RNA–Protein interactions for RNA: ENST00000581335.1

NUP85-217, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-217ENST00000581335 TMED8Q6PL24 325 aaPredicted RBP10.67□□□□□ -0.7
NUP85-217ENST00000581335 ERC1Q8IUD2 1116 aa10.67□□□□□ -0.7
NUP85-217ENST00000581335 MAGEB6Q8N7X4 407 aa10.67□□□□□ -0.7
NUP85-217ENST00000581335 MIGA1Q8NAN2 632 aa10.67□□□□□ -0.7
NUP85-217ENST00000581335 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.67□□□□□ -0.7
NUP85-217ENST00000581335 ANTXR1Q9H6X2 564 aa10.67□□□□□ -0.7
NUP85-217ENST00000581335 ZBTB21Q9ULJ3 1066 aa10.67□□□□□ -0.7
NUP85-217ENST00000581335 NDUFB9Q9Y6M9 179 aa10.67□□□□□ -0.7
NUP85-217ENST00000581335 RPTORQ8N122 1335 aa10.66□□□□□ -0.7
NUP85-217ENST00000581335 HMGCRP04035 888 aa10.66□□□□□ -0.7
NUP85-217ENST00000581335 OATP04181 439 aa10.66□□□□□ -0.7
NUP85-217ENST00000581335 HERVK_113P62684 666 aa10.66□□□□□ -0.7
NUP85-217ENST00000581335 Q3C1V9 767 aa10.66□□□□□ -0.7
NUP85-217ENST00000581335 HSP90AB4PQ58FF6 505 aa10.66□□□□□ -0.7
NUP85-217ENST00000581335 C6orf132Q5T0Z8 1188 aa10.66□□□□□ -0.7
NUP85-217ENST00000581335 USP17L2Q6R6M4 530 aa10.66□□□□□ -0.7
NUP85-217ENST00000581335 PADI6Q6TGC4 694 aa10.66□□□□□ -0.7
NUP85-217ENST00000581335 AACSQ86V21 672 aa10.66□□□□□ -0.7
NUP85-217ENST00000581335 GPRC5AQ8NFJ5 357 aa10.66□□□□□ -0.7
NUP85-217ENST00000581335 NLRP7Q8WX94 980 aa10.66□□□□□ -0.7
NUP85-217ENST00000581335 TXNRD2Q9NNW7 524 aa10.66□□□□□ -0.7
NUP85-217ENST00000581335 HMX1Q9NP08 348 aaPredicted RBP10.66□□□□□ -0.7
NUP85-217ENST00000581335 RBM27Q9P2N5 1060 aaKnown RBP10.66□□□□□ -0.7
NUP85-217ENST00000581335 RBPJLQ9UBG7 517 aa10.66□□□□□ -0.7
NUP85-217ENST00000581335 EXOC6BQ9Y2D4 811 aa10.66□□□□□ -0.7
NUP85-217ENST00000581335 ALPK3Q96L96 1907 aa10.65□□□□□ -0.7
NUP85-217ENST00000581335 APBB1O00213 710 aa10.65□□□□□ -0.7
NUP85-217ENST00000581335 TRAK2O60296 914 aa10.65□□□□□ -0.7
NUP85-217ENST00000581335 GH2P01242 217 aa10.65□□□□□ -0.7
NUP85-217ENST00000581335 CYP2B6P20813 491 aa10.65□□□□□ -0.7
NUP85-217ENST00000581335 TRIM32Q13049 653 aa10.65□□□□□ -0.7
NUP85-217ENST00000581335 TTC6Q86TZ1 520 aa10.65□□□□□ -0.7
NUP85-217ENST00000581335 ANKLE1Q8NAG6 615 aa10.65□□□□□ -0.7
NUP85-217ENST00000581335 PANK1Q8TE04 598 aa10.65□□□□□ -0.7
NUP85-217ENST00000581335 GTF3C2Q8WUA4 911 aaPredicted RBP10.65□□□□□ -0.7
NUP85-217ENST00000581335 PAWRQ96IZ0 340 aaKnown RBP10.65□□□□□ -0.7
NUP85-217ENST00000581335 NUDT12Q9BQG2 462 aa10.65□□□□□ -0.7
NUP85-217ENST00000581335 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.65□□□□□ -0.7
NUP85-217ENST00000581335 EHD4Q9H223 541 aa10.65□□□□□ -0.7
NUP85-217ENST00000581335 SERPINB13Q9UIV8 391 aa10.65□□□□□ -0.7
NUP85-217ENST00000581335 ZBED9Q6R2W3 1325 aa10.64□□□□□ -0.71
NUP85-217ENST00000581335 PEX10O60683 326 aa10.64□□□□□ -0.71
NUP85-217ENST00000581335 XRCC5P13010 732 aaKnown RBP10.64□□□□□ -0.71
NUP85-217ENST00000581335 MAPK4P31152 587 aa10.64□□□□□ -0.71
NUP85-217ENST00000581335 ERVK-9P63128 1117 aa10.64□□□□□ -0.71
NUP85-217ENST00000581335 ERVK-24P63145 666 aa10.64□□□□□ -0.71
NUP85-217ENST00000581335 TTF1Q15361 905 aaPredicted RBP10.64□□□□□ -0.71
NUP85-217ENST00000581335 CERKLQ49MI3 558 aaPredicted RBP10.64□□□□□ -0.71
NUP85-217ENST00000581335 DIEXFQ68CQ4 756 aaKnown RBP10.64□□□□□ -0.71
NUP85-217ENST00000581335 NECAB2Q7Z6G3 386 aa10.64□□□□□ -0.71
NUP85-217ENST00000581335 RHPN1Q8TCX5 695 aa10.64□□□□□ -0.71
NUP85-217ENST00000581335 SOCS4Q8WXH5 440 aa10.64□□□□□ -0.71
NUP85-217ENST00000581335 TRIB2Q92519 343 aa10.64□□□□□ -0.71
NUP85-217ENST00000581335 C12orf42Q96LP6 360 aa10.64□□□□□ -0.71
NUP85-217ENST00000581335 RIOK1Q9BRS2 568 aaKnown RBP10.64□□□□□ -0.71
NUP85-217ENST00000581335 PRO3102Q9H379 93 aa10.64□□□□□ -0.71
NUP85-217ENST00000581335 IL1RAPL2Q9NP60 686 aa10.64□□□□□ -0.71
NUP85-217ENST00000581335 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.64□□□□□ -0.71
NUP85-217ENST00000581335 NAV1Q8NEY1 1877 aa10.64□□□□□ -0.71
NUP85-217ENST00000581335 MAGEB6P1A0A0J9YX57 407 aa10.63□□□□□ -0.71
NUP85-217ENST00000581335 USP17L15C9J2P7 530 aa10.63□□□□□ -0.71
NUP85-217ENST00000581335 USP17L13C9JLJ4 530 aa10.63□□□□□ -0.71
NUP85-217ENST00000581335 USP17L11C9JVI0 530 aa10.63□□□□□ -0.71
NUP85-217ENST00000581335 USP17L18D6R9N7 530 aa10.63□□□□□ -0.71
NUP85-217ENST00000581335 USP17L22D6RA61 530 aa10.63□□□□□ -0.71
NUP85-217ENST00000581335 USP17L17D6RBQ6 530 aa10.63□□□□□ -0.71
NUP85-217ENST00000581335 USP17L19D6RCP7 530 aa10.63□□□□□ -0.71
NUP85-217ENST00000581335 USP17L20D6RJB6 530 aa10.63□□□□□ -0.71
NUP85-217ENST00000581335 POLR3DP05423 398 aaPredicted RBP10.63□□□□□ -0.71
NUP85-217ENST00000581335 PLCD1P51178 756 aa10.63□□□□□ -0.71
NUP85-217ENST00000581335 USP14P54578 494 aa10.63□□□□□ -0.71
NUP85-217ENST00000581335 USP17L24Q0WX57 530 aa10.63□□□□□ -0.71
NUP85-217ENST00000581335 PDE3AQ14432 1141 aa10.63□□□□□ -0.71
NUP85-217ENST00000581335 RAB3GAP1Q15042 981 aa10.63□□□□□ -0.71
NUP85-217ENST00000581335 ABCB5Q2M3G0 1257 aa10.63□□□□□ -0.71
NUP85-217ENST00000581335 MAP3K21Q5TCX8 1036 aa10.63□□□□□ -0.71
NUP85-217ENST00000581335 POTEEQ6S8J3 1075 aa10.63□□□□□ -0.71
NUP85-217ENST00000581335 CCAR1Q8IX12 1150 aaKnown RBP10.63□□□□□ -0.71
NUP85-217ENST00000581335 RPAP2Q8IXW5 612 aaPredicted RBP10.63□□□□□ -0.71
NUP85-217ENST00000581335 TRMT44Q8IYL2 757 aaKnown RBP10.63□□□□□ -0.71
NUP85-217ENST00000581335 DIS3LQ8TF46 1054 aaKnown RBP10.63□□□□□ -0.71
NUP85-217ENST00000581335 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.63□□□□□ -0.71
NUP85-217ENST00000581335 USP6NLQ92738 828 aa10.63□□□□□ -0.71
NUP85-217ENST00000581335 PAGR1Q9BTK6 254 aa10.63□□□□□ -0.71
NUP85-217ENST00000581335 PORCNQ9H237 461 aa10.63□□□□□ -0.71
NUP85-217ENST00000581335 CABP5Q9NP86 173 aa10.63□□□□□ -0.71
NUP85-217ENST00000581335 RABGAP1Q9Y3P9 1069 aa10.63□□□□□ -0.71
NUP85-217ENST00000581335 DDX60LQ5H9U9 1706 aaKnown RBP10.63□□□□□ -0.71
NUP85-217ENST00000581335 SHMT1P34896 483 aa10.62□□□□□ -0.71
NUP85-217ENST00000581335 ZYXQ15942 572 aaKnown RBP10.62□□□□□ -0.71
NUP85-217ENST00000581335 MORN1Q5T089 497 aa10.62□□□□□ -0.71
NUP85-217ENST00000581335 SLC9C2Q5TAH2 1124 aa10.62□□□□□ -0.71
NUP85-217ENST00000581335 MYSM1Q5VVJ2 828 aa10.62□□□□□ -0.71
NUP85-217ENST00000581335 CATSPERGQ6ZRH7 1159 aa10.62□□□□□ -0.71
NUP85-217ENST00000581335 GPR142Q7Z601 462 aa10.62□□□□□ -0.71
NUP85-217ENST00000581335 PLEKHH3Q7Z736 793 aa10.62□□□□□ -0.71
NUP85-217ENST00000581335 CLASRPQ8N2M8 674 aaKnown RBP10.62□□□□□ -0.71
NUP85-217ENST00000581335 KIF1BPQ96EK5 621 aa10.62□□□□□ -0.71
NUP85-217ENST00000581335 FEZ1Q99689 392 aa10.62□□□□□ -0.71
NUP85-217ENST00000581335 NBPF3Q9H094 633 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms