RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 PPP2R3BQ9Y5P8 575 aa10□□□□□ -0.81
PPP4R1-225ENST00000583438 PTCH2Q9Y6C5 1203 aa10□□□□□ -0.81
PPP4R1-225ENST00000583438 SNCAIPQ9Y6H5 919 aa10□□□□□ -0.81
PPP4R1-225ENST00000583438 LAMA3Q16787 3333 aa9.99□□□□□ -0.81
PPP4R1-225ENST00000583438 FAM187AA6NFU0 413 aa9.99□□□□□ -0.81
PPP4R1-225ENST00000583438 FAM196BA6NMK8 535 aa9.99□□□□□ -0.81
PPP4R1-225ENST00000583438 TCP10L2B9ZVM9 353 aa9.99□□□□□ -0.81
PPP4R1-225ENST00000583438 GRM8O00222 908 aa9.99□□□□□ -0.81
PPP4R1-225ENST00000583438 GFRA3O60609 400 aa9.99□□□□□ -0.81
PPP4R1-225ENST00000583438 SLURP2P0DP57 97 aa9.99□□□□□ -0.81
PPP4R1-225ENST00000583438 IFIT5Q13325 482 aaKnown RBP9.99□□□□□ -0.81
PPP4R1-225ENST00000583438 DZIP1LQ8IYY4 767 aaKnown RBP9.99□□□□□ -0.81
PPP4R1-225ENST00000583438 SHISA4Q96DD7 197 aa9.99□□□□□ -0.81
PPP4R1-225ENST00000583438 DNAAF2Q9NVR5 837 aaKnown RBP9.99□□□□□ -0.81
PPP4R1-225ENST00000583438 TTF2Q9UNY4 1162 aaKnown RBP9.99□□□□□ -0.81
PPP4R1-225ENST00000583438 ADGRA2Q96PE1 1338 aa9.99□□□□□ -0.81
PPP4R1-225ENST00000583438 DKK1O94907 266 aa9.98□□□□□ -0.81
PPP4R1-225ENST00000583438 STAU1O95793 577 aaKnown RBP9.98□□□□□ -0.81
PPP4R1-225ENST00000583438 CRKP46108 304 aa9.98□□□□□ -0.81
PPP4R1-225ENST00000583438 ATP1A2P50993 1020 aa9.98□□□□□ -0.81
PPP4R1-225ENST00000583438 MOGSQ13724 837 aa9.98□□□□□ -0.81
PPP4R1-225ENST00000583438 LDHAL6AQ6ZMR3 332 aa9.98□□□□□ -0.81
PPP4R1-225ENST00000583438 ZNF804AQ7Z570 1209 aa9.98□□□□□ -0.81
PPP4R1-225ENST00000583438 MYH16Q9H6N6 1097 aa9.98□□□□□ -0.81
PPP4R1-225ENST00000583438 ZMIZ1Q9ULJ6 1067 aa9.98□□□□□ -0.81
PPP4R1-225ENST00000583438 LOC285556D6RIA3 1793 aa9.97□□□□□ -0.81
PPP4R1-225ENST00000583438 PPP1R12BO60237 982 aaPredicted RBP9.97□□□□□ -0.81
PPP4R1-225ENST00000583438 SP3Q02447 781 aa9.97□□□□□ -0.81
PPP4R1-225ENST00000583438 Q6ZVU0 165 aa9.97□□□□□ -0.81
PPP4R1-225ENST00000583438 FBXO33Q7Z6M2 555 aa9.97□□□□□ -0.81
PPP4R1-225ENST00000583438 ANKRD13AQ8IZ07 590 aa9.97□□□□□ -0.81
PPP4R1-225ENST00000583438 KDF1Q8NAX2 398 aaPredicted RBP9.97□□□□□ -0.81
PPP4R1-225ENST00000583438 RETREG2Q8NC44 543 aa9.97□□□□□ -0.81
PPP4R1-225ENST00000583438 SH3TC2Q8TF17 1288 aa9.97□□□□□ -0.81
PPP4R1-225ENST00000583438 ZKSCAN4Q969J2 545 aaPredicted RBP9.97□□□□□ -0.81
PPP4R1-225ENST00000583438 BICC1Q9H694 974 aaKnown RBP9.97□□□□□ -0.81
PPP4R1-225ENST00000583438 EFCC1Q9HA90 598 aa9.97□□□□□ -0.81
PPP4R1-225ENST00000583438 UTYO14607 1347 aa9.97□□□□□ -0.81
PPP4R1-225ENST00000583438 COL6A3P12111 3177 aa9.96□□□□□ -0.81
PPP4R1-225ENST00000583438 CCL15-CCL14A0A0B4J2E2 113 aa9.96□□□□□ -0.82
PPP4R1-225ENST00000583438 BTBD19C9JJ37 291 aa9.96□□□□□ -0.82
PPP4R1-225ENST00000583438 NRG2O14511 850 aaPredicted RBP9.96□□□□□ -0.82
PPP4R1-225ENST00000583438 MMP14P50281 582 aa9.96□□□□□ -0.82
PPP4R1-225ENST00000583438 RBM5P52756 815 aaKnown RBP eCLIP9.96□□□□□ -0.82
PPP4R1-225ENST00000583438 INHBEP58166 350 aa9.96□□□□□ -0.82
PPP4R1-225ENST00000583438 ELOAQ14241 798 aaKnown RBP9.96□□□□□ -0.82
PPP4R1-225ENST00000583438 MTFR1Q15390 333 aa9.96□□□□□ -0.82
PPP4R1-225ENST00000583438 CCL15Q16663 113 aa9.96□□□□□ -0.82
PPP4R1-225ENST00000583438 RABL6Q3YEC7 729 aaPredicted RBP9.96□□□□□ -0.82
PPP4R1-225ENST00000583438 APOBEC3HQ6NTF7 200 aaKnown RBP9.96□□□□□ -0.82
PPP4R1-225ENST00000583438 ERO1AQ96HE7 468 aa9.96□□□□□ -0.82
PPP4R1-225ENST00000583438 CNNM1Q9NRU3 951 aa9.96□□□□□ -0.82
PPP4R1-225ENST00000583438 NOVA2Q9UNW9 492 aaKnown RBP9.96□□□□□ -0.82
PPP4R1-225ENST00000583438 ZNF521Q96K83 1311 aa9.96□□□□□ -0.82
PPP4R1-225ENST00000583438 ATRNL1Q5VV63 1379 aa9.96□□□□□ -0.82
PPP4R1-225ENST00000583438 AVPP01185 164 aa9.95□□□□□ -0.82
PPP4R1-225ENST00000583438 FGFR2P21802 821 aa9.95□□□□□ -0.82
PPP4R1-225ENST00000583438 HIBADHP31937 336 aaKnown RBP9.95□□□□□ -0.82
PPP4R1-225ENST00000583438 INPP5BP32019 993 aa9.95□□□□□ -0.82
PPP4R1-225ENST00000583438 IREB2P48200 963 aaKnown RBP9.95□□□□□ -0.82
PPP4R1-225ENST00000583438 RFX5P48382 616 aaPredicted RBP9.95□□□□□ -0.82
PPP4R1-225ENST00000583438 CHAF1AQ13111 956 aaPredicted RBP9.95□□□□□ -0.82
PPP4R1-225ENST00000583438 UBE4AQ14139 1066 aa9.95□□□□□ -0.82
PPP4R1-225ENST00000583438 SUPT20HL1Q3ZLR7 823 aa9.95□□□□□ -0.82
PPP4R1-225ENST00000583438 CCDC102BQ68D86 513 aa9.95□□□□□ -0.82
PPP4R1-225ENST00000583438 ANKMY2Q8IV38 441 aa9.95□□□□□ -0.82
PPP4R1-225ENST00000583438 ZFPM1Q8IX07 1006 aa9.95□□□□□ -0.82
PPP4R1-225ENST00000583438 HOMEZQ8IX15 550 aa9.95□□□□□ -0.82
PPP4R1-225ENST00000583438 STK32AQ8WU08 396 aa9.95□□□□□ -0.82
PPP4R1-225ENST00000583438 AGBL1Q96MI9 1066 aa9.95□□□□□ -0.82
PPP4R1-225ENST00000583438 RFX7Q2KHR2 1363 aa9.95□□□□□ -0.82
PPP4R1-225ENST00000583438 FRMPD3Q5JV73 1810 aa9.95□□□□□ -0.82
PPP4R1-225ENST00000583438 FOCADQ5VW36 1801 aa9.95□□□□□ -0.82
PPP4R1-225ENST00000583438 UNCXA6NJT0 531 aa9.94□□□□□ -0.82
PPP4R1-225ENST00000583438 H0YGN5 161 aa9.94□□□□□ -0.82
PPP4R1-225ENST00000583438 ADH1AP07327 375 aa9.94□□□□□ -0.82
PPP4R1-225ENST00000583438 NFIAQ12857 509 aa9.94□□□□□ -0.82
PPP4R1-225ENST00000583438 DPYDQ12882 1025 aa9.94□□□□□ -0.82
PPP4R1-225ENST00000583438 TAF1CQ15572 869 aaPredicted RBP9.94□□□□□ -0.82
PPP4R1-225ENST00000583438 CCDC57Q2TAC2 916 aa9.94□□□□□ -0.82
PPP4R1-225ENST00000583438 SLC4A10Q6U841 1118 aa9.94□□□□□ -0.82
PPP4R1-225ENST00000583438 CYP2U1Q7Z449 544 aa9.94□□□□□ -0.82
PPP4R1-225ENST00000583438 WDR63Q8IWG1 891 aa9.94□□□□□ -0.82
PPP4R1-225ENST00000583438 SIX5Q8N196 739 aa9.94□□□□□ -0.82
PPP4R1-225ENST00000583438 TPCN2Q8NHX9 752 aa9.94□□□□□ -0.82
PPP4R1-225ENST00000583438 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.94□□□□□ -0.82
PPP4R1-225ENST00000583438 RPAP1Q9BWH6 1393 aaPredicted RBP9.93□□□□□ -0.82
PPP4R1-225ENST00000583438 CARNS1A5YM72 827 aa9.93□□□□□ -0.82
PPP4R1-225ENST00000583438 TMEM229AB2RXF0 380 aa9.93□□□□□ -0.82
PPP4R1-225ENST00000583438 CAPN5O15484 640 aaPredicted RBP9.93□□□□□ -0.82
PPP4R1-225ENST00000583438 MYO1BO43795 1136 aa9.93□□□□□ -0.82
PPP4R1-225ENST00000583438 LACTBP83111 547 aaPredicted RBP9.93□□□□□ -0.82
PPP4R1-225ENST00000583438 UBE2Q1Q7Z7E8 422 aa9.93□□□□□ -0.82
PPP4R1-225ENST00000583438 TRIM47Q96LD4 638 aa9.93□□□□□ -0.82
PPP4R1-225ENST00000583438 ZDHHC15Q96MV8 337 aa9.93□□□□□ -0.82
PPP4R1-225ENST00000583438 WRNIP1Q96S55 665 aa9.93□□□□□ -0.82
PPP4R1-225ENST00000583438 MRS2Q9HD23 443 aa9.93□□□□□ -0.82
PPP4R1-225ENST00000583438 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.93□□□□□ -0.82
PPP4R1-225ENST00000583438 SFI1A8K8P3 1242 aa9.92□□□□□ -0.82
PPP4R1-225ENST00000583438 TLR2O60603 784 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms