RNA–Protein interactions for RNA: ENST00000579658.5

CDH19-204, Transcript of cadherin 19, humanhuman

TSL 1 (best)

Gene CDH19, Length 2,588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-204ENST00000579658 C9orf50Q5SZB4 431 aa4.16□□□□□ -1.74
CDH19-204ENST00000579658 SLC39A5Q6ZMH5 540 aa4.16□□□□□ -1.74
CDH19-204ENST00000579658 ITPRIPQ8IWB1 547 aa4.16□□□□□ -1.74
CDH19-204ENST00000579658 USP6NLQ92738 828 aa4.16□□□□□ -1.74
CDH19-204ENST00000579658 BADQ92934 168 aa4.16□□□□□ -1.74
CDH19-204ENST00000579658 KIF12Q96FN5 646 aa4.16□□□□□ -1.74
CDH19-204ENST00000579658 MS4A3Q96HJ5 214 aa4.16□□□□□ -1.74
CDH19-204ENST00000579658 OSBPL5Q9H0X9 879 aaPredicted RBP4.16□□□□□ -1.74
CDH19-204ENST00000579658 PDLIM7Q9NR12 457 aa4.16□□□□□ -1.74
CDH19-204ENST00000579658 NRBP1Q9UHY1 535 aa4.16□□□□□ -1.74
CDH19-204ENST00000579658 PA2G4Q9UQ80 394 aaKnown RBP4.16□□□□□ -1.74
CDH19-204ENST00000579658 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.16□□□□□ -1.74
CDH19-204ENST00000579658 AOX1Q06278 1338 aa4.16□□□□□ -1.74
CDH19-204ENST00000579658 TBC1D12O60347 775 aa4.16□□□□□ -1.74
CDH19-204ENST00000579658 TAF5LO75529 589 aa4.16□□□□□ -1.74
CDH19-204ENST00000579658 SLC5A1P13866 664 aa4.16□□□□□ -1.74
CDH19-204ENST00000579658 KLRK1P26718 216 aa4.16□□□□□ -1.74
CDH19-204ENST00000579658 RFX5P48382 616 aaPredicted RBP4.16□□□□□ -1.74
CDH19-204ENST00000579658 CCNA1P78396 465 aa4.16□□□□□ -1.74
CDH19-204ENST00000579658 NHLH1Q02575 133 aa4.16□□□□□ -1.74
CDH19-204ENST00000579658 KCNA1Q09470 495 aa4.16□□□□□ -1.74
CDH19-204ENST00000579658 IFIT5Q13325 482 aaKnown RBP4.16□□□□□ -1.74
CDH19-204ENST00000579658 LRRC24Q50LG9 513 aa4.16□□□□□ -1.74
CDH19-204ENST00000579658 PSRC1Q6PGN9 363 aaPredicted RBP4.16□□□□□ -1.74
CDH19-204ENST00000579658 ERMP1Q7Z2K6 904 aa4.16□□□□□ -1.74
CDH19-204ENST00000579658 GPRC5AQ8NFJ5 357 aa4.16□□□□□ -1.74
CDH19-204ENST00000579658 ATP11BQ9Y2G3 1177 aa4.16□□□□□ -1.74
CDH19-204ENST00000579658 ZHX2Q9Y6X8 837 aa4.16□□□□□ -1.74
CDH19-204ENST00000579658 DOCK3Q8IZD9 2030 aa4.16□□□□□ -1.74
CDH19-204ENST00000579658 ATRNL1Q5VV63 1379 aa4.16□□□□□ -1.74
CDH19-204ENST00000579658 ROBO3Q96MS0 1386 aa4.16□□□□□ -1.74
CDH19-204ENST00000579658 MROH7Q68CQ1 1323 aa4.15□□□□□ -1.74
CDH19-204ENST00000579658 PNMA6EA0A0J9YXQ4 647 aa4.15□□□□□ -1.74
CDH19-204ENST00000579658 SLC15A5A6NIM6 579 aa4.15□□□□□ -1.74
CDH19-204ENST00000579658 CLTBP09497 229 aa4.15□□□□□ -1.74
CDH19-204ENST00000579658 UBTFL1P0CB47 393 aaPredicted RBP4.15□□□□□ -1.74
CDH19-204ENST00000579658 RFX1P22670 979 aa4.15□□□□□ -1.74
CDH19-204ENST00000579658 HOXA7P31268 230 aaPredicted RBP4.15□□□□□ -1.74
CDH19-204ENST00000579658 PUS10Q3MIT2 529 aaKnown RBP4.15□□□□□ -1.74
CDH19-204ENST00000579658 RABL6Q3YEC7 729 aaPredicted RBP4.15□□□□□ -1.74
CDH19-204ENST00000579658 CAVIN4Q5BKX8 364 aa4.15□□□□□ -1.74
CDH19-204ENST00000579658 MORN1Q5T089 497 aa4.15□□□□□ -1.74
CDH19-204ENST00000579658 IER5LQ5T953 404 aa4.15□□□□□ -1.74
CDH19-204ENST00000579658 PLEKHH3Q7Z736 793 aa4.15□□□□□ -1.74
CDH19-204ENST00000579658 FTSJ3Q8IY81 847 aaKnown RBP4.15□□□□□ -1.74
CDH19-204ENST00000579658 GLMNQ92990 594 aa4.15□□□□□ -1.74
CDH19-204ENST00000579658 TOX2Q96NM4 488 aa4.15□□□□□ -1.74
CDH19-204ENST00000579658 SEZ6LQ9BYH1 1024 aa4.15□□□□□ -1.74
CDH19-204ENST00000579658 BACH2Q9BYV9 841 aa4.15□□□□□ -1.74
CDH19-204ENST00000579658 PLXNA1Q9UIW2 1896 aa4.15□□□□□ -1.74
CDH19-204ENST00000579658 A0A0G2JMZ2 1700 aa4.15□□□□□ -1.75
CDH19-204ENST00000579658 MROH5Q6ZUA9 1318 aa4.15□□□□□ -1.75
CDH19-204ENST00000579658 PHF20L1A8MW92 1017 aa4.15□□□□□ -1.75
CDH19-204ENST00000579658 HOXC6P09630 235 aa4.15□□□□□ -1.75
CDH19-204ENST00000579658 CYP2B6P20813 491 aa4.15□□□□□ -1.75
CDH19-204ENST00000579658 DSG2Q14126 1118 aa4.15□□□□□ -1.75
CDH19-204ENST00000579658 MVPQ14764 893 aaKnown RBP4.15□□□□□ -1.75
CDH19-204ENST00000579658 CSPP1Q1MSJ5 1256 aa4.15□□□□□ -1.75
CDH19-204ENST00000579658 RASIP1Q5U651 963 aa4.15□□□□□ -1.75
CDH19-204ENST00000579658 APOBEC3HQ6NTF7 200 aaKnown RBP4.15□□□□□ -1.75
CDH19-204ENST00000579658 POTEEQ6S8J3 1075 aa4.15□□□□□ -1.75
CDH19-204ENST00000579658 SND1Q7KZF4 910 aaKnown RBP eCLIP4.15□□□□□ -1.75
CDH19-204ENST00000579658 CCAR1Q8IX12 1150 aaKnown RBP4.15□□□□□ -1.75
CDH19-204ENST00000579658 SLF2Q8IX21 1173 aa4.15□□□□□ -1.75
CDH19-204ENST00000579658 EXOC6Q8TAG9 804 aa4.15□□□□□ -1.75
CDH19-204ENST00000579658 WDR66Q8TBY9 1149 aa4.15□□□□□ -1.75
CDH19-204ENST00000579658 CRBNQ96SW2 442 aa4.15□□□□□ -1.75
CDH19-204ENST00000579658 IDI2Q9BXS1 227 aa4.15□□□□□ -1.75
CDH19-204ENST00000579658 SIL1Q9H173 461 aa4.15□□□□□ -1.75
CDH19-204ENST00000579658 EPHX3Q9H6B9 360 aa4.15□□□□□ -1.75
CDH19-204ENST00000579658 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.15□□□□□ -1.75
CDH19-204ENST00000579658 PRDM5Q9NQX1 630 aaPredicted RBP4.15□□□□□ -1.75
CDH19-204ENST00000579658 SLC5A4Q9NY91 659 aa4.15□□□□□ -1.75
CDH19-204ENST00000579658 C19orf81C9J6K1 198 aa4.14□□□□□ -1.75
CDH19-204ENST00000579658 RAG1P15918 1043 aa4.14□□□□□ -1.75
CDH19-204ENST00000579658 PTPN5P54829 565 aa4.14□□□□□ -1.75
CDH19-204ENST00000579658 IRX3P78415 501 aaPredicted RBP4.14□□□□□ -1.75
CDH19-204ENST00000579658 TRIM32Q13049 653 aa4.14□□□□□ -1.75
CDH19-204ENST00000579658 OLFML2BQ68BL8 750 aa4.14□□□□□ -1.75
CDH19-204ENST00000579658 FAM43BQ6ZT52 329 aaPredicted RBP4.14□□□□□ -1.75
CDH19-204ENST00000579658 VPS37DQ86XT2 251 aa4.14□□□□□ -1.75
CDH19-204ENST00000579658 SIRT2Q8IXJ6 389 aa4.14□□□□□ -1.75
CDH19-204ENST00000579658 NLRP7Q8WX94 980 aa4.14□□□□□ -1.75
CDH19-204ENST00000579658 CALR3Q96L12 384 aaKnown RBP4.14□□□□□ -1.75
CDH19-204ENST00000579658 MFSD14AQ96MC6 490 aa4.14□□□□□ -1.75
CDH19-204ENST00000579658 NAP1L5Q96NT1 182 aaPredicted RBP4.14□□□□□ -1.75
CDH19-204ENST00000579658 KCNG1Q9UIX4 513 aa4.14□□□□□ -1.75
CDH19-204ENST00000579658 PHF24Q9UPV7 400 aa4.14□□□□□ -1.75
CDH19-204ENST00000579658 COL11A1P12107 1806 aaPredicted RBP4.14□□□□□ -1.75
CDH19-204ENST00000579658 TLL1O43897 1013 aa4.14□□□□□ -1.75
CDH19-204ENST00000579658 CCND3P30281 292 aaPredicted RBP4.14□□□□□ -1.75
CDH19-204ENST00000579658 CCDC57Q2TAC2 916 aa4.14□□□□□ -1.75
CDH19-204ENST00000579658 TRIM60Q495X7 471 aa4.14□□□□□ -1.75
CDH19-204ENST00000579658 LDHAL6AQ6ZMR3 332 aa4.14□□□□□ -1.75
CDH19-204ENST00000579658 MIGA2Q7L4E1 593 aa4.14□□□□□ -1.75
CDH19-204ENST00000579658 ATG9AQ7Z3C6 839 aa4.14□□□□□ -1.75
CDH19-204ENST00000579658 FBXO33Q7Z6M2 555 aa4.14□□□□□ -1.75
CDH19-204ENST00000579658 ZNF280CQ8ND82 737 aa4.14□□□□□ -1.75
CDH19-204ENST00000579658 MARVELD3Q96A59 401 aa4.14□□□□□ -1.75
CDH19-204ENST00000579658 TSEN34Q9BSV6 310 aaKnown RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms