206ENST00000584112 SOWAHBA6NEL2 793 aa13.58□□□□□ -0.24
CCDC47-206ENST00000584112 DDTLA6NHG4 134 aaPredicted RBP13.58□□□□□ -0.24
CCDC47-206ENST00000584112 KBTBD13C9JR72 458 aa13.58□□□□□ -0.24
CCDC47-206ENST00000584112 BAG3O95817 575 aa13.58□□□□□ -0.24
CCDC47-206ENST00000584112 PLCG2P16885 1265 aa13.58□□□□□ -0.24
CCDC47-206ENST00000584112 GCLCP48506 637 aaPredicted RBP13.58□□□□□ -0.24
CCDC47-206ENST00000584112 RABGGTBP53611 331 aa13.58□□□□□ -0.24
CCDC47-206ENST00000584112 HSP90AB4PQ58FF6 505 aa13.58□□□□□ -0.24
CCDC47-206ENST00000584112 NAA16Q6N069 864 aaPredicted RBP13.58□□□□□ -0.24
CCDC47-206ENST00000584112 SH3BP5LQ7L8J4 393 aa13.58□□□□□ -0.24
CCDC47-206ENST00000584112 SCYL3Q8IZE3 742 aa13.58□□□□□ -0.24
CCDC47-206ENST00000584112 TRPV1Q8NER1 839 aa13.58□□□□□ -0.24
CCDC47-206ENST00000584112 CHMP4BQ9H444 224 aaKnown RBP13.58□□□□□ -0.24
CCDC47-206ENST00000584112 PNMA3Q9UL41 463 aa13.58□□□□□ -0.24
CCDC47-206ENST00000584112 DDX19BQ9UMR2 479 aa13.58□□□□□ -0.24
CCDC47-206ENST00000584112 COL4A6Q14031 1691 aa13.58□□□□□ -0.24
CCDC47-206ENST00000584112 DNAH14Q0VDD8 3507 aa13.57□□□□□ -0.24
CCDC47-206ENST00000584112 POTEB3A0JP26 581 aa13.57□□□□□ -0.24
CCDC47-206ENST00000584112 EPOPA6NHQ4 379 aa13.57□□□□□ -0.24
CCDC47-206ENST00000584112 PHF20L1A8MW92 1017 aa13.57□□□□□ -0.24
CCDC47-206ENST00000584112 TBC1D12O60347 775 aa13.57□□□□□ -0.24
CCDC47-206ENST00000584112 CTNND1O60716 968 aaKnown RBP13.57□□□□□ -0.24
CCDC47-206ENST00000584112 PQBP1O60828 265 aaKnown RBP13.57□□□□□ -0.24
CCDC47-206ENST00000584112 ACRP10323 421 aa13.57□□□□□ -0.24
CCDC47-206ENST00000584112 PPP2R2DQ66LE6 453 aa13.57□□□□□ -0.24
CCDC47-206ENST00000584112 POTEBQ6S5H4 581 aa13.57□□□□□ -0.24
CCDC47-206ENST00000584112 SAMD1Q6SPF0 538 aaPredicted RBP13.57□□□□□ -0.24
CCDC47-206ENST00000584112 TEX11Q8IYF3 940 aa13.57□□□□□ -0.24
CCDC47-206ENST00000584112 MFSD14AQ96MC6 490 aa13.57□□□□□ -0.24
CCDC47-206ENST00000584112 CERS4Q9HA82 394 aa13.57□□□□□ -0.24
CCDC47-206ENST00000584112 SNRKQ9NRH2 765 aa13.57□□□□□ -0.24
CCDC47-206ENST00000584112 TMEM39AQ9NV64 488 aa13.57□□□□□ -0.24
CCDC47-206ENST00000584112 NAV1Q8NEY1 1877 aa13.57□□□□□ -0.24
CCDC47-206ENST00000584112 SLURP2P0DP57 97 aa13.56□□□□□ -0.24
CCDC47-206ENST00000584112 RGS2P41220 211 aa13.56□□□□□ -0.24
CCDC47-206ENST00000584112 ZNF365Q70YC5 407 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms