RNA–Protein interactions for RNA: ENST00000579449.1

TSEN54-206, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-206ENST00000579449 PPP1R12BO60237 982 aaPredicted RBP16.18■□□□□ 0.18
TSEN54-206ENST00000579449 CTDNEP1O95476 244 aa16.18■□□□□ 0.18
TSEN54-206ENST00000579449 SCYL3Q8IZE3 742 aa16.18■□□□□ 0.18
TSEN54-206ENST00000579449 NSUN7Q8NE18 718 aaKnown RBP16.18■□□□□ 0.18
TSEN54-206ENST00000579449 LLPHQ9BRT6 129 aaKnown RBP16.18■□□□□ 0.18
TSEN54-206ENST00000579449 SMC3Q9UQE7 1217 aa16.18■□□□□ 0.18
TSEN54-206ENST00000579449 PAPPA2Q9BXP8 1791 aa16.18■□□□□ 0.18
TSEN54-206ENST00000579449 MYH6P13533 1939 aa16.17■□□□□ 0.18
TSEN54-206ENST00000579449 TRAF5O00463 557 aa16.17■□□□□ 0.18
TSEN54-206ENST00000579449 CPLX1O14810 134 aa16.17■□□□□ 0.18
TSEN54-206ENST00000579449 DHX16O60231 1041 aaKnown RBP16.17■□□□□ 0.18
TSEN54-206ENST00000579449 JAK2O60674 1132 aa16.17■□□□□ 0.18
TSEN54-206ENST00000579449 GRM4Q14833 912 aa16.17■□□□□ 0.18
TSEN54-206ENST00000579449 PPP2R5BQ15173 497 aa16.17■□□□□ 0.18
TSEN54-206ENST00000579449 CCDC84Q86UT8 332 aaPredicted RBP16.17■□□□□ 0.18
TSEN54-206ENST00000579449 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.17■□□□□ 0.18
TSEN54-206ENST00000579449 CTCFLQ8NI51 663 aaPredicted RBP16.17■□□□□ 0.18
TSEN54-206ENST00000579449 ZKSCAN4Q969J2 545 aaPredicted RBP16.17■□□□□ 0.18
TSEN54-206ENST00000579449 MAP3K14Q99558 947 aa16.17■□□□□ 0.18
TSEN54-206ENST00000579449 ARHGEF10LQ9HCE6 1279 aa16.17■□□□□ 0.18
TSEN54-206ENST00000579449 CWC22Q9HCG8 908 aaKnown RBP16.17■□□□□ 0.18
TSEN54-206ENST00000579449 RBM28Q9NW13 759 aaKnown RBP16.17■□□□□ 0.18
TSEN54-206ENST00000579449 PHIPQ8WWQ0 1821 aa16.17■□□□□ 0.18
TSEN54-206ENST00000579449 BAZ2BQ9UIF8 2168 aaKnown RBP16.16■□□□□ 0.18
TSEN54-206ENST00000579449 CCDC196A0A1B0GTZ2 297 aa16.16■□□□□ 0.18
TSEN54-206ENST00000579449 A0A1W2PRG0 241 aa16.16■□□□□ 0.18
TSEN54-206ENST00000579449 USP17L5A8MUK1 530 aa16.16■□□□□ 0.18
TSEN54-206ENST00000579449 GJB2P29033 226 aa16.16■□□□□ 0.18
TSEN54-206ENST00000579449 IREB2P48200 963 aaKnown RBP16.16■□□□□ 0.18
TSEN54-206ENST00000579449 MAP3K9P80192 1104 aa16.16■□□□□ 0.18
TSEN54-206ENST00000579449 FMR1Q06787 632 aaKnown RBP eCLIP16.16■□□□□ 0.18
TSEN54-206ENST00000579449 NOL9Q5SY16 702 aaKnown RBP16.16■□□□□ 0.18
TSEN54-206ENST00000579449 CPLX2Q6PUV4 134 aaKnown RBP16.16■□□□□ 0.18
TSEN54-206ENST00000579449 RASGRP2Q7LDG7 609 aa16.16■□□□□ 0.18
TSEN54-206ENST00000579449 SMARCC2Q8TAQ2 1214 aa16.16■□□□□ 0.18
TSEN54-206ENST00000579449 ACER1Q8TDN7 264 aa16.16■□□□□ 0.18
TSEN54-206ENST00000579449 MAD2L2Q9UI95 211 aa16.16■□□□□ 0.18
TSEN54-206ENST00000579449 PTPDC1A2A3K4 754 aa16.15■□□□□ 0.18
TSEN54-206ENST00000579449 PPFIA3O75145 1194 aa16.15■□□□□ 0.18
TSEN54-206ENST00000579449 PDHBP11177 359 aa16.15■□□□□ 0.18
TSEN54-206ENST00000579449 KIF5BP33176 963 aa16.15■□□□□ 0.18
TSEN54-206ENST00000579449 ECE1P42892 770 aa16.15■□□□□ 0.18
TSEN54-206ENST00000579449 TTLL12Q14166 644 aaPredicted RBP16.15■□□□□ 0.18
TSEN54-206ENST00000579449 NTRK3Q16288 839 aa16.15■□□□□ 0.18
TSEN54-206ENST00000579449 USP17L2Q6R6M4 530 aa16.15■□□□□ 0.18
TSEN54-206ENST00000579449 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.15■□□□□ 0.18
TSEN54-206ENST00000579449 MOB2Q70IA6 237 aa16.15■□□□□ 0.18
TSEN54-206ENST00000579449 STAG2Q8N3U4 1231 aa16.15■□□□□ 0.18
TSEN54-206ENST00000579449 GPBP1L1Q9HC44 474 aaPredicted RBP16.15■□□□□ 0.18
TSEN54-206ENST00000579449 PICK1Q9NRD5 415 aa16.15■□□□□ 0.18
TSEN54-206ENST00000579449 SYNPO2Q9UMS6 1093 aa16.15■□□□□ 0.18
TSEN54-206ENST00000579449 TMX2Q9Y320 296 aa16.15■□□□□ 0.18
TSEN54-206ENST00000579449 TRPM7Q96QT4 1865 aa16.14■□□□□ 0.17
TSEN54-206ENST00000579449 PALM3A6NDB9 673 aaPredicted RBP16.14■□□□□ 0.17
TSEN54-206ENST00000579449 RAD21O60216 631 aa16.14■□□□□ 0.17
TSEN54-206ENST00000579449 CDKL5O76039 1030 aa16.14■□□□□ 0.17
TSEN54-206ENST00000579449 PLEKHA8P1O95397 391 aa16.14■□□□□ 0.17
TSEN54-206ENST00000579449 PARP1P09874 1014 aaKnown RBP16.14■□□□□ 0.17
TSEN54-206ENST00000579449 SNHG28P0DPA3 235 aa16.14■□□□□ 0.17
TSEN54-206ENST00000579449 IFNAR1P17181 557 aa16.14■□□□□ 0.17
TSEN54-206ENST00000579449 PTPRAP18433 802 aa16.14■□□□□ 0.17
TSEN54-206ENST00000579449 DDIT3P35638 169 aa16.14■□□□□ 0.17
TSEN54-206ENST00000579449 MAP3K11Q16584 847 aa16.14■□□□□ 0.17
TSEN54-206ENST00000579449 SLFN13Q68D06 897 aa16.14■□□□□ 0.17
TSEN54-206ENST00000579449 CHADLQ6NUI6 762 aa16.14■□□□□ 0.17
TSEN54-206ENST00000579449 TMTC3Q6ZXV5 915 aa16.14■□□□□ 0.17
TSEN54-206ENST00000579449 ARMC9Q7Z3E5 817 aa16.14■□□□□ 0.17
TSEN54-206ENST00000579449 CMTR1Q8N1G2 835 aaKnown RBP16.14■□□□□ 0.17
TSEN54-206ENST00000579449 GMCL1P1Q8NEA9 526 aa16.14■□□□□ 0.17
TSEN54-206ENST00000579449 DDX11Q96FC9 970 aa16.14■□□□□ 0.17
TSEN54-206ENST00000579449 ZNF408Q9H9D4 720 aa16.14■□□□□ 0.17
TSEN54-206ENST00000579449 F5H6K3 240 aa16.13■□□□□ 0.17
TSEN54-206ENST00000579449 GOLGA8HP0CJ92 632 aa16.13■□□□□ 0.17
TSEN54-206ENST00000579449 GNAQP50148 359 aa16.13■□□□□ 0.17
TSEN54-206ENST00000579449 HMGN5P82970 282 aaKnown RBP16.13■□□□□ 0.17
TSEN54-206ENST00000579449 KLRC3Q07444 240 aa16.13■□□□□ 0.17
TSEN54-206ENST00000579449 SSRP1Q08945 709 aaKnown RBP16.13■□□□□ 0.17
TSEN54-206ENST00000579449 VGLL4Q14135 290 aa16.13■□□□□ 0.17
TSEN54-206ENST00000579449 ASPRV1Q53RT3 343 aa16.13■□□□□ 0.17
TSEN54-206ENST00000579449 CCDC82Q8N4S0 544 aa16.13■□□□□ 0.17
TSEN54-206ENST00000579449 SRBD1Q8N5C6 995 aaKnown RBP16.13■□□□□ 0.17
TSEN54-206ENST00000579449 DCAF4Q8WV16 495 aa16.13■□□□□ 0.17
TSEN54-206ENST00000579449 PHKBQ93100 1093 aa16.13■□□□□ 0.17
TSEN54-206ENST00000579449 SH2D4AQ9H788 454 aa16.13■□□□□ 0.17
TSEN54-206ENST00000579449 GOPCQ9HD26 462 aa16.13■□□□□ 0.17
TSEN54-206ENST00000579449 ORC3Q9UBD5 711 aaPredicted RBP16.13■□□□□ 0.17
TSEN54-206ENST00000579449 CSADQ9Y600 493 aa16.13■□□□□ 0.17
TSEN54-206ENST00000579449 SNCAIPQ9Y6H5 919 aa16.13■□□□□ 0.17
TSEN54-206ENST00000579449 FRMPD2Q68DX3 1309 aaPredicted RBP16.13■□□□□ 0.17
TSEN54-206ENST00000579449 NDUFB10O96000 172 aa16.12■□□□□ 0.17
TSEN54-206ENST00000579449 ZNF543Q08ER8 600 aa16.12■□□□□ 0.17
TSEN54-206ENST00000579449 FUT2Q10981 343 aa16.12■□□□□ 0.17
TSEN54-206ENST00000579449 ZYXQ15942 572 aaKnown RBP16.12■□□□□ 0.17
TSEN54-206ENST00000579449 CCDC96Q2M329 555 aa16.12■□□□□ 0.17
TSEN54-206ENST00000579449 KIAA1755Q5JYT7 1200 aa16.12■□□□□ 0.17
TSEN54-206ENST00000579449 NBPF11Q86T75 865 aa16.12■□□□□ 0.17
TSEN54-206ENST00000579449 ANKRD13AQ8IZ07 590 aa16.12■□□□□ 0.17
TSEN54-206ENST00000579449 FEZ1Q99689 392 aa16.12■□□□□ 0.17
TSEN54-206ENST00000579449 WDR18Q9BV38 432 aa16.12■□□□□ 0.17
TSEN54-206ENST00000579449 SLC26A6Q9BXS9 759 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms