RNA–Protein interactions for RNA: ENST00000581832.1

SMARCD2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-209ENST00000581832 STK11IPQ8N1F8 1099 aa14.79□□□□□ -0.04
SMARCD2-209ENST00000581832 GTF3C2Q8WUA4 911 aaPredicted RBP14.79□□□□□ -0.04
SMARCD2-209ENST00000581832 RILPL2Q969X0 211 aa14.79□□□□□ -0.04
SMARCD2-209ENST00000581832 NACAP1Q9BZK3 213 aa14.79□□□□□ -0.04
SMARCD2-209ENST00000581832 VCPKMTQ9H867 229 aa14.79□□□□□ -0.04
SMARCD2-209ENST00000581832 SPDYE16A6NNV3 312 aaPredicted RBP14.78□□□□□ -0.04
SMARCD2-209ENST00000581832 TRIM6-TRIM34B2RNG4 842 aa14.78□□□□□ -0.04
SMARCD2-209ENST00000581832 TNPO2O14787 897 aaKnown RBP14.78□□□□□ -0.04
SMARCD2-209ENST00000581832 PRDM1O75626 825 aa14.78□□□□□ -0.04
SMARCD2-209ENST00000581832 FGRP09769 529 aa14.78□□□□□ -0.04
SMARCD2-209ENST00000581832 HSPD1P10809 573 aaKnown RBP14.78□□□□□ -0.04
SMARCD2-209ENST00000581832 GRK4P32298 578 aa14.78□□□□□ -0.04
SMARCD2-209ENST00000581832 ERVK-9P63128 1117 aa14.78□□□□□ -0.04
SMARCD2-209ENST00000581832 ERVK-24P63145 666 aa14.78□□□□□ -0.04
SMARCD2-209ENST00000581832 MLLT1Q03111 559 aaPredicted RBP14.78□□□□□ -0.04
SMARCD2-209ENST00000581832 PPARAQ07869 468 aa14.78□□□□□ -0.04
SMARCD2-209ENST00000581832 NBPF11Q86T75 865 aa14.78□□□□□ -0.04
SMARCD2-209ENST00000581832 GPRC5AQ8NFJ5 357 aa14.78□□□□□ -0.04
SMARCD2-209ENST00000581832 RAET1EQ8TD07 263 aa14.78□□□□□ -0.04
SMARCD2-209ENST00000581832 LPAR1Q92633 364 aa14.78□□□□□ -0.04
SMARCD2-209ENST00000581832 NAPBQ9H115 298 aa14.78□□□□□ -0.04
SMARCD2-209ENST00000581832 MKNK2Q9HBH9 465 aa14.78□□□□□ -0.04
SMARCD2-209ENST00000581832 ARHGEF10LQ9HCE6 1279 aa14.78□□□□□ -0.04
SMARCD2-209ENST00000581832 BTBD7Q9P203 1132 aa14.78□□□□□ -0.04
SMARCD2-209ENST00000581832 ANAPC4Q9UJX5 808 aa14.78□□□□□ -0.04
SMARCD2-209ENST00000581832 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.78□□□□□ -0.04
SMARCD2-209ENST00000581832 RABGAP1Q9Y3P9 1069 aa14.78□□□□□ -0.04
SMARCD2-209ENST00000581832 FGAP02671 866 aa14.77□□□□□ -0.05
SMARCD2-209ENST00000581832 GSPT1P15170 499 aaKnown RBP14.77□□□□□ -0.05
SMARCD2-209ENST00000581832 COG2Q14746 738 aa14.77□□□□□ -0.05
SMARCD2-209ENST00000581832 PXYLP1Q8TE99 480 aa14.77□□□□□ -0.05
SMARCD2-209ENST00000581832 MKL1Q969V6 931 aa14.77□□□□□ -0.05
SMARCD2-209ENST00000581832 PORCNQ9H237 461 aa14.77□□□□□ -0.05
SMARCD2-209ENST00000581832 INCENPQ9NQS7 918 aa14.77□□□□□ -0.05
SMARCD2-209ENST00000581832 NYAP2Q9P242 653 aa14.77□□□□□ -0.05
SMARCD2-209ENST00000581832 A0A0G2JMZ2 1700 aa14.77□□□□□ -0.05
SMARCD2-209ENST00000581832 PLIN4Q96Q06 1357 aa14.76□□□□□ -0.05
SMARCD2-209ENST00000581832 DSG3P32926 999 aa14.76□□□□□ -0.05
SMARCD2-209ENST00000581832 CTDSPL2Q05D32 466 aa14.76□□□□□ -0.05
SMARCD2-209ENST00000581832 MTFR1Q15390 333 aa14.76□□□□□ -0.05
SMARCD2-209ENST00000581832 SPICE1Q8N0Z3 855 aa14.76□□□□□ -0.05
SMARCD2-209ENST00000581832 NEDD1Q8NHV4 660 aa14.76□□□□□ -0.05
SMARCD2-209ENST00000581832 USP6NLQ92738 828 aa14.76□□□□□ -0.05
SMARCD2-209ENST00000581832 COA7Q96BR5 231 aa14.76□□□□□ -0.05
SMARCD2-209ENST00000581832 ADAMTS5Q9UNA0 930 aa14.76□□□□□ -0.05
SMARCD2-209ENST00000581832 COL11A1P12107 1806 aaPredicted RBP14.76□□□□□ -0.05
SMARCD2-209ENST00000581832 ZMYM6O95789 1325 aa14.75□□□□□ -0.05
SMARCD2-209ENST00000581832 CCDC171Q6TFL3 1326 aa14.75□□□□□ -0.05
SMARCD2-209ENST00000581832 ZNFX1Q9P2E3 1918 aaKnown RBP14.75□□□□□ -0.05
SMARCD2-209ENST00000581832 WDR46O15213 610 aaKnown RBP14.75□□□□□ -0.05
SMARCD2-209ENST00000581832 ADCY3O60266 1144 aa14.75□□□□□ -0.05
SMARCD2-209ENST00000581832 EN2P19622 333 aaPredicted RBP14.75□□□□□ -0.05
SMARCD2-209ENST00000581832 ZNF444Q8N0Y2 327 aaPredicted RBP14.75□□□□□ -0.05
SMARCD2-209ENST00000581832 SLAIN1Q8ND83 568 aa14.75□□□□□ -0.05
SMARCD2-209ENST00000581832 CEP95Q96GE4 821 aa14.75□□□□□ -0.05
SMARCD2-209ENST00000581832 PAGR1Q9BTK6 254 aa14.75□□□□□ -0.05
SMARCD2-209ENST00000581832 IL25Q9H293 177 aa14.75□□□□□ -0.05
SMARCD2-209ENST00000581832 SH2D4AQ9H788 454 aa14.75□□□□□ -0.05
SMARCD2-209ENST00000581832 ZNF287Q9HBT7 754 aa14.75□□□□□ -0.05
SMARCD2-209ENST00000581832 MTMR4Q9NYA4 1195 aa14.75□□□□□ -0.05
SMARCD2-209ENST00000581832 HOXC10Q9NYD6 342 aa14.75□□□□□ -0.05
SMARCD2-209ENST00000581832 ELNP15502 786 aa14.74□□□□□ -0.05
SMARCD2-209ENST00000581832 MAPK4P31152 587 aa14.74□□□□□ -0.05
SMARCD2-209ENST00000581832 NOVP48745 357 aa14.74□□□□□ -0.05
SMARCD2-209ENST00000581832 PDE4BQ07343 736 aa14.74□□□□□ -0.05
SMARCD2-209ENST00000581832 FAM47AQ5JRC9 791 aa14.74□□□□□ -0.05
SMARCD2-209ENST00000581832 MORN1Q5T089 497 aa14.74□□□□□ -0.05
SMARCD2-209ENST00000581832 TTC22Q5TAA0 569 aa14.74□□□□□ -0.05
SMARCD2-209ENST00000581832 GPR142Q7Z601 462 aa14.74□□□□□ -0.05
SMARCD2-209ENST00000581832 NBPF3Q9H094 633 aa14.74□□□□□ -0.05
SMARCD2-209ENST00000581832 F5H6K3 240 aa14.73□□□□□ -0.05
SMARCD2-209ENST00000581832 ORC4O43929 436 aa14.73□□□□□ -0.05
SMARCD2-209ENST00000581832 TFAP4Q01664 338 aa14.73□□□□□ -0.05
SMARCD2-209ENST00000581832 ATP2B2Q01814 1243 aa14.73□□□□□ -0.05
SMARCD2-209ENST00000581832 KLRC3Q07444 240 aa14.73□□□□□ -0.05
SMARCD2-209ENST00000581832 CWC27Q6UX04 472 aaKnown RBP14.73□□□□□ -0.05
SMARCD2-209ENST00000581832 NKX2-3Q8TAU0 364 aa14.73□□□□□ -0.05
SMARCD2-209ENST00000581832 TANGO6Q9C0B7 1094 aa14.73□□□□□ -0.05
SMARCD2-209ENST00000581832 IL17RBQ9NRM6 502 aa14.73□□□□□ -0.05
SMARCD2-209ENST00000581832 FBXO28Q9NVF7 368 aa14.73□□□□□ -0.05
SMARCD2-209ENST00000581832 CLIP2Q9UDT6 1046 aa14.73□□□□□ -0.05
SMARCD2-209ENST00000581832 SYNPO2Q9UMS6 1093 aa14.73□□□□□ -0.05
SMARCD2-209ENST00000581832 FLOT1O75955 427 aa14.72□□□□□ -0.05
SMARCD2-209ENST00000581832 TTLL1O95922 423 aa14.72□□□□□ -0.05
SMARCD2-209ENST00000581832 NDUFB10O96000 172 aa14.72□□□□□ -0.05
SMARCD2-209ENST00000581832 MYCP01106 439 aaPredicted RBP14.72□□□□□ -0.05
SMARCD2-209ENST00000581832 SLC3A2P08195 630 aaKnown RBP14.72□□□□□ -0.05
SMARCD2-209ENST00000581832 XRCC5P13010 732 aaKnown RBP14.72□□□□□ -0.05
SMARCD2-209ENST00000581832 REPS2Q8NFH8 660 aa14.72□□□□□ -0.05
SMARCD2-209ENST00000581832 ATG4CQ96DT6 458 aa14.72□□□□□ -0.05
SMARCD2-209ENST00000581832 TMEM106CQ9BVX2 250 aa14.72□□□□□ -0.05
SMARCD2-209ENST00000581832 GOPCQ9HD26 462 aa14.72□□□□□ -0.05
SMARCD2-209ENST00000581832 CEP290O15078 2479 aa14.71□□□□□ -0.05
SMARCD2-209ENST00000581832 HIP1O00291 1037 aa14.71□□□□□ -0.05
SMARCD2-209ENST00000581832 IGHA2P01877 340 aa14.71□□□□□ -0.05
SMARCD2-209ENST00000581832 INHAP05111 366 aa14.71□□□□□ -0.05
SMARCD2-209ENST00000581832 TSPY3P0CV98 308 aa14.71□□□□□ -0.05
SMARCD2-209ENST00000581832 TSPY8P0CW00 308 aa14.71□□□□□ -0.05
SMARCD2-209ENST00000581832 CCL5P13501 91 aa14.71□□□□□ -0.05
SMARCD2-209ENST00000581832 FAM83BQ5T0W9 1011 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms