RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-231	ENST00000584063	CD151	P48509	253 aa		13.18	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	GTF2A1	P52655	376 aa	Predicted RBP	13.18	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	TXNRD1	Q16881	649 aa		13.18	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	GRAMD1C	Q8IYS0	662 aa		13.18	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	MRRF	Q96E11	262 aa	Known RBP	13.18	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	ALG1	Q9BT22	464 aa		13.18	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	RTEL1	Q9NZ71	1219 aa		13.18	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	MKRN1	Q9UHC7	482 aa	Known RBP	13.18	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	MINPP1	Q9UNW1	487 aa		13.18	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	ZNF232	Q9UNY5	417 aa		13.18	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	KLRK1	P26718	216 aa		13.17	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	METAP2	P50579	478 aa	Known RBP eCLIP	13.17	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	FANCC	Q00597	558 aa		13.17	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	EVX2	Q03828	476 aa		13.17	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	TRMT44	Q8IYL2	757 aa	Known RBP	13.17	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	RBM46	Q8TBY0	533 aa	Known RBP	13.17	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	ZSWIM4	Q9H7M6	989 aa		13.17	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	FAN1	Q9Y2M0	1017 aa		13.17	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	TCRBV5S4A2T	A0A5A2	114 aa		13.17	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	SH2B2	O14492	632 aa	Predicted RBP	13.17	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	SEC31A	O94979	1220 aa	Known RBP	13.17	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	SLU7	O95391	586 aa	Known RBP	13.17	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	COPB2	P35606	906 aa		13.17	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	EVC	P57679	992 aa		13.17	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.17	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	ANO1	Q5XXA6	986 aa		13.17	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	NFXL1	Q6ZNB6	911 aa		13.17	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	PHC3	Q8NDX5	983 aa		13.17	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	ENOX1	Q8TC92	643 aa	Known RBP	13.17	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	hCG_1642624	A0A1W2PR95	340 aa		13.16	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	POLR3G	O15318	223 aa	Predicted RBP	13.16	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	URI1	O94763	535 aa	Predicted RBP	13.16	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	ZFY	P08048	801 aa	Predicted RBP	13.16	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	GRIN1	Q05586	938 aa		13.16	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	KRT40	Q6A162	431 aa		13.16	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	APOA5	Q6Q788	366 aa		13.16	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	POTEA	Q6S8J7	498 aa		13.16	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	PROM2	Q8N271	834 aa		13.16	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	AIDA	Q96BJ3	306 aa		13.16	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	GPR101	Q96P66	508 aa	Predicted RBP	13.16	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	FAM217B	Q9NTX9	383 aa	Predicted RBP	13.16	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	KCNJ14	Q9UNX9	436 aa		13.16	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	COL4A1	P02462	1669 aa		13.16	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	PPP1R12A	O14974	1030 aa	Predicted RBP	13.16	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	FANCG	O15287	622 aa		13.16	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	UBASH3A	P57075	661 aa		13.16	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	SF3B2	Q13435	895 aa	Known RBP	13.16	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	NCAPH	Q15003	741 aa		13.16	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	ARHGAP29	Q52LW3	1261 aa		13.16	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	ICE2	Q659A1	982 aa		13.16	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	MSL1	Q68DK7	614 aa		13.16	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	LCORL	Q8N3X6	602 aa		13.16	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	STRBP	Q96SI9	672 aa	Known RBP	13.16	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	FEZ1	Q99689	392 aa		13.16	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	FANCL	Q9NW38	375 aa		13.16	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	ANGEL1	Q9UNK9	670 aa	Known RBP	13.16	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	AKAP11	Q9UKA4	1901 aa		13.16	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	IPO5	O00410	1097 aa	Known RBP	13.15	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	CAND2	O75155	1236 aa		13.15	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	SYK	P43405	635 aa		13.15	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	ZNF397	Q8NF99	534 aa	Predicted RBP	13.15	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	ZSWIM5	Q9P217	1185 aa		13.15	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	RGS17	Q9UGC6	210 aa	Predicted RBP	13.15	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	SLFN14	P0C7P3	912 aa		13.15	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	UQCRFS1P1	P0C7P4	283 aa		13.15	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	FGFR2	P21802	821 aa		13.15	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	RXRB	P28702	533 aa		13.15	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	ABL2	P42684	1182 aa		13.15	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	ADK	P55263	362 aa	Known RBP	13.15	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	TRDN	Q13061	729 aa		13.15	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	CAVIN4	Q5BKX8	364 aa		13.15	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	ADGRA1	Q86SQ6	560 aa		13.15	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	OGFOD1	Q8N543	542 aa		13.15	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	SREK1	Q8WXA9	508 aa	Known RBP	13.15	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	SLC26A6	Q9BXS9	759 aa		13.15	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	MYH15	Q9Y2K3	1946 aa		13.15	□□□□□ -0.3
CDK5RAP3-231	ENST00000584063	CYP2D7	A0A087X1C5	515 aa		13.15	□□□□□ -0.31
CDK5RAP3-231	ENST00000584063	PDE4B	Q07343	736 aa		13.15	□□□□□ -0.31
CDK5RAP3-231	ENST00000584063	SF3B3	Q15393	1217 aa	Known RBP	13.15	□□□□□ -0.31
CDK5RAP3-231	ENST00000584063	TMEM67	Q5HYA8	995 aa		13.15	□□□□□ -0.31
CDK5RAP3-231	ENST00000584063	ZNF772	Q68DY9	489 aa	Predicted RBP	13.15	□□□□□ -0.31
CDK5RAP3-231	ENST00000584063	SHC4	Q6S5L8	630 aa		13.15	□□□□□ -0.31
CDK5RAP3-231	ENST00000584063	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.15	□□□□□ -0.31
CDK5RAP3-231	ENST00000584063	IGDCC4	Q8TDY8	1250 aa		13.15	□□□□□ -0.31
CDK5RAP3-231	ENST00000584063	DESI2	Q9BSY9	194 aa		13.15	□□□□□ -0.31
CDK5RAP3-231	ENST00000584063	LY9	Q9HBG7	655 aa		13.15	□□□□□ -0.31
CDK5RAP3-231	ENST00000584063	GOLGA8A	A7E2F4	631 aa		13.14	□□□□□ -0.31
CDK5RAP3-231	ENST00000584063	CASP1	P29466	404 aa		13.14	□□□□□ -0.31
CDK5RAP3-231	ENST00000584063	MAP3K12	Q12852	859 aa		13.14	□□□□□ -0.31
CDK5RAP3-231	ENST00000584063	TTF1	Q15361	905 aa	Predicted RBP	13.14	□□□□□ -0.31
CDK5RAP3-231	ENST00000584063	IFNL3	Q8IZI9	196 aa		13.14	□□□□□ -0.31
CDK5RAP3-231	ENST00000584063	KRT222	Q8N1A0	295 aa		13.14	□□□□□ -0.31
CDK5RAP3-231	ENST00000584063	SDR42E1	Q8WUS8	393 aa		13.14	□□□□□ -0.31
CDK5RAP3-231	ENST00000584063	TAF4B	Q92750	862 aa		13.14	□□□□□ -0.31
CDK5RAP3-231	ENST00000584063	HSD3B7	Q9H2F3	369 aa		13.14	□□□□□ -0.31
CDK5RAP3-231	ENST00000584063	TAF1	P21675	1872 aa		13.14	□□□□□ -0.31
CDK5RAP3-231	ENST00000584063	CAVIN2	O95810	425 aa		13.14	□□□□□ -0.31
CDK5RAP3-231	ENST00000584063	SERPINB2	P05120	415 aa		13.14	□□□□□ -0.31
CDK5RAP3-231	ENST00000584063	GYS1	P13807	737 aa		13.14	□□□□□ -0.31
CDK5RAP3-231	ENST00000584063	NLRP12	P59046	1061 aa		13.14	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms