RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 CXCL11O14625 94 aa14.72□□□□□ -0.05
SRSF1-204ENST00000581979 IFIT3O14879 490 aaKnown RBP14.72□□□□□ -0.05
SRSF1-204ENST00000581979 POLR3DP05423 398 aaPredicted RBP14.72□□□□□ -0.05
SRSF1-204ENST00000581979 GJB2P29033 226 aa14.72□□□□□ -0.05
SRSF1-204ENST00000581979 SCRN1Q12765 414 aa14.72□□□□□ -0.05
SRSF1-204ENST00000581979 MOGSQ13724 837 aa14.72□□□□□ -0.05
SRSF1-204ENST00000581979 SART3Q15020 963 aaKnown RBP14.72□□□□□ -0.05
SRSF1-204ENST00000581979 NFKBIBQ15653 356 aa14.72□□□□□ -0.05
SRSF1-204ENST00000581979 SLC4A8Q2Y0W8 1093 aa14.72□□□□□ -0.05
SRSF1-204ENST00000581979 TMEM67Q5HYA8 995 aa14.72□□□□□ -0.05
SRSF1-204ENST00000581979 ANKRD23Q86SG2 305 aa14.72□□□□□ -0.05
SRSF1-204ENST00000581979 CHMP4CQ96CF2 233 aa14.72□□□□□ -0.05
SRSF1-204ENST00000581979 SAP30BPQ9UHR5 308 aaKnown RBP14.72□□□□□ -0.05
SRSF1-204ENST00000581979 PTPN22Q9Y2R2 807 aa14.72□□□□□ -0.05
SRSF1-204ENST00000581979 ERICH2A1L162 156 aa14.71□□□□□ -0.05
SRSF1-204ENST00000581979 CTNND1O60716 968 aaKnown RBP14.71□□□□□ -0.05
SRSF1-204ENST00000581979 PDIA3P30101 505 aaKnown RBP14.71□□□□□ -0.05
SRSF1-204ENST00000581979 EVCP57679 992 aa14.71□□□□□ -0.05
SRSF1-204ENST00000581979 CCT2P78371 535 aaKnown RBP14.71□□□□□ -0.05
SRSF1-204ENST00000581979 PDE4BQ07343 736 aa14.71□□□□□ -0.05
SRSF1-204ENST00000581979 C12orf60Q5U649 245 aa14.71□□□□□ -0.05
SRSF1-204ENST00000581979 NFXL1Q6ZNB6 911 aa14.71□□□□□ -0.05
SRSF1-204ENST00000581979 TNPO1Q92973 898 aaKnown RBP14.71□□□□□ -0.05
SRSF1-204ENST00000581979 FLT1P17948 1338 aa14.71□□□□□ -0.05
SRSF1-204ENST00000581979 TNRC18O15417 2968 aaPredicted RBP14.71□□□□□ -0.05
SRSF1-204ENST00000581979 GOLGA8BA8MQT2 603 aa14.7□□□□□ -0.06
SRSF1-204ENST00000581979 RANBP6O60518 1105 aaKnown RBP14.7□□□□□ -0.06
SRSF1-204ENST00000581979 PRDM1O75626 825 aa14.7□□□□□ -0.06
SRSF1-204ENST00000581979 FGRP09769 529 aa14.7□□□□□ -0.06
SRSF1-204ENST00000581979 PTPRAP18433 802 aa14.7□□□□□ -0.06
SRSF1-204ENST00000581979 EVX2Q03828 476 aa14.7□□□□□ -0.06
SRSF1-204ENST00000581979 PKP1Q13835 747 aa14.7□□□□□ -0.06
SRSF1-204ENST00000581979 ARHGEF6Q15052 776 aa14.7□□□□□ -0.06
SRSF1-204ENST00000581979 IGDCC4Q8TDY8 1250 aa14.7□□□□□ -0.06
SRSF1-204ENST00000581979 ZKSCAN3Q9BRR0 538 aa14.7□□□□□ -0.06
SRSF1-204ENST00000581979 UBAC1Q9BSL1 405 aa14.7□□□□□ -0.06
SRSF1-204ENST00000581979 MTA3Q9BTC8 594 aa14.7□□□□□ -0.06
SRSF1-204ENST00000581979 OSBPL5Q9H0X9 879 aaPredicted RBP14.7□□□□□ -0.06
SRSF1-204ENST00000581979 PICK1Q9NRD5 415 aa14.7□□□□□ -0.06
SRSF1-204ENST00000581979 BRPF3Q9ULD4 1205 aa14.7□□□□□ -0.06
SRSF1-204ENST00000581979 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.7□□□□□ -0.06
SRSF1-204ENST00000581979 CENPFP49454 3210 aa14.7□□□□□ -0.06
SRSF1-204ENST00000581979 ROBO3Q96MS0 1386 aa14.69□□□□□ -0.06
SRSF1-204ENST00000581979 CCDC69A6NI79 296 aa14.69□□□□□ -0.06
SRSF1-204ENST00000581979 PDHXO00330 501 aa14.69□□□□□ -0.06
SRSF1-204ENST00000581979 ORC4O43929 436 aa14.69□□□□□ -0.06
SRSF1-204ENST00000581979 SLURP2P0DP57 97 aa14.69□□□□□ -0.06
SRSF1-204ENST00000581979 WTAPQ15007 396 aa14.69□□□□□ -0.06
SRSF1-204ENST00000581979 LY9Q9HBG7 655 aa14.69□□□□□ -0.06
SRSF1-204ENST00000581979 AFG3L2Q9Y4W6 797 aa14.69□□□□□ -0.06
SRSF1-204ENST00000581979 ZHX2Q9Y6X8 837 aa14.69□□□□□ -0.06
SRSF1-204ENST00000581979 DTNBO60941 627 aa14.69□□□□□ -0.06
SRSF1-204ENST00000581979 LIFRP42702 1097 aa14.69□□□□□ -0.06
SRSF1-204ENST00000581979 C17orf99Q6UX52 265 aa14.69□□□□□ -0.06
SRSF1-204ENST00000581979 LLPHQ9BRT6 129 aaKnown RBP14.69□□□□□ -0.06
SRSF1-204ENST00000581979 DOCK1Q14185 1865 aa14.69□□□□□ -0.06
SRSF1-204ENST00000581979 ADGRA2Q96PE1 1338 aa14.68□□□□□ -0.06
SRSF1-204ENST00000581979 A0A0G2JLL6 359 aaPredicted RBP14.68□□□□□ -0.06
SRSF1-204ENST00000581979 LACTBP83111 547 aaPredicted RBP14.68□□□□□ -0.06
SRSF1-204ENST00000581979 GPAT2Q6NUI2 795 aa14.68□□□□□ -0.06
SRSF1-204ENST00000581979 SYNE3Q6ZMZ3 975 aa14.68□□□□□ -0.06
SRSF1-204ENST00000581979 PRRT2Q7Z6L0 340 aaPredicted RBP14.68□□□□□ -0.06
SRSF1-204ENST00000581979 IQCA1Q86XH1 822 aa14.68□□□□□ -0.06
SRSF1-204ENST00000581979 ARMC5Q96C12 935 aa14.68□□□□□ -0.06
SRSF1-204ENST00000581979 GBP4Q96PP9 640 aa14.68□□□□□ -0.06
SRSF1-204ENST00000581979 MKNK2Q9HBH9 465 aa14.68□□□□□ -0.06
SRSF1-204ENST00000581979 PHIPQ8WWQ0 1821 aa14.68□□□□□ -0.06
SRSF1-204ENST00000581979 TNKSO95271 1327 aa14.67□□□□□ -0.06
SRSF1-204ENST00000581979 GNRH1P01148 92 aa14.67□□□□□ -0.06
SRSF1-204ENST00000581979 PLCD1P51178 756 aa14.67□□□□□ -0.06
SRSF1-204ENST00000581979 FOXD4L5Q5VV16 416 aaPredicted RBP14.67□□□□□ -0.06
SRSF1-204ENST00000581979 FASTKD5Q7L8L6 764 aaKnown RBP14.67□□□□□ -0.06
SRSF1-204ENST00000581979 SGMS1Q86VZ5 419 aa14.67□□□□□ -0.06
SRSF1-204ENST00000581979 RAB11FIP4Q86YS3 637 aa14.67□□□□□ -0.06
SRSF1-204ENST00000581979 TMTC2Q8N394 836 aa14.67□□□□□ -0.06
SRSF1-204ENST00000581979 FOXD4L4Q8WXT5 416 aaPredicted RBP14.67□□□□□ -0.06
SRSF1-204ENST00000581979 DYNLL2Q96FJ2 89 aa14.67□□□□□ -0.06
SRSF1-204ENST00000581979 DHX36Q9H2U1 1008 aaKnown RBP14.67□□□□□ -0.06
SRSF1-204ENST00000581979 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.67□□□□□ -0.06
SRSF1-204ENST00000581979 ZNF287Q9HBT7 754 aa14.67□□□□□ -0.06
SRSF1-204ENST00000581979 SENP2Q9HC62 589 aa14.67□□□□□ -0.06
SRSF1-204ENST00000581979 NCOA5Q9HCD5 579 aaKnown RBP14.67□□□□□ -0.06
SRSF1-204ENST00000581979 ZDHHC9Q9Y397 364 aa14.67□□□□□ -0.06
SRSF1-204ENST00000581979 SLC12A7Q9Y666 1083 aa14.67□□□□□ -0.06
SRSF1-204ENST00000581979 TSPY2A6NKD2 308 aa14.66□□□□□ -0.06
SRSF1-204ENST00000581979 ZBTB43O43298 467 aa14.66□□□□□ -0.06
SRSF1-204ENST00000581979 DHX16O60231 1041 aaKnown RBP14.66□□□□□ -0.06
SRSF1-204ENST00000581979 JAK2O60674 1132 aa14.66□□□□□ -0.06
SRSF1-204ENST00000581979 BRD1O95696 1058 aa14.66□□□□□ -0.06
SRSF1-204ENST00000581979 NT5C2P49902 561 aa14.66□□□□□ -0.06
SRSF1-204ENST00000581979 METAP2P50579 478 aaKnown RBP eCLIP14.66□□□□□ -0.06
SRSF1-204ENST00000581979 KIF22Q14807 665 aa14.66□□□□□ -0.06
SRSF1-204ENST00000581979 FAM47AQ5JRC9 791 aa14.66□□□□□ -0.06
SRSF1-204ENST00000581979 APOA5Q6Q788 366 aa14.66□□□□□ -0.06
SRSF1-204ENST00000581979 NSUN7Q8NE18 718 aaKnown RBP14.66□□□□□ -0.06
SRSF1-204ENST00000581979 ZSCAN10Q96SZ4 725 aaPredicted RBP14.66□□□□□ -0.06
SRSF1-204ENST00000581979 PI4KBQ9UBF8 816 aa14.66□□□□□ -0.06
SRSF1-204ENST00000581979 HERC5Q9UII4 1024 aaKnown RBP14.66□□□□□ -0.06
SRSF1-204ENST00000581979 PTPRFP10586 1907 aa14.66□□□□□ -0.06
SRSF1-204ENST00000581979 MYH8P13535 1937 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms