RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 TFCP2Q12800 502 aa16.24■□□□□ 0.19
CDK5RAP3-213ENST00000579605 SKIV2LQ15477 1246 aaKnown RBP16.24■□□□□ 0.19
CDK5RAP3-213ENST00000579605 C16orf59Q7L2K0 433 aa16.24■□□□□ 0.19
CDK5RAP3-213ENST00000579605 METTL16Q86W50 562 aaKnown RBP16.24■□□□□ 0.19
CDK5RAP3-213ENST00000579605 NKX2-4Q9H2Z4 354 aa16.24■□□□□ 0.19
CDK5RAP3-213ENST00000579605 MRS2Q9HD23 443 aa16.24■□□□□ 0.19
CDK5RAP3-213ENST00000579605 MSRAQ9UJ68 235 aa16.24■□□□□ 0.19
CDK5RAP3-213ENST00000579605 FLT1P17948 1338 aa16.23■□□□□ 0.19
CDK5RAP3-213ENST00000579605 STRNO43815 780 aa16.23■□□□□ 0.19
CDK5RAP3-213ENST00000579605 TIMP1P01033 207 aa16.23■□□□□ 0.19
CDK5RAP3-213ENST00000579605 HLA-DOAP06340 250 aa16.23■□□□□ 0.19
CDK5RAP3-213ENST00000579605 ERCC3P19447 782 aa16.23■□□□□ 0.19
CDK5RAP3-213ENST00000579605 USP14P54578 494 aa16.23■□□□□ 0.19
CDK5RAP3-213ENST00000579605 PLS1Q14651 629 aa16.23■□□□□ 0.19
CDK5RAP3-213ENST00000579605 TMEM31Q5JXX7 168 aa16.23■□□□□ 0.19
CDK5RAP3-213ENST00000579605 TMEM240Q5SV17 173 aa16.23■□□□□ 0.19
CDK5RAP3-213ENST00000579605 SLC5A4Q9NY91 659 aa16.23■□□□□ 0.19
CDK5RAP3-213ENST00000579605 CXXC1Q9P0U4 656 aaPredicted RBP16.23■□□□□ 0.19
CDK5RAP3-213ENST00000579605 ARIH1Q9Y4X5 557 aaPredicted RBP16.23■□□□□ 0.19
CDK5RAP3-213ENST00000579605 PTPRCP08575 1304 aa16.22■□□□□ 0.19
CDK5RAP3-213ENST00000579605 APBB1O00213 710 aa16.22■□□□□ 0.19
CDK5RAP3-213ENST00000579605 NAA16Q6N069 864 aaPredicted RBP16.22■□□□□ 0.19
CDK5RAP3-213ENST00000579605 MFSD5Q6N075 450 aa16.22■□□□□ 0.19
CDK5RAP3-213ENST00000579605 LBX2Q6XYB7 198 aa16.22■□□□□ 0.19
CDK5RAP3-213ENST00000579605 ZNF365Q70YC5 407 aa16.22■□□□□ 0.19
CDK5RAP3-213ENST00000579605 NCAPG2Q86XI2 1143 aa16.22■□□□□ 0.19
CDK5RAP3-213ENST00000579605 AKAP2Q9Y2D5 859 aa16.22■□□□□ 0.19
CDK5RAP3-213ENST00000579605 ANP32CO43423 234 aa16.21■□□□□ 0.19
CDK5RAP3-213ENST00000579605 CSF2RAP15509 400 aa16.21■□□□□ 0.19
CDK5RAP3-213ENST00000579605 PPIGQ13427 754 aaKnown RBP eCLIP16.21■□□□□ 0.194e-9■■■■□ 24.8
CDK5RAP3-213ENST00000579605 CCDC174Q6PII3 467 aa16.21■□□□□ 0.19
CDK5RAP3-213ENST00000579605 SAMD1Q6SPF0 538 aaPredicted RBP16.21■□□□□ 0.19
CDK5RAP3-213ENST00000579605 ATF7IPQ6VMQ6 1270 aa16.21■□□□□ 0.19
CDK5RAP3-213ENST00000579605 LENG1Q96BZ8 264 aaPredicted RBP16.21■□□□□ 0.19
CDK5RAP3-213ENST00000579605 MAML3Q96JK9 1138 aa16.21■□□□□ 0.19
CDK5RAP3-213ENST00000579605 SPATC1LQ9H0A9 340 aa16.21■□□□□ 0.19
CDK5RAP3-213ENST00000579605 KIAA1683Q9H0B3 1180 aa16.21■□□□□ 0.19
CDK5RAP3-213ENST00000579605 SLC28A3Q9HAS3 691 aa16.21■□□□□ 0.19
CDK5RAP3-213ENST00000579605 COPRSQ9NQ92 184 aa16.21■□□□□ 0.19
CDK5RAP3-213ENST00000579605 STARD7Q9NQZ5 370 aa16.21■□□□□ 0.19
CDK5RAP3-213ENST00000579605 SNRKQ9NRH2 765 aa16.21■□□□□ 0.19
CDK5RAP3-213ENST00000579605 FAM86C2PA6NEL3 165 aa16.2■□□□□ 0.18
CDK5RAP3-213ENST00000579605 PLCG2P16885 1265 aa16.2■□□□□ 0.18
CDK5RAP3-213ENST00000579605 TAL1P17542 331 aaPredicted RBP16.2■□□□□ 0.18
CDK5RAP3-213ENST00000579605 RAB30Q15771 203 aa16.2■□□□□ 0.18
CDK5RAP3-213ENST00000579605 AAK1Q2M2I8 961 aa16.2■□□□□ 0.18
CDK5RAP3-213ENST00000579605 ANKRD33Q7Z3H0 272 aa16.2■□□□□ 0.18
CDK5RAP3-213ENST00000579605 TOX2Q96NM4 488 aa16.2■□□□□ 0.18
CDK5RAP3-213ENST00000579605 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.2■□□□□ 0.18
CDK5RAP3-213ENST00000579605 BDP1A6H8Y1 2624 aa16.19■□□□□ 0.18
CDK5RAP3-213ENST00000579605 DYNLL1P63167 89 aaKnown RBP16.19■□□□□ 0.18
CDK5RAP3-213ENST00000579605 COG2Q14746 738 aa16.19■□□□□ 0.18
CDK5RAP3-213ENST00000579605 ABCB5Q2M3G0 1257 aa16.19■□□□□ 0.18
CDK5RAP3-213ENST00000579605 ADGRA1Q86SQ6 560 aa16.19■□□□□ 0.18
CDK5RAP3-213ENST00000579605 PPP1R12CQ9BZL4 782 aa16.19■□□□□ 0.18
CDK5RAP3-213ENST00000579605 TANGO6Q9C0B7 1094 aa16.19■□□□□ 0.18
CDK5RAP3-213ENST00000579605 HOXC10Q9NYD6 342 aa16.19■□□□□ 0.18
CDK5RAP3-213ENST00000579605 YBX2Q9Y2T7 364 aaKnown RBP16.19■□□□□ 0.18
CDK5RAP3-213ENST00000579605 MCAMP43121 646 aa16.18■□□□□ 0.18
CDK5RAP3-213ENST00000579605 ACLYP53396 1101 aa16.18■□□□□ 0.18
CDK5RAP3-213ENST00000579605 PPP4CP60510 307 aa16.18■□□□□ 0.18
CDK5RAP3-213ENST00000579605 CERKLQ49MI3 558 aaPredicted RBP16.18■□□□□ 0.18
CDK5RAP3-213ENST00000579605 RASIP1Q5U651 963 aa16.18■□□□□ 0.18
CDK5RAP3-213ENST00000579605 TMEM199Q8N511 208 aa16.18■□□□□ 0.18
CDK5RAP3-213ENST00000579605 NUP133Q8WUM0 1156 aa16.18■□□□□ 0.18
CDK5RAP3-213ENST00000579605 SSH1Q8WYL5 1049 aa16.18■□□□□ 0.18
CDK5RAP3-213ENST00000579605 VTI1AQ96AJ9 217 aa16.18■□□□□ 0.18
CDK5RAP3-213ENST00000579605 CDCA7LQ96GN5 454 aa16.18■□□□□ 0.18
CDK5RAP3-213ENST00000579605 CABP5Q9NP86 173 aa16.18■□□□□ 0.18
CDK5RAP3-213ENST00000579605 TBX21Q9UL17 535 aa16.18■□□□□ 0.18
CDK5RAP3-213ENST00000579605 TCF20Q9UGU0 1960 aaKnown RBP16.18■□□□□ 0.18
CDK5RAP3-213ENST00000579605 PGK2P07205 417 aa16.17■□□□□ 0.18
CDK5RAP3-213ENST00000579605 FCER1AP12319 257 aa16.17■□□□□ 0.18
CDK5RAP3-213ENST00000579605 TATDN1Q6P1N9 297 aa16.17■□□□□ 0.18
CDK5RAP3-213ENST00000579605 SHCBP1Q8NEM2 672 aa16.17■□□□□ 0.18
CDK5RAP3-213ENST00000579605 MROH8Q9H579 483 aa16.17■□□□□ 0.18
CDK5RAP3-213ENST00000579605 SIPA1L1O43166 1804 aa16.17■□□□□ 0.18
CDK5RAP3-213ENST00000579605 ARID4AP29374 1257 aaPredicted RBP16.16■□□□□ 0.18
CDK5RAP3-213ENST00000579605 RABGGTBP53611 331 aa16.16■□□□□ 0.18
CDK5RAP3-213ENST00000579605 KCNA10Q16322 511 aa16.16■□□□□ 0.18
CDK5RAP3-213ENST00000579605 PSRC1Q6PGN9 363 aaPredicted RBP16.16■□□□□ 0.18
CDK5RAP3-213ENST00000579605 XIRP2A4UGR9 3374 aa16.16■□□□□ 0.18
CDK5RAP3-213ENST00000579605 RFXAPO00287 272 aa16.15■□□□□ 0.18
CDK5RAP3-213ENST00000579605 ADAMTS4O75173 837 aa16.15■□□□□ 0.18
CDK5RAP3-213ENST00000579605 AKR1A1P14550 325 aa16.15■□□□□ 0.18
CDK5RAP3-213ENST00000579605 CYP2C18P33260 490 aa16.15■□□□□ 0.18
CDK5RAP3-213ENST00000579605 USP5P45974 858 aa16.15■□□□□ 0.18
CDK5RAP3-213ENST00000579605 SEPT2Q15019 361 aa16.15■□□□□ 0.18
CDK5RAP3-213ENST00000579605 OTOP2Q7RTS6 562 aa16.15■□□□□ 0.18
CDK5RAP3-213ENST00000579605 ABRAQ8N0Z2 381 aa16.15■□□□□ 0.18
CDK5RAP3-213ENST00000579605 KHSRPQ92945 711 aaKnown RBP eCLIP16.15■□□□□ 0.187e-8■■□□□ 13.1
CDK5RAP3-213ENST00000579605 MMP19Q99542 508 aa16.15■□□□□ 0.18
CDK5RAP3-213ENST00000579605 TINF2Q9BSI4 451 aa16.15■□□□□ 0.18
CDK5RAP3-213ENST00000579605 TSEN34Q9BSV6 310 aaKnown RBP16.15■□□□□ 0.18
CDK5RAP3-213ENST00000579605 PLXNA1Q9UIW2 1896 aa16.14■□□□□ 0.17
CDK5RAP3-213ENST00000579605 ERC2O15083 957 aa16.14■□□□□ 0.17
CDK5RAP3-213ENST00000579605 FGBP02675 491 aa16.14■□□□□ 0.17
CDK5RAP3-213ENST00000579605 UQCRFS1P1P0C7P4 283 aa16.14■□□□□ 0.17
CDK5RAP3-213ENST00000579605 ZNF865P0CJ78 1059 aaPredicted RBP16.14■□□□□ 0.17
CDK5RAP3-213ENST00000579605 MYOGP15173 224 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms