RNA–Protein interactions for RNA: ENST00000583683.1

NDEL1-217, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 1,802 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-217ENST00000583683 CCDC196A0A1B0GTZ2 297 aa21.16■□□□□ 0.98
NDEL1-217ENST00000583683 CPLX1O14810 134 aa21.16■□□□□ 0.98
NDEL1-217ENST00000583683 MAP1SQ66K74 1059 aaPredicted RBP21.16■□□□□ 0.98
NDEL1-217ENST00000583683 USP2O75604 605 aaPredicted RBP21.15■□□□□ 0.98
NDEL1-217ENST00000583683 GJB2P29033 226 aa21.15■□□□□ 0.98
NDEL1-217ENST00000583683 LDHDQ86WU2 507 aa21.15■□□□□ 0.98
NDEL1-217ENST00000583683 CTCFLQ8NI51 663 aaPredicted RBP21.15■□□□□ 0.98
NDEL1-217ENST00000583683 OTOFQ9HC10 1997 aa21.15■□□□□ 0.98
NDEL1-217ENST00000583683 PTPDC1A2A3K4 754 aa21.15■□□□□ 0.98
NDEL1-217ENST00000583683 RASGRP2Q7LDG7 609 aa21.15■□□□□ 0.98
NDEL1-217ENST00000583683 GINM1Q9NU53 330 aa21.15■□□□□ 0.98
NDEL1-217ENST00000583683 RBM28Q9NW13 759 aaKnown RBP21.15■□□□□ 0.98
NDEL1-217ENST00000583683 MTMR7Q9Y216 660 aa21.15■□□□□ 0.98
NDEL1-217ENST00000583683 A0A1W2PRG0 241 aa21.14■□□□□ 0.97
NDEL1-217ENST00000583683 PPFIA3O75145 1194 aa21.14■□□□□ 0.97
NDEL1-217ENST00000583683 PDHBP11177 359 aa21.14■□□□□ 0.97
NDEL1-217ENST00000583683 PRKG1Q13976 671 aa21.14■□□□□ 0.97
NDEL1-217ENST00000583683 GRM4Q14833 912 aa21.14■□□□□ 0.97
NDEL1-217ENST00000583683 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.14■□□□□ 0.97
NDEL1-217ENST00000583683 ZKSCAN4Q969J2 545 aaPredicted RBP21.14■□□□□ 0.97
NDEL1-217ENST00000583683 CPLX2Q6PUV4 134 aaKnown RBP21.13■□□□□ 0.97
NDEL1-217ENST00000583683 SCYL3Q8IZE3 742 aa21.13■□□□□ 0.97
NDEL1-217ENST00000583683 CMTR1Q8N1G2 835 aaKnown RBP21.13■□□□□ 0.97
NDEL1-217ENST00000583683 DDX11Q96FC9 970 aa21.13■□□□□ 0.97
NDEL1-217ENST00000583683 MAD2L2Q9UI95 211 aa21.13■□□□□ 0.97
NDEL1-217ENST00000583683 PPP1R12BO60237 982 aaPredicted RBP21.13■□□□□ 0.97
NDEL1-217ENST00000583683 SNHG28P0DPA3 235 aa21.13■□□□□ 0.97
NDEL1-217ENST00000583683 IFNAR1P17181 557 aa21.13■□□□□ 0.97
NDEL1-217ENST00000583683 KIF5BP33176 963 aa21.13■□□□□ 0.97
NDEL1-217ENST00000583683 NF2P35240 595 aa21.13■□□□□ 0.97
NDEL1-217ENST00000583683 ECE1P42892 770 aa21.13■□□□□ 0.97
NDEL1-217ENST00000583683 HMGN5P82970 282 aaKnown RBP21.13■□□□□ 0.97
NDEL1-217ENST00000583683 CCDC84Q86UT8 332 aaPredicted RBP21.13■□□□□ 0.97
NDEL1-217ENST00000583683 STAG2Q8N3U4 1231 aa21.13■□□□□ 0.97
NDEL1-217ENST00000583683 ACER1Q8TDN7 264 aa21.13■□□□□ 0.97
NDEL1-217ENST00000583683 ARHGEF10LQ9HCE6 1279 aa21.13■□□□□ 0.97
NDEL1-217ENST00000583683 SYNPO2Q9UMS6 1093 aa21.13■□□□□ 0.97
NDEL1-217ENST00000583683 MYH6P13533 1939 aa21.12■□□□□ 0.97
NDEL1-217ENST00000583683 PALM3A6NDB9 673 aaPredicted RBP21.12■□□□□ 0.97
NDEL1-217ENST00000583683 USP17L5A8MUK1 530 aa21.12■□□□□ 0.97
NDEL1-217ENST00000583683 CDKL5O76039 1030 aa21.12■□□□□ 0.97
NDEL1-217ENST00000583683 PLEKHA8P1O95397 391 aa21.12■□□□□ 0.97
NDEL1-217ENST00000583683 FDPSP14324 419 aaKnown RBP21.12■□□□□ 0.97
NDEL1-217ENST00000583683 FUT2Q10981 343 aa21.12■□□□□ 0.97
NDEL1-217ENST00000583683 USP17L2Q6R6M4 530 aa21.12■□□□□ 0.97
NDEL1-217ENST00000583683 TMTC3Q6ZXV5 915 aa21.12■□□□□ 0.97
NDEL1-217ENST00000583683 PHKBQ93100 1093 aa21.12■□□□□ 0.97
NDEL1-217ENST00000583683 TMX2Q9Y320 296 aa21.12■□□□□ 0.97
NDEL1-217ENST00000583683 PHIPQ8WWQ0 1821 aa21.12■□□□□ 0.97
NDEL1-217ENST00000583683 TRAF5O00463 557 aa21.11■□□□□ 0.97
NDEL1-217ENST00000583683 NBPF11Q86T75 865 aa21.11■□□□□ 0.97
NDEL1-217ENST00000583683 CCDC82Q8N4S0 544 aa21.11■□□□□ 0.97
NDEL1-217ENST00000583683 GMCL1P1Q8NEA9 526 aa21.11■□□□□ 0.97
NDEL1-217ENST00000583683 BAZ2BQ9UIF8 2168 aaKnown RBP21.11■□□□□ 0.97
NDEL1-217ENST00000583683 F5H6K3 240 aa21.11■□□□□ 0.97
NDEL1-217ENST00000583683 PARP1P09874 1014 aaKnown RBP21.11■□□□□ 0.97
NDEL1-217ENST00000583683 KLRC3Q07444 240 aa21.11■□□□□ 0.97
NDEL1-217ENST00000583683 NOL9Q5SY16 702 aaKnown RBP21.11■□□□□ 0.97
NDEL1-217ENST00000583683 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.11■□□□□ 0.97
NDEL1-217ENST00000583683 SRBD1Q8N5C6 995 aaKnown RBP21.11■□□□□ 0.97
NDEL1-217ENST00000583683 CIZ1Q9ULV3 898 aaPredicted RBP21.11■□□□□ 0.97
NDEL1-217ENST00000583683 GOLGA8HP0CJ92 632 aa21.1■□□□□ 0.97
NDEL1-217ENST00000583683 PICK1Q9NRD5 415 aa21.1■□□□□ 0.97
NDEL1-217ENST00000583683 FMNL1O95466 1100 aaPredicted RBP21.09■□□□□ 0.97
NDEL1-217ENST00000583683 PTPRAP18433 802 aa21.09■□□□□ 0.97
NDEL1-217ENST00000583683 GNAQP50148 359 aa21.09■□□□□ 0.97
NDEL1-217ENST00000583683 MAP3K9P80192 1104 aa21.09■□□□□ 0.97
NDEL1-217ENST00000583683 FMR1Q06787 632 aaKnown RBP eCLIP21.09■□□□□ 0.97
NDEL1-217ENST00000583683 PKP1Q13835 747 aa21.09■□□□□ 0.97
NDEL1-217ENST00000583683 CHMP5Q9NZZ3 219 aa21.09■□□□□ 0.97
NDEL1-217ENST00000583683 ORC3Q9UBD5 711 aaPredicted RBP21.09■□□□□ 0.97
NDEL1-217ENST00000583683 IREB2P48200 963 aaKnown RBP21.08■□□□□ 0.97
NDEL1-217ENST00000583683 ZNF543Q08ER8 600 aa21.08■□□□□ 0.97
NDEL1-217ENST00000583683 VGLL4Q14135 290 aa21.08■□□□□ 0.97
NDEL1-217ENST00000583683 MAP3K11Q16584 847 aa21.08■□□□□ 0.97
NDEL1-217ENST00000583683 ASPRV1Q53RT3 343 aa21.08■□□□□ 0.97
NDEL1-217ENST00000583683 SLFN13Q68D06 897 aa21.08■□□□□ 0.97
NDEL1-217ENST00000583683 FAM184AQ8NB25 1140 aa21.08■□□□□ 0.97
NDEL1-217ENST00000583683 SLC26A6Q9BXS9 759 aa21.08■□□□□ 0.97
NDEL1-217ENST00000583683 SH2D4AQ9H788 454 aa21.08■□□□□ 0.97
NDEL1-217ENST00000583683 FRMPD2Q68DX3 1309 aaPredicted RBP21.08■□□□□ 0.97
NDEL1-217ENST00000583683 CNTNAP5Q8WYK1 1306 aa21.08■□□□□ 0.97
NDEL1-217ENST00000583683 STK36Q9NRP7 1315 aa21.08■□□□□ 0.97
NDEL1-217ENST00000583683 KLRF2D3W0D1 207 aa21.08■□□□□ 0.96
NDEL1-217ENST00000583683 RAD21O60216 631 aa21.08■□□□□ 0.96
NDEL1-217ENST00000583683 NDUFB10O96000 172 aa21.08■□□□□ 0.96
NDEL1-217ENST00000583683 SYT1P21579 422 aa21.08■□□□□ 0.96
NDEL1-217ENST00000583683 SSRP1Q08945 709 aaKnown RBP21.08■□□□□ 0.96
NDEL1-217ENST00000583683 MOB2Q70IA6 237 aa21.08■□□□□ 0.96
NDEL1-217ENST00000583683 GMCL1Q96IK5 515 aa21.08■□□□□ 0.96
NDEL1-217ENST00000583683 RNF26Q9BY78 433 aaPredicted RBP21.08■□□□□ 0.96
NDEL1-217ENST00000583683 UBE2Q2LH0YL09 131 aa21.07■□□□□ 0.96
NDEL1-217ENST00000583683 SLC35G1Q2M3R5 365 aa21.07■□□□□ 0.96
NDEL1-217ENST00000583683 KIAA1755Q5JYT7 1200 aa21.07■□□□□ 0.96
NDEL1-217ENST00000583683 LARP1BQ659C4 914 aaKnown RBP21.07■□□□□ 0.96
NDEL1-217ENST00000583683 TRIM22Q8IYM9 498 aa21.07■□□□□ 0.96
NDEL1-217ENST00000583683 DCAF4Q8WV16 495 aa21.07■□□□□ 0.96
NDEL1-217ENST00000583683 LZTS2Q9BRK4 669 aa21.07■□□□□ 0.96
NDEL1-217ENST00000583683 GOPCQ9HD26 462 aa21.07■□□□□ 0.96
NDEL1-217ENST00000583683 SNCAIPQ9Y6H5 919 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms