RNA–Protein interactions for RNA: ENST00000583277.1

SENP3-208, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 1,578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-208ENST00000583277 ATP2B2Q01814 1243 aa17.02■□□□□ 0.32
SENP3-208ENST00000583277 SSRP1Q08945 709 aaKnown RBP17.02■□□□□ 0.32
SENP3-208ENST00000583277 KRT26Q7Z3Y9 468 aa17.02■□□□□ 0.32
SENP3-208ENST00000583277 LRRC47Q8N1G4 583 aaKnown RBP17.02■□□□□ 0.32
SENP3-208ENST00000583277 RGS22Q8NE09 1264 aa17.02■□□□□ 0.32
SENP3-208ENST00000583277 WASF1Q92558 559 aa17.02■□□□□ 0.32
SENP3-208ENST00000583277 ARHGEF10LQ9HCE6 1279 aa17.02■□□□□ 0.32
SENP3-208ENST00000583277 SSC5DA1L4H1 1573 aa17.02■□□□□ 0.32
SENP3-208ENST00000583277 CTNND1O60716 968 aaKnown RBP17.02■□□□□ 0.31
SENP3-208ENST00000583277 BRD1O95696 1058 aa17.02■□□□□ 0.31
SENP3-208ENST00000583277 PARP1P09874 1014 aaKnown RBP17.02■□□□□ 0.31
SENP3-208ENST00000583277 SHROOM1Q2M3G4 852 aaPredicted RBP17.02■□□□□ 0.31
SENP3-208ENST00000583277 ASPRV1Q53RT3 343 aa17.02■□□□□ 0.31
SENP3-208ENST00000583277 RNF26Q9BY78 433 aaPredicted RBP17.02■□□□□ 0.31
SENP3-208ENST00000583277 SH2D4AQ9H788 454 aa17.02■□□□□ 0.31
SENP3-208ENST00000583277 RBM27Q9P2N5 1060 aaKnown RBP17.02■□□□□ 0.31
SENP3-208ENST00000583277 POTECB2RU33 542 aa17.01■□□□□ 0.31
SENP3-208ENST00000583277 SNHG28P0DPA3 235 aa17.01■□□□□ 0.31
SENP3-208ENST00000583277 PDHBP11177 359 aa17.01■□□□□ 0.31
SENP3-208ENST00000583277 AKAP17AQ02040 695 aaKnown RBP17.01■□□□□ 0.31
SENP3-208ENST00000583277 PKP1Q13835 747 aa17.01■□□□□ 0.31
SENP3-208ENST00000583277 EAPPQ56P03 285 aaPredicted RBP17.01■□□□□ 0.31
SENP3-208ENST00000583277 USP48Q86UV5 1035 aa17.01■□□□□ 0.31
SENP3-208ENST00000583277 PHKBQ93100 1093 aa17.01■□□□□ 0.31
SENP3-208ENST00000583277 SLC26A6Q9BXS9 759 aa17.01■□□□□ 0.31
SENP3-208ENST00000583277 MAD2L2Q9UI95 211 aa17.01■□□□□ 0.31
SENP3-208ENST00000583277 ZNF112Q9UJU3 913 aa17.01■□□□□ 0.31
SENP3-208ENST00000583277 PALM3A6NDB9 673 aaPredicted RBP17■□□□□ 0.31
SENP3-208ENST00000583277 PLEKHA8P1O95397 391 aa17■□□□□ 0.31
SENP3-208ENST00000583277 DEXIO95424 95 aa17■□□□□ 0.31
SENP3-208ENST00000583277 FDPSP14324 419 aaKnown RBP17■□□□□ 0.31
SENP3-208ENST00000583277 JAG1P78504 1218 aa17■□□□□ 0.31
SENP3-208ENST00000583277 NBPF11Q86T75 865 aa17■□□□□ 0.31
SENP3-208ENST00000583277 GMCL1P1Q8NEA9 526 aa17■□□□□ 0.31
SENP3-208ENST00000583277 CNTNAP5Q8WYK1 1306 aa17■□□□□ 0.31
SENP3-208ENST00000583277 VPS37CA5D8V6 355 aaPredicted RBP16.99■□□□□ 0.31
SENP3-208ENST00000583277 ADM5C9JUS6 153 aa16.99■□□□□ 0.31
SENP3-208ENST00000583277 H3BQV1 296 aa16.99■□□□□ 0.31
SENP3-208ENST00000583277 VEGFAP15692 232 aaPredicted RBP16.99■□□□□ 0.31
SENP3-208ENST00000583277 SMARCA1P28370 1054 aa16.99■□□□□ 0.31
SENP3-208ENST00000583277 NF2P35240 595 aa16.99■□□□□ 0.31
SENP3-208ENST00000583277 FUT2Q10981 343 aa16.99■□□□□ 0.31
SENP3-208ENST00000583277 GPATCH4Q5T3I0 446 aaKnown RBP16.99■□□□□ 0.31
SENP3-208ENST00000583277 IFFO2Q5TF58 517 aa16.99■□□□□ 0.31
SENP3-208ENST00000583277 DCAF4Q8WV16 495 aa16.99■□□□□ 0.31
SENP3-208ENST00000583277 MTMR7Q9Y216 660 aa16.99■□□□□ 0.31
SENP3-208ENST00000583277 PAPPA2Q9BXP8 1791 aa16.99■□□□□ 0.31
SENP3-208ENST00000583277 BAZ2BQ9UIF8 2168 aaKnown RBP16.99■□□□□ 0.31
SENP3-208ENST00000583277 PRPF3O43395 683 aaKnown RBP16.98■□□□□ 0.31
SENP3-208ENST00000583277 DTNBO60941 627 aa16.98■□□□□ 0.31
SENP3-208ENST00000583277 ZSCAN22P10073 491 aaPredicted RBP16.98■□□□□ 0.31
SENP3-208ENST00000583277 PRAMEF18Q5VWM3 479 aa16.98■□□□□ 0.31
SENP3-208ENST00000583277 CDC37L1Q7L3B6 337 aa16.98■□□□□ 0.31
SENP3-208ENST00000583277 SIAH1Q8IUQ4 282 aa16.98■□□□□ 0.31
SENP3-208ENST00000583277 SCYL3Q8IZE3 742 aa16.98■□□□□ 0.31
SENP3-208ENST00000583277 C8orf76Q96K31 380 aa16.98■□□□□ 0.31
SENP3-208ENST00000583277 WRNIP1Q96S55 665 aa16.98■□□□□ 0.31
SENP3-208ENST00000583277 ALG1Q9BT22 464 aa16.98■□□□□ 0.31
SENP3-208ENST00000583277 SPZ1Q9BXG8 430 aa16.98■□□□□ 0.31
SENP3-208ENST00000583277 GOPCQ9HD26 462 aa16.98■□□□□ 0.31
SENP3-208ENST00000583277 MTMR6Q9Y217 621 aa16.98■□□□□ 0.31
SENP3-208ENST00000583277 OTOFQ9HC10 1997 aa16.98■□□□□ 0.31
SENP3-208ENST00000583277 USP17L5A8MUK1 530 aa16.98■□□□□ 0.31
SENP3-208ENST00000583277 KLRF2D3W0D1 207 aa16.98■□□□□ 0.31
SENP3-208ENST00000583277 PPP1R12BO60237 982 aaPredicted RBP16.98■□□□□ 0.31
SENP3-208ENST00000583277 PPFIA3O75145 1194 aa16.98■□□□□ 0.31
SENP3-208ENST00000583277 ZNF543Q08ER8 600 aa16.98■□□□□ 0.31
SENP3-208ENST00000583277 USP17L2Q6R6M4 530 aa16.98■□□□□ 0.31
SENP3-208ENST00000583277 CMTR1Q8N1G2 835 aaKnown RBP16.98■□□□□ 0.31
SENP3-208ENST00000583277 SRBD1Q8N5C6 995 aaKnown RBP16.98■□□□□ 0.31
SENP3-208ENST00000583277 KLRG1Q96E93 195 aa16.98■□□□□ 0.31
SENP3-208ENST00000583277 GMCL1Q96IK5 515 aa16.98■□□□□ 0.31
SENP3-208ENST00000583277 TMX2Q9Y320 296 aa16.98■□□□□ 0.31
SENP3-208ENST00000583277 ZDHHC9Q9Y397 364 aa16.98■□□□□ 0.31
SENP3-208ENST00000583277 TRIM29Q14134 588 aa16.97■□□□□ 0.31
SENP3-208ENST00000583277 CCDC96Q2M329 555 aa16.97■□□□□ 0.31
SENP3-208ENST00000583277 NOL9Q5SY16 702 aaKnown RBP16.97■□□□□ 0.31
SENP3-208ENST00000583277 SLFN13Q68D06 897 aa16.97■□□□□ 0.31
SENP3-208ENST00000583277 STAG2Q8N3U4 1231 aa16.97■□□□□ 0.31
SENP3-208ENST00000583277 CCDC82Q8N4S0 544 aa16.97■□□□□ 0.31
SENP3-208ENST00000583277 TNPO1Q92973 898 aaKnown RBP16.97■□□□□ 0.31
SENP3-208ENST00000583277 CDCA5Q96FF9 252 aa16.97■□□□□ 0.31
SENP3-208ENST00000583277 PICK1Q9NRD5 415 aa16.97■□□□□ 0.31
SENP3-208ENST00000583277 ATP6V1DQ9Y5K8 247 aa16.97■□□□□ 0.31
SENP3-208ENST00000583277 XBP1P17861 261 aa16.96■□□□□ 0.31
SENP3-208ENST00000583277 INPP5BP32019 993 aa16.96■□□□□ 0.31
SENP3-208ENST00000583277 SLC1A4P43007 532 aa16.96■□□□□ 0.31
SENP3-208ENST00000583277 GBP4Q96PP9 640 aa16.96■□□□□ 0.31
SENP3-208ENST00000583277 CLEC11AQ9Y240 323 aa16.96■□□□□ 0.31
SENP3-208ENST00000583277 A0A1W2PRG0 241 aa16.95■□□□□ 0.3
SENP3-208ENST00000583277 F5H6K3 240 aa16.95■□□□□ 0.3
SENP3-208ENST00000583277 NDUFB10O96000 172 aa16.95■□□□□ 0.3
SENP3-208ENST00000583277 F13A1P00488 732 aa16.95■□□□□ 0.3
SENP3-208ENST00000583277 GOLGA8HP0CJ92 632 aa16.95■□□□□ 0.3
SENP3-208ENST00000583277 KLRC3Q07444 240 aa16.95■□□□□ 0.3
SENP3-208ENST00000583277 RASGRP2Q7LDG7 609 aa16.95■□□□□ 0.3
SENP3-208ENST00000583277 LDHDQ86WU2 507 aa16.95■□□□□ 0.3
SENP3-208ENST00000583277 FBXO18Q8NFZ0 1043 aa16.95■□□□□ 0.3
SENP3-208ENST00000583277 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.95■□□□□ 0.3
SENP3-208ENST00000583277 FEZ1Q99689 392 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms