RNA–Protein interactions for RNA: ENST00000580573.1

KPNB1-210, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-210ENST00000580573 TSPY8P0CW00 308 aa9.31□□□□□ -0.92
KPNB1-210ENST00000580573 CALM1P0DP23 149 aa9.31□□□□□ -0.92
KPNB1-210ENST00000580573 CALM2P0DP24 149 aa9.31□□□□□ -0.92
KPNB1-210ENST00000580573 CALM3P0DP25 149 aa9.31□□□□□ -0.92
KPNB1-210ENST00000580573 IFNAR1P17181 557 aa9.31□□□□□ -0.92
KPNB1-210ENST00000580573 PDCP20941 246 aa9.31□□□□□ -0.92
KPNB1-210ENST00000580573 CDC27P30260 824 aa9.31□□□□□ -0.92
KPNB1-210ENST00000580573 METAP2P50579 478 aaKnown RBP eCLIP9.31□□□□□ -0.92
KPNB1-210ENST00000580573 NBPF9Q3BBW0 867 aa9.31□□□□□ -0.92
KPNB1-210ENST00000580573 FAM47AQ5JRC9 791 aa9.31□□□□□ -0.92
KPNB1-210ENST00000580573 IFIT1BQ5T764 474 aaKnown RBP9.31□□□□□ -0.92
KPNB1-210ENST00000580573 NBPF11Q86T75 865 aa9.31□□□□□ -0.92
KPNB1-210ENST00000580573 ZNF444Q8N0Y2 327 aaPredicted RBP9.31□□□□□ -0.92
KPNB1-210ENST00000580573 MKNK2Q9HBH9 465 aa9.31□□□□□ -0.92
KPNB1-210ENST00000580573 GPRC5DQ9NZD1 345 aa9.31□□□□□ -0.92
KPNB1-210ENST00000580573 TMOD2Q9NZR1 351 aa9.31□□□□□ -0.92
KPNB1-210ENST00000580573 MTMR6Q9Y217 621 aa9.31□□□□□ -0.92
KPNB1-210ENST00000580573 BAZ2BQ9UIF8 2168 aaKnown RBP9.3□□□□□ -0.92
KPNB1-210ENST00000580573 CCDC196A0A1B0GTZ2 297 aa9.3□□□□□ -0.92
KPNB1-210ENST00000580573 GOLGA8AA7E2F4 631 aa9.3□□□□□ -0.92
KPNB1-210ENST00000580573 MYO1BO43795 1136 aa9.3□□□□□ -0.92
KPNB1-210ENST00000580573 CDKL5O76039 1030 aa9.3□□□□□ -0.92
KPNB1-210ENST00000580573 CCT2P78371 535 aaKnown RBP9.3□□□□□ -0.92
KPNB1-210ENST00000580573 TCP10Q12799 353 aa9.3□□□□□ -0.92
KPNB1-210ENST00000580573 SLC4A8Q2Y0W8 1093 aa9.3□□□□□ -0.92
KPNB1-210ENST00000580573 TMEM92Q6UXU6 159 aa9.3□□□□□ -0.92
KPNB1-210ENST00000580573 MICU3Q86XE3 530 aa9.3□□□□□ -0.92
KPNB1-210ENST00000580573 STK11IPQ8N1F8 1099 aa9.3□□□□□ -0.92
KPNB1-210ENST00000580573 FANCBQ8NB91 859 aa9.3□□□□□ -0.92
KPNB1-210ENST00000580573 TEPSINQ96N21 525 aa9.3□□□□□ -0.92
KPNB1-210ENST00000580573 RBM28Q9NW13 759 aaKnown RBP9.3□□□□□ -0.92
KPNB1-210ENST00000580573 MTMR4Q9NYA4 1195 aa9.3□□□□□ -0.92
KPNB1-210ENST00000580573 CNOT7Q9UIV1 285 aaKnown RBP9.3□□□□□ -0.92
KPNB1-210ENST00000580573 SYNPO2Q9UMS6 1093 aa9.3□□□□□ -0.92
KPNB1-210ENST00000580573 KIF3AQ9Y496 699 aa9.3□□□□□ -0.92
KPNB1-210ENST00000580573 PTPRFP10586 1907 aa9.29□□□□□ -0.92
KPNB1-210ENST00000580573 CLRN2A0PK11 232 aa9.29□□□□□ -0.92
KPNB1-210ENST00000580573 SOCS7O14512 581 aa9.29□□□□□ -0.92
KPNB1-210ENST00000580573 FMNL1O95466 1100 aaPredicted RBP9.29□□□□□ -0.92
KPNB1-210ENST00000580573 SNHG28P0DPA3 235 aa9.29□□□□□ -0.92
KPNB1-210ENST00000580573 ZSCAN22P10073 491 aaPredicted RBP9.29□□□□□ -0.92
KPNB1-210ENST00000580573 AKR1B1P15121 316 aa9.29□□□□□ -0.92
KPNB1-210ENST00000580573 ADD1P35611 737 aaKnown RBP9.29□□□□□ -0.92
KPNB1-210ENST00000580573 TNFAIP1Q13829 316 aa9.29□□□□□ -0.92
KPNB1-210ENST00000580573 GRM4Q14833 912 aa9.29□□□□□ -0.92
KPNB1-210ENST00000580573 NFKBIBQ15653 356 aa9.29□□□□□ -0.92
KPNB1-210ENST00000580573 RTN1Q16799 776 aa9.29□□□□□ -0.92
KPNB1-210ENST00000580573 KIF4BQ2VIQ3 1234 aa9.29□□□□□ -0.92
KPNB1-210ENST00000580573 PPP4R3BQ5MIZ7 849 aa9.29□□□□□ -0.92
KPNB1-210ENST00000580573 NFXL1Q6ZNB6 911 aa9.29□□□□□ -0.92
KPNB1-210ENST00000580573 TMTC3Q6ZXV5 915 aa9.29□□□□□ -0.92
KPNB1-210ENST00000580573 CATIPQ7Z7H3 387 aa9.29□□□□□ -0.92
KPNB1-210ENST00000580573 PNMA1Q8ND90 353 aa9.29□□□□□ -0.92
KPNB1-210ENST00000580573 MKL1Q969V6 931 aa9.29□□□□□ -0.92
KPNB1-210ENST00000580573 CEP95Q96GE4 821 aa9.29□□□□□ -0.92
KPNB1-210ENST00000580573 CSRNP1Q96S65 589 aa9.29□□□□□ -0.92
KPNB1-210ENST00000580573 TMEM47Q9BQJ4 181 aa9.29□□□□□ -0.92
KPNB1-210ENST00000580573 MYL10Q9BUA6 226 aa9.29□□□□□ -0.92
KPNB1-210ENST00000580573 RNF26Q9BY78 433 aaPredicted RBP9.29□□□□□ -0.92
KPNB1-210ENST00000580573 CNTNAP5Q8WYK1 1306 aa9.29□□□□□ -0.92
KPNB1-210ENST00000580573 PITPNM2Q9BZ72 1349 aa9.29□□□□□ -0.92
KPNB1-210ENST00000580573 SSC5DA1L4H1 1573 aa9.29□□□□□ -0.92
KPNB1-210ENST00000580573 F13A1P00488 732 aa9.28□□□□□ -0.92
KPNB1-210ENST00000580573 TOP1P11387 765 aaKnown RBP9.28□□□□□ -0.92
KPNB1-210ENST00000580573 RXRAP19793 462 aa9.28□□□□□ -0.92
KPNB1-210ENST00000580573 SMARCA1P28370 1054 aa9.28□□□□□ -0.92
KPNB1-210ENST00000580573 GUCY1A2P33402 732 aa9.28□□□□□ -0.92
KPNB1-210ENST00000580573 LARP1BQ659C4 914 aaKnown RBP9.28□□□□□ -0.92
KPNB1-210ENST00000580573 CPLX2Q6PUV4 134 aaKnown RBP9.28□□□□□ -0.92
KPNB1-210ENST00000580573 SYNE3Q6ZMZ3 975 aa9.28□□□□□ -0.92
KPNB1-210ENST00000580573 SAMD7Q7Z3H4 446 aa9.28□□□□□ -0.92
KPNB1-210ENST00000580573 CRACR2BQ8N4Y2 399 aaPredicted RBP9.28□□□□□ -0.92
KPNB1-210ENST00000580573 RNF181Q9P0P0 153 aa9.28□□□□□ -0.92
KPNB1-210ENST00000580573 PALM3A6NDB9 673 aaPredicted RBP9.27□□□□□ -0.93
KPNB1-210ENST00000580573 TCP10L2B9ZVM9 353 aa9.27□□□□□ -0.93
KPNB1-210ENST00000580573 H7C1D1 291 aa9.27□□□□□ -0.93
KPNB1-210ENST00000580573 CPLX1O14810 134 aa9.27□□□□□ -0.93
KPNB1-210ENST00000580573 GRIN3BO60391 1043 aa9.27□□□□□ -0.93
KPNB1-210ENST00000580573 BAG4O95429 457 aaKnown RBP9.27□□□□□ -0.93
KPNB1-210ENST00000580573 TTLL1O95922 423 aa9.27□□□□□ -0.93
KPNB1-210ENST00000580573 SLURP2P0DP57 97 aa9.27□□□□□ -0.93
KPNB1-210ENST00000580573 TNNI2P48788 182 aa9.27□□□□□ -0.93
KPNB1-210ENST00000580573 RRP1BQ14684 758 aaKnown RBP9.27□□□□□ -0.93
KPNB1-210ENST00000580573 C9orf131Q5VYM1 1079 aa9.27□□□□□ -0.93
KPNB1-210ENST00000580573 TMEM179Q6ZVK1 233 aa9.27□□□□□ -0.93
KPNB1-210ENST00000580573 CDC37L1Q7L3B6 337 aa9.27□□□□□ -0.93
KPNB1-210ENST00000580573 RAB11FIP4Q86YS3 637 aa9.27□□□□□ -0.93
KPNB1-210ENST00000580573 SIAH1Q8IUQ4 282 aa9.27□□□□□ -0.93
KPNB1-210ENST00000580573 CDAN1Q8IWY9 1227 aa9.27□□□□□ -0.93
KPNB1-210ENST00000580573 FAM177A1Q8N128 213 aaPredicted RBP9.27□□□□□ -0.93
KPNB1-210ENST00000580573 FBXO18Q8NFZ0 1043 aa9.27□□□□□ -0.93
KPNB1-210ENST00000580573 TRPM4Q8TD43 1214 aa9.27□□□□□ -0.93
KPNB1-210ENST00000580573 TMEM39BQ9GZU3 492 aa9.27□□□□□ -0.93
KPNB1-210ENST00000580573 KAT14Q9H8E8 782 aa9.27□□□□□ -0.93
KPNB1-210ENST00000580573 NYAP2Q9P242 653 aa9.27□□□□□ -0.93
KPNB1-210ENST00000580573 ORC3Q9UBD5 711 aaPredicted RBP9.27□□□□□ -0.93
KPNB1-210ENST00000580573 MAD2L2Q9UI95 211 aa9.27□□□□□ -0.93
KPNB1-210ENST00000580573 PPP2R3BQ9Y5P8 575 aa9.27□□□□□ -0.93
KPNB1-210ENST00000580573 GJA3Q9Y6H8 435 aa9.27□□□□□ -0.93
KPNB1-210ENST00000580573 PHF20L1A8MW92 1017 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms