RNA–Protein interactions for RNA: ENST00000583311.1

MIR3960-201, Transcript of microRNA 3960, humanhuman

BASIC

Gene MIR3960, Length 91 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR3960-201ENST00000583311 B4E1Z4 1266 aa28.86■■■□□ 2.21
MIR3960-201ENST00000583311 USP17L15C9J2P7 530 aa28.86■■■□□ 2.21
MIR3960-201ENST00000583311 USP17L13C9JLJ4 530 aa28.86■■■□□ 2.21
MIR3960-201ENST00000583311 USP17L11C9JVI0 530 aa28.86■■■□□ 2.21
MIR3960-201ENST00000583311 USP17L18D6R9N7 530 aa28.86■■■□□ 2.21
MIR3960-201ENST00000583311 USP17L22D6RA61 530 aa28.86■■■□□ 2.21
MIR3960-201ENST00000583311 USP17L17D6RBQ6 530 aa28.86■■■□□ 2.21
MIR3960-201ENST00000583311 USP17L19D6RCP7 530 aa28.86■■■□□ 2.21
MIR3960-201ENST00000583311 USP17L20D6RJB6 530 aa28.86■■■□□ 2.21
MIR3960-201ENST00000583311 TLR2O60603 784 aa28.86■■■□□ 2.21
MIR3960-201ENST00000583311 VCAM1P19320 739 aa28.86■■■□□ 2.21
MIR3960-201ENST00000583311 USP17L24Q0WX57 530 aa28.86■■■□□ 2.21
MIR3960-201ENST00000583311 NECTIN1Q15223 517 aa28.86■■■□□ 2.21
MIR3960-201ENST00000583311 RALYLQ86SE5 291 aaKnown RBP28.86■■■□□ 2.21
MIR3960-201ENST00000583311 E7EWF7 191 aa28.85■■■□□ 2.21
MIR3960-201ENST00000583311 EPB41L2O43491 1005 aaKnown RBP28.85■■■□□ 2.21
MIR3960-201ENST00000583311 KDM4AO75164 1064 aa28.85■■■□□ 2.21
MIR3960-201ENST00000583311 LBX1P52954 281 aa28.85■■■□□ 2.21
MIR3960-201ENST00000583311 CREB3L3Q68CJ9 461 aa28.85■■■□□ 2.21
MIR3960-201ENST00000583311 SMCR8Q8TEV9 937 aaPredicted RBP28.85■■■□□ 2.21
MIR3960-201ENST00000583311 IL17RBQ9NRM6 502 aa28.85■■■□□ 2.21
MIR3960-201ENST00000583311 GPR25O00155 361 aa28.84■■■□□ 2.21
MIR3960-201ENST00000583311 SLC27A2O14975 620 aa28.84■■■□□ 2.21
MIR3960-201ENST00000583311 WDR46O15213 610 aaKnown RBP28.84■■■□□ 2.21
MIR3960-201ENST00000583311 NCOA7Q8NI08 942 aa28.84■■■□□ 2.21
MIR3960-201ENST00000583311 ASCC2Q9H1I8 757 aaPredicted RBP28.84■■■□□ 2.21
MIR3960-201ENST00000583311 RAD21O60216 631 aa28.83■■■□□ 2.21
MIR3960-201ENST00000583311 CYP2C8P10632 490 aa28.83■■■□□ 2.21
MIR3960-201ENST00000583311 TTC14Q96N46 770 aa28.83■■■□□ 2.21
MIR3960-201ENST00000583311 RPAP3Q9H6T3 665 aaPredicted RBP28.83■■■□□ 2.21
MIR3960-201ENST00000583311 PRDM10Q9NQV6 1147 aa28.83■■■□□ 2.21
MIR3960-201ENST00000583311 ZSWIM5Q9P217 1185 aa28.83■■■□□ 2.21
MIR3960-201ENST00000583311 F5H6K3 240 aa28.82■■■□□ 2.2
MIR3960-201ENST00000583311 NMT2O60551 498 aa28.82■■■□□ 2.2
MIR3960-201ENST00000583311 NOVP48745 357 aa28.82■■■□□ 2.2
MIR3960-201ENST00000583311 KLRC3Q07444 240 aa28.82■■■□□ 2.2
MIR3960-201ENST00000583311 CATSPERGQ6ZRH7 1159 aa28.82■■■□□ 2.2
MIR3960-201ENST00000583311 GMCL1P1Q8NEA9 526 aa28.82■■■□□ 2.2
MIR3960-201ENST00000583311 GTF3C2Q8WUA4 911 aaPredicted RBP28.82■■■□□ 2.2
MIR3960-201ENST00000583311 R3HDMLQ9H3Y0 253 aa28.82■■■□□ 2.2
MIR3960-201ENST00000583311 MYH4Q9Y623 1939 aa28.82■■■□□ 2.2
MIR3960-201ENST00000583311 ZKSCAN1P17029 563 aaPredicted RBP28.81■■■□□ 2.2
MIR3960-201ENST00000583311 GCLCP48506 637 aaPredicted RBP28.81■■■□□ 2.2
MIR3960-201ENST00000583311 SPICE1Q8N0Z3 855 aa28.81■■■□□ 2.2
MIR3960-201ENST00000583311 UBAC1Q9BSL1 405 aa28.81■■■□□ 2.2
MIR3960-201ENST00000583311 TANGO6Q9C0B7 1094 aa28.81■■■□□ 2.2
MIR3960-201ENST00000583311 FKTNO75072 461 aa28.8■■■□□ 2.2
MIR3960-201ENST00000583311 TOP1P11387 765 aaKnown RBP28.8■■■□□ 2.2
MIR3960-201ENST00000583311 DGKHQ86XP1 1220 aa28.8■■■□□ 2.2
MIR3960-201ENST00000583311 LRRC47Q8N1G4 583 aaKnown RBP28.8■■■□□ 2.2
MIR3960-201ENST00000583311 ZSCAN10Q96SZ4 725 aaPredicted RBP28.8■■■□□ 2.2
MIR3960-201ENST00000583311 ADGRA2Q96PE1 1338 aa28.79■■■□□ 2.2
MIR3960-201ENST00000583311 SP3Q02447 781 aa28.79■■■□□ 2.2
MIR3960-201ENST00000583311 KIAA1755Q5JYT7 1200 aa28.79■■■□□ 2.2
MIR3960-201ENST00000583311 C17orf99Q6UX52 265 aa28.79■■■□□ 2.2
MIR3960-201ENST00000583311 NDUFB10O96000 172 aa28.78■■■□□ 2.2
MIR3960-201ENST00000583311 KRT32Q14532 448 aa28.78■■■□□ 2.2
MIR3960-201ENST00000583311 SART3Q15020 963 aaKnown RBP28.78■■■□□ 2.2
MIR3960-201ENST00000583311 ZNF296Q8WUU4 475 aaPredicted RBP28.78■■■□□ 2.2
MIR3960-201ENST00000583311 ZKSCAN3Q9BRR0 538 aa28.78■■■□□ 2.2
MIR3960-201ENST00000583311 CPA4Q9UI42 421 aa28.78■■■□□ 2.2
MIR3960-201ENST00000583311 HERVK_113P62684 666 aa28.77■■■□□ 2.2
MIR3960-201ENST00000583311 SLFN13Q68D06 897 aa28.77■■■□□ 2.2
MIR3960-201ENST00000583311 STOX1Q6ZVD7 989 aa28.77■■■□□ 2.2
MIR3960-201ENST00000583311 P2RX7Q99572 595 aaKnown RBP28.77■■■□□ 2.2
MIR3960-201ENST00000583311 TAF6LQ9Y6J9 622 aa28.77■■■□□ 2.2
MIR3960-201ENST00000583311 TNKSO95271 1327 aa28.76■■■□□ 2.19
MIR3960-201ENST00000583311 ERICH2A1L162 156 aa28.76■■■□□ 2.19
MIR3960-201ENST00000583311 MCCP23508 829 aa28.76■■■□□ 2.19
MIR3960-201ENST00000583311 HSPA4P34932 840 aa28.76■■■□□ 2.19
MIR3960-201ENST00000583311 COG2Q14746 738 aa28.76■■■□□ 2.19
MIR3960-201ENST00000583311 TSGA10IPQ3SY00 556 aa28.76■■■□□ 2.19
MIR3960-201ENST00000583311 NKX2-3Q8TAU0 364 aa28.76■■■□□ 2.19
MIR3960-201ENST00000583311 ERO1AQ96HE7 468 aa28.76■■■□□ 2.19
MIR3960-201ENST00000583311 TMEM47Q9BQJ4 181 aa28.76■■■□□ 2.19
MIR3960-201ENST00000583311 HOXC10Q9NYD6 342 aa28.76■■■□□ 2.19
MIR3960-201ENST00000583311 MYPNQ86TC9 1320 aa28.75■■■□□ 2.19
MIR3960-201ENST00000583311 KIF22Q14807 665 aa28.75■■■□□ 2.19
MIR3960-201ENST00000583311 ARHGEF6Q15052 776 aa28.75■■■□□ 2.19
MIR3960-201ENST00000583311 FAM83BQ5T0W9 1011 aa28.75■■■□□ 2.19
MIR3960-201ENST00000583311 ANKS1AQ92625 1134 aa28.75■■■□□ 2.19
MIR3960-201ENST00000583311 GMCL1Q96IK5 515 aa28.75■■■□□ 2.19
MIR3960-201ENST00000583311 FLOT1O75955 427 aa28.74■■■□□ 2.19
MIR3960-201ENST00000583311 BCRP11274 1271 aa28.74■■■□□ 2.19
MIR3960-201ENST00000583311 MCM5P33992 734 aa28.74■■■□□ 2.19
MIR3960-201ENST00000583311 SLC1A4P43007 532 aa28.74■■■□□ 2.19
MIR3960-201ENST00000583311 FAM110CQ1W6H9 321 aa28.74■■■□□ 2.19
MIR3960-201ENST00000583311 RCSD1Q6JBY9 416 aa28.74■■■□□ 2.19
MIR3960-201ENST00000583311 CYB5R4Q7L1T6 521 aa28.74■■■□□ 2.19
MIR3960-201ENST00000583311 MB21D2Q8IYB1 491 aaPredicted RBP28.74■■■□□ 2.19
MIR3960-201ENST00000583311 ANKRD13CQ8N6S4 541 aa28.74■■■□□ 2.19
MIR3960-201ENST00000583311 ENAHQ8N8S7 591 aaPredicted RBP28.74■■■□□ 2.19
MIR3960-201ENST00000583311 MTA3Q9BTC8 594 aa28.74■■■□□ 2.19
MIR3960-201ENST00000583311 KAT14Q9H8E8 782 aa28.74■■■□□ 2.19
MIR3960-201ENST00000583311 BMP3P12645 472 aa28.73■■■□□ 2.19
MIR3960-201ENST00000583311 IFIT1BQ5T764 474 aaKnown RBP28.73■■■□□ 2.19
MIR3960-201ENST00000583311 LBX2Q6XYB7 198 aa28.73■■■□□ 2.19
MIR3960-201ENST00000583311 DCAF4Q8WV16 495 aa28.73■■■□□ 2.19
MIR3960-201ENST00000583311 IFIT3O14879 490 aaKnown RBP28.72■■■□□ 2.19
MIR3960-201ENST00000583311 KCNB2Q92953 911 aa28.72■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms