RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 PLCD1P51178 756 aa10.66□□□□□ -0.7
CDK5RAP3-208ENST00000578525 ST5P78524 1137 aa10.66□□□□□ -0.7
CDK5RAP3-208ENST00000578525 GPSM2P81274 684 aa10.66□□□□□ -0.7
CDK5RAP3-208ENST00000578525 ATP2C1P98194 919 aaPredicted RBP10.66□□□□□ -0.7
CDK5RAP3-208ENST00000578525 TFAP4Q01664 338 aa10.66□□□□□ -0.7
CDK5RAP3-208ENST00000578525 PTPN14Q15678 1187 aa10.66□□□□□ -0.7
CDK5RAP3-208ENST00000578525 ZNF174Q15697 407 aa10.66□□□□□ -0.7
CDK5RAP3-208ENST00000578525 NYAP1Q6ZVC0 841 aa10.66□□□□□ -0.7
CDK5RAP3-208ENST00000578525 VSTM4Q8IW00 320 aa10.66□□□□□ -0.7
CDK5RAP3-208ENST00000578525 CCDC112Q8NEF3 446 aa10.66□□□□□ -0.7
CDK5RAP3-208ENST00000578525 ENOX1Q8TC92 643 aaKnown RBP10.66□□□□□ -0.7
CDK5RAP3-208ENST00000578525 DPF2Q92785 391 aa10.66□□□□□ -0.7
CDK5RAP3-208ENST00000578525 DHX58Q96C10 678 aa10.66□□□□□ -0.7
CDK5RAP3-208ENST00000578525 RBM17Q96I25 401 aaKnown RBP10.66□□□□□ -0.7
CDK5RAP3-208ENST00000578525 PYM1Q9BRP8 204 aaKnown RBP10.66□□□□□ -0.7
CDK5RAP3-208ENST00000578525 BCL11BQ9C0K0 894 aaPredicted RBP10.66□□□□□ -0.7
CDK5RAP3-208ENST00000578525 SH3GLB2Q9NR46 395 aa10.66□□□□□ -0.7
CDK5RAP3-208ENST00000578525 FANCLQ9NW38 375 aa10.66□□□□□ -0.7
CDK5RAP3-208ENST00000578525 DDX60LQ5H9U9 1706 aaKnown RBP10.66□□□□□ -0.7
CDK5RAP3-208ENST00000578525 LRRC37AA6NMS7 1700 aa10.65□□□□□ -0.7
CDK5RAP3-208ENST00000578525 UFL1O94874 794 aa10.65□□□□□ -0.7
CDK5RAP3-208ENST00000578525 SLFN14P0C7P3 912 aa10.65□□□□□ -0.7
CDK5RAP3-208ENST00000578525 ERCC5P28715 1186 aaPredicted RBP10.65□□□□□ -0.7
CDK5RAP3-208ENST00000578525 SYCP1Q15431 976 aa10.65□□□□□ -0.7
CDK5RAP3-208ENST00000578525 CFAP100Q494V2 611 aa10.65□□□□□ -0.7
CDK5RAP3-208ENST00000578525 CRY2Q49AN0 593 aa10.65□□□□□ -0.7
CDK5RAP3-208ENST00000578525 NOM1Q5C9Z4 860 aaKnown RBP10.65□□□□□ -0.7
CDK5RAP3-208ENST00000578525 MEX3CQ5U5Q3 659 aaKnown RBP10.65□□□□□ -0.7
CDK5RAP3-208ENST00000578525 USP49Q70CQ1 688 aa10.65□□□□□ -0.7
CDK5RAP3-208ENST00000578525 GRAMD1CQ8IYS0 662 aa10.65□□□□□ -0.7
CDK5RAP3-208ENST00000578525 PDILTQ8N807 584 aa10.65□□□□□ -0.7
CDK5RAP3-208ENST00000578525 PNMA1Q8ND90 353 aa10.65□□□□□ -0.7
CDK5RAP3-208ENST00000578525 SPATA20Q8TB22 786 aa10.65□□□□□ -0.7
CDK5RAP3-208ENST00000578525 SYMPKQ92797 1274 aaKnown RBP10.65□□□□□ -0.7
CDK5RAP3-208ENST00000578525 DYNLL2Q96FJ2 89 aa10.65□□□□□ -0.7
CDK5RAP3-208ENST00000578525 RTFDC1Q9BY42 306 aaPredicted RBP10.65□□□□□ -0.7
CDK5RAP3-208ENST00000578525 MKNK2Q9HBH9 465 aa10.65□□□□□ -0.7
CDK5RAP3-208ENST00000578525 GGA1Q9UJY5 639 aa10.65□□□□□ -0.7
CDK5RAP3-208ENST00000578525 A0A087X0B3 334 aa10.64□□□□□ -0.71
CDK5RAP3-208ENST00000578525 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.64□□□□□ -0.71
CDK5RAP3-208ENST00000578525 WNT7AO00755 349 aa10.64□□□□□ -0.71
CDK5RAP3-208ENST00000578525 CCP110O43303 1012 aa10.64□□□□□ -0.71
CDK5RAP3-208ENST00000578525 ONECUT3O60422 494 aaPredicted RBP10.64□□□□□ -0.71
CDK5RAP3-208ENST00000578525 SERPINB2P05120 415 aa10.64□□□□□ -0.71
CDK5RAP3-208ENST00000578525 TSPY3P0CV98 308 aa10.64□□□□□ -0.71
CDK5RAP3-208ENST00000578525 TSPY8P0CW00 308 aa10.64□□□□□ -0.71
CDK5RAP3-208ENST00000578525 TOP1P11387 765 aaKnown RBP10.64□□□□□ -0.71
CDK5RAP3-208ENST00000578525 IL1R1P14778 569 aa10.64□□□□□ -0.71
CDK5RAP3-208ENST00000578525 PLCG2P16885 1265 aa10.64□□□□□ -0.71
CDK5RAP3-208ENST00000578525 ZNF18P17022 549 aa10.64□□□□□ -0.71
CDK5RAP3-208ENST00000578525 BTDP43251 543 aa10.64□□□□□ -0.71
CDK5RAP3-208ENST00000578525 FMR1Q06787 632 aaKnown RBP eCLIP10.64□□□□□ -0.71
CDK5RAP3-208ENST00000578525 DIXDC1Q155Q3 683 aa10.64□□□□□ -0.71
CDK5RAP3-208ENST00000578525 GRIK5Q16478 980 aa10.64□□□□□ -0.71
CDK5RAP3-208ENST00000578525 E4F1Q66K89 784 aaPredicted RBP10.64□□□□□ -0.71
CDK5RAP3-208ENST00000578525 PIK3AP1Q6ZUJ8 805 aa10.64□□□□□ -0.71
CDK5RAP3-208ENST00000578525 SLC51AQ86UW1 340 aa10.64□□□□□ -0.71
CDK5RAP3-208ENST00000578525 BLIDQ8IZY5 108 aa10.64□□□□□ -0.71
CDK5RAP3-208ENST00000578525 ZNF444Q8N0Y2 327 aaPredicted RBP10.64□□□□□ -0.71
CDK5RAP3-208ENST00000578525 FAM177A1Q8N128 213 aaPredicted RBP10.64□□□□□ -0.71
CDK5RAP3-208ENST00000578525 ZNF710Q8N1W2 664 aa10.64□□□□□ -0.71
CDK5RAP3-208ENST00000578525 DAGLBQ8NCG7 672 aa10.64□□□□□ -0.71
CDK5RAP3-208ENST00000578525 TGFBRAP1Q8WUH2 860 aa10.64□□□□□ -0.71
CDK5RAP3-208ENST00000578525 TSC1Q92574 1164 aa10.64□□□□□ -0.71
CDK5RAP3-208ENST00000578525 PAGE5Q96GU1 130 aa10.64□□□□□ -0.71
CDK5RAP3-208ENST00000578525 EPSTI1Q96J88 318 aa10.64□□□□□ -0.71
CDK5RAP3-208ENST00000578525 GPR101Q96P66 508 aaPredicted RBP10.64□□□□□ -0.71
CDK5RAP3-208ENST00000578525 LZTS2Q9BRK4 669 aa10.64□□□□□ -0.71
CDK5RAP3-208ENST00000578525 ZNF287Q9HBT7 754 aa10.64□□□□□ -0.71
CDK5RAP3-208ENST00000578525 CD209Q9NNX6 404 aa10.64□□□□□ -0.71
CDK5RAP3-208ENST00000578525 IL17RBQ9NRM6 502 aa10.64□□□□□ -0.71
CDK5RAP3-208ENST00000578525 AFF2P51816 1311 aa10.63□□□□□ -0.71
CDK5RAP3-208ENST00000578525 GPR75-ASB3A0A0A6YYF3 556 aa10.63□□□□□ -0.71
CDK5RAP3-208ENST00000578525 TMEM232C9JQI7 657 aa10.63□□□□□ -0.71
CDK5RAP3-208ENST00000578525 TUBB4AP04350 444 aa10.63□□□□□ -0.71
CDK5RAP3-208ENST00000578525 GYS1P13807 737 aa10.63□□□□□ -0.71
CDK5RAP3-208ENST00000578525 RASA1P20936 1047 aa10.63□□□□□ -0.71
CDK5RAP3-208ENST00000578525 DPYDQ12882 1025 aa10.63□□□□□ -0.71
CDK5RAP3-208ENST00000578525 PTGDRQ13258 359 aa10.63□□□□□ -0.71
CDK5RAP3-208ENST00000578525 ZNF827Q17R98 1081 aa10.63□□□□□ -0.71
CDK5RAP3-208ENST00000578525 SLC4A8Q2Y0W8 1093 aa10.63□□□□□ -0.71
CDK5RAP3-208ENST00000578525 GALNT17Q6IS24 598 aa10.63□□□□□ -0.71
CDK5RAP3-208ENST00000578525 FCHSD1Q86WN1 690 aa10.63□□□□□ -0.71
CDK5RAP3-208ENST00000578525 MAPKAPK5Q8IW41 473 aa10.63□□□□□ -0.71
CDK5RAP3-208ENST00000578525 SLF2Q8IX21 1173 aa10.63□□□□□ -0.71
CDK5RAP3-208ENST00000578525 SEPT12Q8IYM1 358 aa10.63□□□□□ -0.71
CDK5RAP3-208ENST00000578525 CCDC148Q8NFR7 591 aa10.63□□□□□ -0.71
CDK5RAP3-208ENST00000578525 ANKRD7Q92527 254 aa10.63□□□□□ -0.71
CDK5RAP3-208ENST00000578525 PPP1R13BQ96KQ4 1090 aa10.63□□□□□ -0.71
CDK5RAP3-208ENST00000578525 GSDMAQ96QA5 445 aa10.63□□□□□ -0.71
CDK5RAP3-208ENST00000578525 CRAMP1Q96RY5 1269 aa10.63□□□□□ -0.71
CDK5RAP3-208ENST00000578525 LRRC4BQ9NT99 713 aa10.63□□□□□ -0.71
CDK5RAP3-208ENST00000578525 TRMT1Q9NXH9 659 aaKnown RBP10.63□□□□□ -0.71
CDK5RAP3-208ENST00000578525 PODXL2Q9NZ53 605 aa10.63□□□□□ -0.71
CDK5RAP3-208ENST00000578525 MAD2L2Q9UI95 211 aa10.63□□□□□ -0.71
CDK5RAP3-208ENST00000578525 PCDHA4Q9UN74 947 aa10.63□□□□□ -0.71
CDK5RAP3-208ENST00000578525 NFE2L3Q9Y4A8 694 aa10.63□□□□□ -0.71
CDK5RAP3-208ENST00000578525 SNED1Q8TER0 1413 aa10.63□□□□□ -0.71
CDK5RAP3-208ENST00000578525 CDK5RAP2Q96SN8 1893 aa10.63□□□□□ -0.71
CDK5RAP3-208ENST00000578525 VWA3AA6NCI4 1184 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms