RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	IVNS1ABP	Q9Y6Y0	642 aa		14.04	□□□□□ -0.16
CDK5RAP3-223	ENST00000582114	PFAS	O15067	1338 aa		14.04	□□□□□ -0.16
CDK5RAP3-223	ENST00000582114	SLC15A5	A6NIM6	579 aa		14.03	□□□□□ -0.16
CDK5RAP3-223	ENST00000582114	SOX1	O00570	391 aa	Predicted RBP	14.03	□□□□□ -0.16
CDK5RAP3-223	ENST00000582114	GLRX3	O76003	335 aa	Known RBP	14.03	□□□□□ -0.16
CDK5RAP3-223	ENST00000582114	PTPRE	P23469	700 aa		14.03	□□□□□ -0.16
CDK5RAP3-223	ENST00000582114	CNGA1	P29973	690 aa		14.03	□□□□□ -0.16
CDK5RAP3-223	ENST00000582114	LHX8	Q68G74	356 aa		14.03	□□□□□ -0.16
CDK5RAP3-223	ENST00000582114	TMEM179	Q6ZVK1	233 aa		14.03	□□□□□ -0.16
CDK5RAP3-223	ENST00000582114	LRCH3	Q96II8	777 aa		14.03	□□□□□ -0.16
CDK5RAP3-223	ENST00000582114	HAUS7	Q99871	368 aa		14.03	□□□□□ -0.16
CDK5RAP3-223	ENST00000582114	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	14.03	□□□□□ -0.16	5e-13	■■■□□ 15.6
CDK5RAP3-223	ENST00000582114	MYH8	P13535	1937 aa		14.03	□□□□□ -0.16
CDK5RAP3-223	ENST00000582114	CYP2C19	P33261	490 aa		14.02	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	ATP2B2	Q01814	1243 aa		14.02	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	ICA1	Q05084	483 aa		14.02	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	GRB14	Q14449	540 aa		14.02	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	PLS1	Q14651	629 aa		14.02	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	COG2	Q14746	738 aa		14.02	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	MFSD14C	Q5VZR4	134 aa		14.02	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	LBX2	Q6XYB7	198 aa		14.02	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	STK11IP	Q8N1F8	1099 aa		14.02	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	MOV10L1	Q9BXT6	1211 aa	Known RBP	14.02	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	LRRCC1	Q9C099	1032 aa		14.02	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	SWAP70	Q9UH65	585 aa		14.02	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	SLC4A4	Q9Y6R1	1079 aa		14.02	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	LAMA3	Q16787	3333 aa		14.02	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	USP17L12	C9JPN9	530 aa		14.01	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	USP17L21	D6R901	530 aa		14.01	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	FLOT1	O75955	427 aa		14.01	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	MAGEA10	P43363	369 aa	Predicted RBP	14.01	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	CDK8	P49336	464 aa		14.01	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	LRRC26	Q2I0M4	334 aa		14.01	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	TSHZ3	Q63HK5	1081 aa		14.01	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	SIAH1	Q8IUQ4	282 aa		14.01	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	SPATC1L	Q9H0A9	340 aa		14.01	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	PUS7L	Q9H0K6	701 aa	Known RBP	14.01	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	CHMP4B	Q9H444	224 aa	Known RBP	14.01	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	ARHGEF10L	Q9HCE6	1279 aa		14.01	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	ATP8A2	Q9NTI2	1148 aa		14.01	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	FRMPD3	Q5JV73	1810 aa		14.01	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	MYH7	P12883	1935 aa		14	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	RAD21	O60216	631 aa		14	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	ERCC3	P19447	782 aa		14	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	ADORA2A	P29274	412 aa		14	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	C12orf60	Q5U649	245 aa		14	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	DPP9	Q86TI2	863 aa		14	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	AMOTL1	Q8IY63	956 aa		14	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	TRPV1	Q8NER1	839 aa		14	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	ATG4C	Q96DT6	458 aa		14	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	GDF15	Q99988	308 aa		14	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	HOXC10	Q9NYD6	342 aa		14	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	RLF	Q13129	1914 aa		14	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	COL6A1	P12109	1028 aa		13.99	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	DSG3	P32926	999 aa		13.99	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	UBE3C	Q15386	1083 aa		13.99	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	ANO1	Q5XXA6	986 aa		13.99	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	CTR9	Q6PD62	1173 aa		13.99	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	C16orf86	Q6ZW13	317 aa		13.99	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	NCAPG2	Q86XI2	1143 aa		13.99	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	DDRGK1	Q96HY6	314 aa		13.99	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	SENP6	Q9GZR1	1112 aa	Predicted RBP	13.99	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	VCPKMT	Q9H867	229 aa		13.99	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	DDX20	Q9UHI6	824 aa	Known RBP	13.99	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	TMX2	Q9Y320	296 aa		13.99	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114		A0A0G2JMZ2	1700 aa		13.98	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	DNAH12	Q6ZR08	3092 aa		13.98	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114		A0A1W2PPC1	479 aa		13.98	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	COBL	O75128	1261 aa		13.98	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	MYCN	P04198	464 aa	Predicted RBP	13.98	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	HOXC6	P09630	235 aa		13.98	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	EEF2	P13639	858 aa	Known RBP	13.98	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	ATN1	P54259	1190 aa	Predicted RBP	13.98	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	ZSCAN25	Q6NSZ9	544 aa		13.98	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	LPAR1	Q92633	364 aa		13.98	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	SH2D4A	Q9H788	454 aa		13.98	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	FBXO28	Q9NVF7	368 aa		13.98	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	BMP8B	P34820	402 aa		13.97	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	MDM2	Q00987	491 aa	Predicted RBP	13.97	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	PRAMEF19	Q5SWL8	479 aa		13.97	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	GJC2	Q5T442	439 aa	Predicted RBP	13.97	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	CCDC17	Q96LX7	622 aa		13.97	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	UBE2O	Q9C0C9	1292 aa	Known RBP	13.97	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	ECHDC1	Q9NTX5	307 aa		13.97	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	WDR46	O15213	610 aa	Known RBP	13.96	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	CYBA	P13498	195 aa		13.96	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	TMEM132B	Q14DG7	1078 aa		13.96	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	MB21D1	Q8N884	522 aa		13.96	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	SHCBP1	Q8NEM2	672 aa		13.96	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	STRBP	Q96SI9	672 aa	Known RBP	13.96	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	COL11A1	P12107	1806 aa	Predicted RBP	13.96	□□□□□ -0.17
CDK5RAP3-223	ENST00000582114	PARP14	Q460N5	1801 aa		13.95	□□□□□ -0.18
CDK5RAP3-223	ENST00000582114	ZNF236	Q9UL36	1845 aa		13.95	□□□□□ -0.18
CDK5RAP3-223	ENST00000582114	MINDY4B	A8MYZ0	360 aa		13.95	□□□□□ -0.18
CDK5RAP3-223	ENST00000582114	STRN	O43815	780 aa		13.95	□□□□□ -0.18
CDK5RAP3-223	ENST00000582114	MSC	O60682	206 aa		13.95	□□□□□ -0.18
CDK5RAP3-223	ENST00000582114	FAM83B	Q5T0W9	1011 aa		13.95	□□□□□ -0.18
CDK5RAP3-223	ENST00000582114	OLFML2B	Q68BL8	750 aa		13.95	□□□□□ -0.18
CDK5RAP3-223	ENST00000582114	OSBP2	Q969R2	916 aa		13.95	□□□□□ -0.18
CDK5RAP3-223	ENST00000582114	GPATCH3	Q96I76	525 aa		13.95	□□□□□ -0.18

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