RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 MAP2K5Q13163 448 aa11.07□□□□□ -0.64
CDK5RAP3-211ENST00000578996 PLS1Q14651 629 aa11.07□□□□□ -0.64
CDK5RAP3-211ENST00000578996 MORN1Q5T089 497 aa11.07□□□□□ -0.64
CDK5RAP3-211ENST00000578996 C7orf61Q8IZ16 206 aa11.07□□□□□ -0.64
CDK5RAP3-211ENST00000578996 ANKLE1Q8NAG6 615 aa11.07□□□□□ -0.64
CDK5RAP3-211ENST00000578996 PCDH10Q9P2E7 1040 aa11.07□□□□□ -0.64
CDK5RAP3-211ENST00000578996 RBM27Q9P2N5 1060 aaKnown RBP11.07□□□□□ -0.64
CDK5RAP3-211ENST00000578996 FLOT1O75955 427 aa11.06□□□□□ -0.64
CDK5RAP3-211ENST00000578996 PTPREP23469 700 aa11.06□□□□□ -0.64
CDK5RAP3-211ENST00000578996 COG2Q14746 738 aa11.06□□□□□ -0.64
CDK5RAP3-211ENST00000578996 MAP3K21Q5TCX8 1036 aa11.06□□□□□ -0.64
CDK5RAP3-211ENST00000578996 C12orf60Q5U649 245 aa11.06□□□□□ -0.64
CDK5RAP3-211ENST00000578996 LBX2Q6XYB7 198 aa11.06□□□□□ -0.64
CDK5RAP3-211ENST00000578996 USP6NLQ92738 828 aa11.06□□□□□ -0.64
CDK5RAP3-211ENST00000578996 NBPF3Q9H094 633 aa11.06□□□□□ -0.64
CDK5RAP3-211ENST00000578996 C11orf49Q9H6J7 331 aa11.06□□□□□ -0.64
CDK5RAP3-211ENST00000578996 SH2D4AQ9H788 454 aa11.06□□□□□ -0.64
CDK5RAP3-211ENST00000578996 ARPP21Q9UBL0 812 aaPredicted RBP11.06□□□□□ -0.64
CDK5RAP3-211ENST00000578996 DOCK3Q8IZD9 2030 aa11.06□□□□□ -0.64
CDK5RAP3-211ENST00000578996 SLC15A5A6NIM6 579 aa11.05□□□□□ -0.64
CDK5RAP3-211ENST00000578996 MINDY4BA8MYZ0 360 aa11.05□□□□□ -0.64
CDK5RAP3-211ENST00000578996 CNGA1P29973 690 aa11.05□□□□□ -0.64
CDK5RAP3-211ENST00000578996 KIAA1755Q5JYT7 1200 aa11.05□□□□□ -0.64
CDK5RAP3-211ENST00000578996 MFSD14CQ5VZR4 134 aa11.05□□□□□ -0.64
CDK5RAP3-211ENST00000578996 CTR9Q6PD62 1173 aa11.05□□□□□ -0.64
CDK5RAP3-211ENST00000578996 C16orf86Q6ZW13 317 aa11.05□□□□□ -0.64
CDK5RAP3-211ENST00000578996 DPP9Q86TI2 863 aa11.05□□□□□ -0.64
CDK5RAP3-211ENST00000578996 KBTBD3Q8NAB2 608 aa11.05□□□□□ -0.64
CDK5RAP3-211ENST00000578996 LPAR1Q92633 364 aa11.05□□□□□ -0.64
CDK5RAP3-211ENST00000578996 CCDC17Q96LX7 622 aa11.05□□□□□ -0.64
CDK5RAP3-211ENST00000578996 MOV10L1Q9BXT6 1211 aaKnown RBP11.05□□□□□ -0.64
CDK5RAP3-211ENST00000578996 DCTPP1Q9H773 170 aa11.05□□□□□ -0.64
CDK5RAP3-211ENST00000578996 VCPKMTQ9H867 229 aa11.05□□□□□ -0.64
CDK5RAP3-211ENST00000578996 HOXC10Q9NYD6 342 aa11.05□□□□□ -0.64
CDK5RAP3-211ENST00000578996 FLRT1Q9NZU1 646 aa11.05□□□□□ -0.64
CDK5RAP3-211ENST00000578996 TMX2Q9Y320 296 aa11.05□□□□□ -0.64
CDK5RAP3-211ENST00000578996 BAZ2AQ9UIF9 1905 aaKnown RBP11.04□□□□□ -0.64
CDK5RAP3-211ENST00000578996 APPP05067 770 aa11.04□□□□□ -0.64
CDK5RAP3-211ENST00000578996 EEF2P13639 858 aaKnown RBP11.04□□□□□ -0.64
CDK5RAP3-211ENST00000578996 TDO2P48775 406 aa11.04□□□□□ -0.64
CDK5RAP3-211ENST00000578996 GRB14Q14449 540 aa11.04□□□□□ -0.64
CDK5RAP3-211ENST00000578996 NCAPG2Q86XI2 1143 aa11.04□□□□□ -0.64
CDK5RAP3-211ENST00000578996 NPLOC4Q8TAT6 608 aa11.04□□□□□ -0.64
CDK5RAP3-211ENST00000578996 APPBP2Q92624 585 aa11.04□□□□□ -0.64
CDK5RAP3-211ENST00000578996 ATG4CQ96DT6 458 aa11.04□□□□□ -0.64
CDK5RAP3-211ENST00000578996 SPATC1LQ9H0A9 340 aa11.04□□□□□ -0.64
CDK5RAP3-211ENST00000578996 MKNK2Q9HBH9 465 aa11.04□□□□□ -0.64
CDK5RAP3-211ENST00000578996 OGDHLQ9ULD0 1010 aa11.04□□□□□ -0.64
CDK5RAP3-211ENST00000578996 ZMYND8Q9ULU4 1186 aaPredicted RBP11.04□□□□□ -0.64
CDK5RAP3-211ENST00000578996 WDR46O15213 610 aaKnown RBP11.03□□□□□ -0.64
CDK5RAP3-211ENST00000578996 RNF113AO15541 343 aaKnown RBP11.03□□□□□ -0.64
CDK5RAP3-211ENST00000578996 GPAA1O43292 621 aa11.03□□□□□ -0.64
CDK5RAP3-211ENST00000578996 SYN1P17600 705 aa11.03□□□□□ -0.64
CDK5RAP3-211ENST00000578996 ERCC3P19447 782 aa11.03□□□□□ -0.64
CDK5RAP3-211ENST00000578996 ADORA2AP29274 412 aa11.03□□□□□ -0.64
CDK5RAP3-211ENST00000578996 DSG3P32926 999 aa11.03□□□□□ -0.64
CDK5RAP3-211ENST00000578996 CYP2C19P33261 490 aa11.03□□□□□ -0.64
CDK5RAP3-211ENST00000578996 MNX1P50219 401 aaPredicted RBP11.03□□□□□ -0.64
CDK5RAP3-211ENST00000578996 SIAH1Q8IUQ4 282 aa11.03□□□□□ -0.64
CDK5RAP3-211ENST00000578996 OSBP2Q969R2 916 aa11.03□□□□□ -0.64
CDK5RAP3-211ENST00000578996 STRBPQ96SI9 672 aaKnown RBP11.03□□□□□ -0.64
CDK5RAP3-211ENST00000578996 KANSL2Q9H9L4 492 aa11.03□□□□□ -0.64
CDK5RAP3-211ENST00000578996 GOPCQ9HD26 462 aa11.03□□□□□ -0.64
CDK5RAP3-211ENST00000578996 ZBTB47Q9UFB7 747 aaPredicted RBP11.03□□□□□ -0.64
CDK5RAP3-211ENST00000578996 STAP2Q9UGK3 403 aa11.03□□□□□ -0.64
CDK5RAP3-211ENST00000578996 MYH7P12883 1935 aa11.03□□□□□ -0.64
CDK5RAP3-211ENST00000578996 MYH8P13535 1937 aa11.03□□□□□ -0.64
CDK5RAP3-211ENST00000578996 GSG1L2A8MUP6 293 aa11.02□□□□□ -0.65
CDK5RAP3-211ENST00000578996 M0R2C6 588 aa11.02□□□□□ -0.65
CDK5RAP3-211ENST00000578996 ERC2O15083 957 aa11.02□□□□□ -0.65
CDK5RAP3-211ENST00000578996 MYCNP04198 464 aaPredicted RBP11.02□□□□□ -0.65
CDK5RAP3-211ENST00000578996 RRP1P56182 461 aaKnown RBP11.02□□□□□ -0.65
CDK5RAP3-211ENST00000578996 LRRFIP1Q32MZ4 808 aaKnown RBP11.02□□□□□ -0.65
CDK5RAP3-211ENST00000578996 LHX8Q68G74 356 aa11.02□□□□□ -0.65
CDK5RAP3-211ENST00000578996 MB21D1Q8N884 522 aa11.02□□□□□ -0.65
CDK5RAP3-211ENST00000578996 YTHDC1Q96MU7 727 aaKnown RBP11.02□□□□□ -0.65
CDK5RAP3-211ENST00000578996 FSD1Q9BTV5 496 aa11.02□□□□□ -0.65
CDK5RAP3-211ENST00000578996 FBXO28Q9NVF7 368 aa11.02□□□□□ -0.65
CDK5RAP3-211ENST00000578996 DDX20Q9UHI6 824 aaKnown RBP11.02□□□□□ -0.65
CDK5RAP3-211ENST00000578996 PCDHB15Q9Y5E8 787 aa11.02□□□□□ -0.65
CDK5RAP3-211ENST00000578996 PFASO15067 1338 aa11.02□□□□□ -0.65
CDK5RAP3-211ENST00000578996 STRNO43815 780 aa11.01□□□□□ -0.65
CDK5RAP3-211ENST00000578996 ZFYP08048 801 aaPredicted RBP11.01□□□□□ -0.65
CDK5RAP3-211ENST00000578996 HOXC6P09630 235 aa11.01□□□□□ -0.65
CDK5RAP3-211ENST00000578996 GNAT2P19087 354 aa11.01□□□□□ -0.65
CDK5RAP3-211ENST00000578996 SBK1Q52WX2 424 aa11.01□□□□□ -0.65
CDK5RAP3-211ENST00000578996 FAM83BQ5T0W9 1011 aa11.01□□□□□ -0.65
CDK5RAP3-211ENST00000578996 ANO1Q5XXA6 986 aa11.01□□□□□ -0.65
CDK5RAP3-211ENST00000578996 SHCBP1Q8NEM2 672 aa11.01□□□□□ -0.65
CDK5RAP3-211ENST00000578996 OTUD7AQ8TE49 926 aaPredicted RBP11.01□□□□□ -0.65
CDK5RAP3-211ENST00000578996 MROH8Q9H579 483 aa11.01□□□□□ -0.65
CDK5RAP3-211ENST00000578996 EPB41L4AQ9HCS5 686 aaPredicted RBP11.01□□□□□ -0.65
CDK5RAP3-211ENST00000578996 SLC5A4Q9NY91 659 aa11.01□□□□□ -0.65
CDK5RAP3-211ENST00000578996 TTC41PQ6P2S7 1318 aa11.01□□□□□ -0.65
CDK5RAP3-211ENST00000578996 A0A0G2JMZ2 1700 aa11.01□□□□□ -0.65
CDK5RAP3-211ENST00000578996 MSCO60682 206 aa11□□□□□ -0.65
CDK5RAP3-211ENST00000578996 PRDM1O75626 825 aa11□□□□□ -0.65
CDK5RAP3-211ENST00000578996 FCER1AP12319 257 aa11□□□□□ -0.65
CDK5RAP3-211ENST00000578996 RASA1P20936 1047 aa11□□□□□ -0.65
CDK5RAP3-211ENST00000578996 SLC4A3P48751 1232 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms