RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 NFXL1Q6ZNB6 911 aa19.16■□□□□ 0.66
CDK5RAP3-228ENST00000583363 NOL8Q76FK4 1167 aaKnown RBP19.16■□□□□ 0.66
CDK5RAP3-228ENST00000583363 HSCBQ8IWL3 235 aa19.16■□□□□ 0.66
CDK5RAP3-228ENST00000583363 ZKSCAN4Q969J2 545 aaPredicted RBP19.16■□□□□ 0.66
CDK5RAP3-228ENST00000583363 MKL1Q969V6 931 aa19.16■□□□□ 0.66
CDK5RAP3-228ENST00000583363 ZNF274Q96GC6 653 aaPredicted RBP19.16■□□□□ 0.66
CDK5RAP3-228ENST00000583363 CLIP2Q9UDT6 1046 aa19.16■□□□□ 0.66
CDK5RAP3-228ENST00000583363 STX8Q9UNK0 236 aa19.16■□□□□ 0.66
CDK5RAP3-228ENST00000583363 TOP1P11387 765 aaKnown RBP19.15■□□□□ 0.66
CDK5RAP3-228ENST00000583363 EEF2P13639 858 aaKnown RBP19.15■□□□□ 0.66
CDK5RAP3-228ENST00000583363 PDIA3P30101 505 aaKnown RBP19.15■□□□□ 0.66
CDK5RAP3-228ENST00000583363 ME3Q16798 604 aa19.15■□□□□ 0.66
CDK5RAP3-228ENST00000583363 NOL9Q5SY16 702 aaKnown RBP19.15■□□□□ 0.66
CDK5RAP3-228ENST00000583363 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.15■□□□□ 0.66
CDK5RAP3-228ENST00000583363 ARMC9Q7Z3E5 817 aa19.15■□□□□ 0.66
CDK5RAP3-228ENST00000583363 SCYL3Q8IZE3 742 aa19.15■□□□□ 0.66
CDK5RAP3-228ENST00000583363 SLC12A7Q9Y666 1083 aa19.15■□□□□ 0.66
CDK5RAP3-228ENST00000583363 GREB1LQ9C091 1923 aaPredicted RBP19.14■□□□□ 0.65
CDK5RAP3-228ENST00000583363 KLF18A0A0U1RQI7 1052 aa19.14■□□□□ 0.65
CDK5RAP3-228ENST00000583363 K7ELQ4 463 aaPredicted RBP19.14■□□□□ 0.65
CDK5RAP3-228ENST00000583363 BECN1Q14457 450 aa19.14■□□□□ 0.65
CDK5RAP3-228ENST00000583363 MOB2Q70IA6 237 aa19.14■□□□□ 0.65
CDK5RAP3-228ENST00000583363 CLEC10AQ8IUN9 316 aa19.14■□□□□ 0.65
CDK5RAP3-228ENST00000583363 TMX3Q96JJ7 454 aa19.14■□□□□ 0.65
CDK5RAP3-228ENST00000583363 KAT14Q9H8E8 782 aa19.14■□□□□ 0.65
CDK5RAP3-228ENST00000583363 SH2B1Q9NRF2 756 aaPredicted RBP19.14■□□□□ 0.65
CDK5RAP3-228ENST00000583363 ICA1Q05084 483 aa19.13■□□□□ 0.65
CDK5RAP3-228ENST00000583363 TTLL12Q14166 644 aaPredicted RBP19.13■□□□□ 0.65
CDK5RAP3-228ENST00000583363 APOA5Q6Q788 366 aa19.13■□□□□ 0.65
CDK5RAP3-228ENST00000583363 SYNE3Q6ZMZ3 975 aa19.13■□□□□ 0.65
CDK5RAP3-228ENST00000583363 CATIPQ7Z7H3 387 aa19.13■□□□□ 0.65
CDK5RAP3-228ENST00000583363 RASAL3Q86YV0 1011 aa19.13■□□□□ 0.65
CDK5RAP3-228ENST00000583363 ZNF654Q8IZM8 581 aa19.13■□□□□ 0.65
CDK5RAP3-228ENST00000583363 PAPPA2Q9BXP8 1791 aa19.13■□□□□ 0.65
CDK5RAP3-228ENST00000583363 UNCXA6NJT0 531 aa19.12■□□□□ 0.65
CDK5RAP3-228ENST00000583363 USP17L5A8MUK1 530 aa19.12■□□□□ 0.65
CDK5RAP3-228ENST00000583363 PFKFB2O60825 505 aa19.12■□□□□ 0.65
CDK5RAP3-228ENST00000583363 LARGE1O95461 756 aa19.12■□□□□ 0.65
CDK5RAP3-228ENST00000583363 PTPRAP18433 802 aa19.12■□□□□ 0.65
CDK5RAP3-228ENST00000583363 FKBP1BP68106 108 aa19.12■□□□□ 0.65
CDK5RAP3-228ENST00000583363 ATP2B2Q01814 1243 aa19.12■□□□□ 0.65
CDK5RAP3-228ENST00000583363 TROAPQ12815 778 aa19.12■□□□□ 0.65
CDK5RAP3-228ENST00000583363 LDLRAD1Q5T700 205 aa19.12■□□□□ 0.65
CDK5RAP3-228ENST00000583363 ANKRD13AQ8IZ07 590 aa19.12■□□□□ 0.65
CDK5RAP3-228ENST00000583363 PNMA1Q8ND90 353 aa19.12■□□□□ 0.65
CDK5RAP3-228ENST00000583363 PICK1Q9NRD5 415 aa19.12■□□□□ 0.65
CDK5RAP3-228ENST00000583363 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.12■□□□□ 0.65
CDK5RAP3-228ENST00000583363 HPS5Q9UPZ3 1129 aa19.12■□□□□ 0.65
CDK5RAP3-228ENST00000583363 PDE4DIPQ5VU43 2346 aa19.11■□□□□ 0.65
CDK5RAP3-228ENST00000583363 A0A1W2PRG0 241 aa19.11■□□□□ 0.65
CDK5RAP3-228ENST00000583363 UBE2Q2LH0YL09 131 aa19.11■□□□□ 0.65
CDK5RAP3-228ENST00000583363 ZBTB43O43298 467 aa19.11■□□□□ 0.65
CDK5RAP3-228ENST00000583363 RCAN1P53805 252 aa19.11■□□□□ 0.65
CDK5RAP3-228ENST00000583363 SOX10P56693 466 aa19.11■□□□□ 0.65
CDK5RAP3-228ENST00000583363 VGLL4Q14135 290 aa19.11■□□□□ 0.65
CDK5RAP3-228ENST00000583363 ACER1Q8TDN7 264 aa19.11■□□□□ 0.65
CDK5RAP3-228ENST00000583363 WDR18Q9BV38 432 aa19.11■□□□□ 0.65
CDK5RAP3-228ENST00000583363 SLKQ9H2G2 1235 aaPredicted RBP19.11■□□□□ 0.65
CDK5RAP3-228ENST00000583363 ARHGEF10LQ9HCE6 1279 aa19.11■□□□□ 0.65
CDK5RAP3-228ENST00000583363 NAP1L2Q9ULW6 460 aaPredicted RBP19.11■□□□□ 0.65
CDK5RAP3-228ENST00000583363 SYNPO2Q9UMS6 1093 aa19.11■□□□□ 0.65
CDK5RAP3-228ENST00000583363 CSADQ9Y600 493 aa19.11■□□□□ 0.65
CDK5RAP3-228ENST00000583363 SNCAIPQ9Y6H5 919 aa19.11■□□□□ 0.65
CDK5RAP3-228ENST00000583363 DDAH1O94760 285 aa19.1■□□□□ 0.65
CDK5RAP3-228ENST00000583363 CALM1P0DP23 149 aa19.1■□□□□ 0.65
CDK5RAP3-228ENST00000583363 CALM2P0DP24 149 aa19.1■□□□□ 0.65
CDK5RAP3-228ENST00000583363 CALM3P0DP25 149 aa19.1■□□□□ 0.65
CDK5RAP3-228ENST00000583363 STK3Q13188 491 aa19.1■□□□□ 0.65
CDK5RAP3-228ENST00000583363 CUL4AQ13619 759 aa19.1■□□□□ 0.65
CDK5RAP3-228ENST00000583363 CCDC84Q86UT8 332 aaPredicted RBP19.1■□□□□ 0.65
CDK5RAP3-228ENST00000583363 RAB11FIP4Q86YS3 637 aa19.1■□□□□ 0.65
CDK5RAP3-228ENST00000583363 NECAB1Q8N987 351 aa19.1■□□□□ 0.65
CDK5RAP3-228ENST00000583363 NUP133Q8WUM0 1156 aa19.1■□□□□ 0.65
CDK5RAP3-228ENST00000583363 MAP3K14Q99558 947 aa19.1■□□□□ 0.65
CDK5RAP3-228ENST00000583363 MYL10Q9BUA6 226 aa19.1■□□□□ 0.65
CDK5RAP3-228ENST00000583363 TMX2Q9Y320 296 aa19.1■□□□□ 0.65
CDK5RAP3-228ENST00000583363 GOLGA8BA8MQT2 603 aa19.09■□□□□ 0.65
CDK5RAP3-228ENST00000583363 CCT2P78371 535 aaKnown RBP19.09■□□□□ 0.65
CDK5RAP3-228ENST00000583363 SCRN1Q12765 414 aa19.09■□□□□ 0.65
CDK5RAP3-228ENST00000583363 LRRC47Q8N1G4 583 aaKnown RBP19.09■□□□□ 0.65
CDK5RAP3-228ENST00000583363 FANCBQ8NB91 859 aa19.09■□□□□ 0.65
CDK5RAP3-228ENST00000583363 AS3MTQ9HBK9 375 aa19.09■□□□□ 0.65
CDK5RAP3-228ENST00000583363 FAM217BQ9NTX9 383 aaPredicted RBP19.09■□□□□ 0.65
CDK5RAP3-228ENST00000583363 ZHX2Q9Y6X8 837 aa19.09■□□□□ 0.65
CDK5RAP3-228ENST00000583363 RXRAP19793 462 aa19.08■□□□□ 0.64
CDK5RAP3-228ENST00000583363 METAP2P50579 478 aaKnown RBP eCLIP19.08■□□□□ 0.64
CDK5RAP3-228ENST00000583363 ST3GAL1Q11201 340 aa19.08■□□□□ 0.64
CDK5RAP3-228ENST00000583363 PPP2R5BQ15173 497 aa19.08■□□□□ 0.64
CDK5RAP3-228ENST00000583363 CTU1Q7Z7A3 348 aaKnown RBP19.08■□□□□ 0.64
CDK5RAP3-228ENST00000583363 MICU3Q86XE3 530 aa19.08■□□□□ 0.64
CDK5RAP3-228ENST00000583363 REM2Q8IYK8 340 aaPredicted RBP19.08■□□□□ 0.64
CDK5RAP3-228ENST00000583363 GMCL1P1Q8NEA9 526 aa19.08■□□□□ 0.64
CDK5RAP3-228ENST00000583363 GTF3C6Q969F1 213 aa19.08■□□□□ 0.64
CDK5RAP3-228ENST00000583363 CLMNQ96JQ2 1002 aa19.08■□□□□ 0.64
CDK5RAP3-228ENST00000583363 AFG3L2Q9Y4W6 797 aa19.08■□□□□ 0.64
CDK5RAP3-228ENST00000583363 GOLGA8AA7E2F4 631 aa19.07■□□□□ 0.64
CDK5RAP3-228ENST00000583363 F5H6K3 240 aa19.07■□□□□ 0.64
CDK5RAP3-228ENST00000583363 SNHG28P0DPA3 235 aa19.07■□□□□ 0.64
CDK5RAP3-228ENST00000583363 CDC27P30260 824 aa19.07■□□□□ 0.64
CDK5RAP3-228ENST00000583363 ADD1P35611 737 aaKnown RBP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms