RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-208ENST00000578501 ICA1Q05084 483 aa16.26■□□□□ 0.19
CSNK1D-208ENST00000578501 MTFR1Q15390 333 aa16.26■□□□□ 0.19
CSNK1D-208ENST00000578501 ZYXQ15942 572 aaKnown RBP16.26■□□□□ 0.19
CSNK1D-208ENST00000578501 CATSPERGQ6ZRH7 1159 aa16.26■□□□□ 0.19
CSNK1D-208ENST00000578501 RAET1EQ8TD07 263 aa16.26■□□□□ 0.19
CSNK1D-208ENST00000578501 LPAR1Q92633 364 aa16.26■□□□□ 0.19
CSNK1D-208ENST00000578501 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.26■□□□□ 0.19
CSNK1D-208ENST00000578501 MORF4L1Q9UBU8 362 aa16.26■□□□□ 0.19
CSNK1D-208ENST00000578501 SRRDQ9UH36 339 aa16.26■□□□□ 0.19
CSNK1D-208ENST00000578501 TMX2Q9Y320 296 aa16.26■□□□□ 0.19
CSNK1D-208ENST00000578501 GRK4P32298 578 aa16.25■□□□□ 0.19
CSNK1D-208ENST00000578501 MNX1P50219 401 aaPredicted RBP16.25■□□□□ 0.19
CSNK1D-208ENST00000578501 MFAP1P55081 439 aaKnown RBP16.25■□□□□ 0.19
CSNK1D-208ENST00000578501 UBXN2AP68543 259 aa16.25■□□□□ 0.19
CSNK1D-208ENST00000578501 PDE4BQ07343 736 aa16.25■□□□□ 0.19
CSNK1D-208ENST00000578501 PPARAQ07869 468 aa16.25■□□□□ 0.19
CSNK1D-208ENST00000578501 NMIQ13287 307 aaPredicted RBP16.25■□□□□ 0.19
CSNK1D-208ENST00000578501 ZNF444Q8N0Y2 327 aaPredicted RBP16.25■□□□□ 0.19
CSNK1D-208ENST00000578501 MYH8P13535 1937 aa16.25■□□□□ 0.19
CSNK1D-208ENST00000578501 VPS53Q5VIR6 699 aa16.24■□□□□ 0.19
CSNK1D-208ENST00000578501 LBX2Q6XYB7 198 aa16.24■□□□□ 0.19
CSNK1D-208ENST00000578501 UBE2Q1Q7Z7E8 422 aa16.24■□□□□ 0.19
CSNK1D-208ENST00000578501 ANAPC4Q9UJX5 808 aa16.24■□□□□ 0.19
CSNK1D-208ENST00000578501 ZMYM6O95789 1325 aa16.23■□□□□ 0.19
CSNK1D-208ENST00000578501 CCDC171Q6TFL3 1326 aa16.23■□□□□ 0.19
CSNK1D-208ENST00000578501 HSPD1P10809 573 aaKnown RBP16.23■□□□□ 0.19
CSNK1D-208ENST00000578501 CCL5P13501 91 aa16.23■□□□□ 0.19
CSNK1D-208ENST00000578501 EEF2P13639 858 aaKnown RBP16.23■□□□□ 0.19
CSNK1D-208ENST00000578501 TTC22Q5TAA0 569 aa16.23■□□□□ 0.19
CSNK1D-208ENST00000578501 ZNF589Q86UQ0 364 aaPredicted RBP16.23■□□□□ 0.19
CSNK1D-208ENST00000578501 GPRC5AQ8NFJ5 357 aa16.23■□□□□ 0.19
CSNK1D-208ENST00000578501 RNF208Q9H0X6 261 aa16.23■□□□□ 0.19
CSNK1D-208ENST00000578501 RPAP3Q9H6T3 665 aaPredicted RBP16.23■□□□□ 0.19
CSNK1D-208ENST00000578501 VCPKMTQ9H867 229 aa16.23■□□□□ 0.19
CSNK1D-208ENST00000578501 NYAP2Q9P242 653 aa16.23■□□□□ 0.19
CSNK1D-208ENST00000578501 RBPJLQ9UBG7 517 aa16.23■□□□□ 0.19
CSNK1D-208ENST00000578501 BIN2Q9UBW5 565 aaPredicted RBP16.23■□□□□ 0.19
CSNK1D-208ENST00000578501 MYPNQ86TC9 1320 aa16.22■□□□□ 0.19
CSNK1D-208ENST00000578501 ZSWIM8A7E2V4 1837 aa16.22■□□□□ 0.19
CSNK1D-208ENST00000578501 IGKV6D-41A0A0C4DH26 115 aa16.22■□□□□ 0.19
CSNK1D-208ENST00000578501 TNPO2O14787 897 aaKnown RBP16.22■□□□□ 0.19
CSNK1D-208ENST00000578501 FGAP02671 866 aa16.22■□□□□ 0.19
CSNK1D-208ENST00000578501 POTEEQ6S8J3 1075 aa16.22■□□□□ 0.19
CSNK1D-208ENST00000578501 CLEC10AQ8IUN9 316 aa16.22■□□□□ 0.19
CSNK1D-208ENST00000578501 STK11IPQ8N1F8 1099 aa16.22■□□□□ 0.19
CSNK1D-208ENST00000578501 TXNRD2Q9NNW7 524 aa16.22■□□□□ 0.19
CSNK1D-208ENST00000578501 DIAPH3Q9NSV4 1193 aa16.22■□□□□ 0.19
CSNK1D-208ENST00000578501 SYNPO2Q9UMS6 1093 aa16.22■□□□□ 0.19
CSNK1D-208ENST00000578501 RABGAP1Q9Y3P9 1069 aa16.22■□□□□ 0.19
CSNK1D-208ENST00000578501 PLIN4Q96Q06 1357 aa16.22■□□□□ 0.19
CSNK1D-208ENST00000578501 SZT2Q5T011 3432 aa16.22■□□□□ 0.19
CSNK1D-208ENST00000578501 GREB1LQ9C091 1923 aaPredicted RBP16.21■□□□□ 0.19
CSNK1D-208ENST00000578501 WDR46O15213 610 aaKnown RBP16.21■□□□□ 0.19
CSNK1D-208ENST00000578501 PRDM1O75626 825 aa16.21■□□□□ 0.19
CSNK1D-208ENST00000578501 FARP2O94887 1054 aaPredicted RBP16.21■□□□□ 0.19
CSNK1D-208ENST00000578501 FGRP09769 529 aa16.21■□□□□ 0.19
CSNK1D-208ENST00000578501 GSPT1P15170 499 aaKnown RBP16.21■□□□□ 0.19
CSNK1D-208ENST00000578501 ERVK-9P63128 1117 aa16.21■□□□□ 0.19
CSNK1D-208ENST00000578501 ERVK-24P63145 666 aa16.21■□□□□ 0.19
CSNK1D-208ENST00000578501 IRF5Q13568 498 aa16.21■□□□□ 0.19
CSNK1D-208ENST00000578501 COG2Q14746 738 aa16.21■□□□□ 0.19
CSNK1D-208ENST00000578501 KIAA1755Q5JYT7 1200 aa16.21■□□□□ 0.19
CSNK1D-208ENST00000578501 NEDD1Q8NHV4 660 aa16.21■□□□□ 0.19
CSNK1D-208ENST00000578501 U2AF1L4Q8WU68 220 aaKnown RBP16.21■□□□□ 0.19
CSNK1D-208ENST00000578501 COA7Q96BR5 231 aa16.21■□□□□ 0.19
CSNK1D-208ENST00000578501 GOPCQ9HD26 462 aa16.21■□□□□ 0.19
CSNK1D-208ENST00000578501 HOXC10Q9NYD6 342 aa16.21■□□□□ 0.19
CSNK1D-208ENST00000578501 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.21■□□□□ 0.19
CSNK1D-208ENST00000578501 MGAMO43451 1857 aa16.2■□□□□ 0.18
CSNK1D-208ENST00000578501 EVI5O60447 810 aa16.2■□□□□ 0.18
CSNK1D-208ENST00000578501 ECM2O94769 699 aaPredicted RBP16.2■□□□□ 0.18
CSNK1D-208ENST00000578501 PRKCZQ05513 592 aa16.2■□□□□ 0.18
CSNK1D-208ENST00000578501 GPR153Q6NV75 609 aa16.2■□□□□ 0.18
CSNK1D-208ENST00000578501 CWC27Q6UX04 472 aaKnown RBP16.2■□□□□ 0.18
CSNK1D-208ENST00000578501 CENPQQ7L2Z9 268 aaPredicted RBP16.2■□□□□ 0.18
CSNK1D-208ENST00000578501 MKL1Q969V6 931 aa16.2■□□□□ 0.18
CSNK1D-208ENST00000578501 MTMR4Q9NYA4 1195 aa16.2■□□□□ 0.18
CSNK1D-208ENST00000578501 SPDYE16A6NNV3 312 aaPredicted RBP16.19■□□□□ 0.18
CSNK1D-208ENST00000578501 SGPL1O95470 568 aa16.19■□□□□ 0.18
CSNK1D-208ENST00000578501 TSPY3P0CV98 308 aa16.19■□□□□ 0.18
CSNK1D-208ENST00000578501 TSPY8P0CW00 308 aa16.19■□□□□ 0.18
CSNK1D-208ENST00000578501 PCP11498 1178 aaKnown RBP16.19■□□□□ 0.18
CSNK1D-208ENST00000578501 MAPK4P31152 587 aa16.19■□□□□ 0.18
CSNK1D-208ENST00000578501 FLT3LGP49771 235 aa16.19■□□□□ 0.18
CSNK1D-208ENST00000578501 TFAP4Q01664 338 aa16.19■□□□□ 0.18
CSNK1D-208ENST00000578501 ATP2B2Q01814 1243 aa16.19■□□□□ 0.18
CSNK1D-208ENST00000578501 Q3C1V9 767 aa16.19■□□□□ 0.18
CSNK1D-208ENST00000578501 PPP4R3BQ5MIZ7 849 aa16.19■□□□□ 0.18
CSNK1D-208ENST00000578501 SLAIN1Q8ND83 568 aa16.19■□□□□ 0.18
CSNK1D-208ENST00000578501 PXYLP1Q8TE99 480 aa16.19■□□□□ 0.18
CSNK1D-208ENST00000578501 CEP95Q96GE4 821 aa16.19■□□□□ 0.18
CSNK1D-208ENST00000578501 TANGO6Q9C0B7 1094 aa16.19■□□□□ 0.18
CSNK1D-208ENST00000578501 GABRQQ9UN88 632 aa16.19■□□□□ 0.18
CSNK1D-208ENST00000578501 ORC4O43929 436 aa16.18■□□□□ 0.18
CSNK1D-208ENST00000578501 CNMDO75829 334 aa16.18■□□□□ 0.18
CSNK1D-208ENST00000578501 TTLL1O95922 423 aa16.18■□□□□ 0.18
CSNK1D-208ENST00000578501 CCNA1P78396 465 aa16.18■□□□□ 0.18
CSNK1D-208ENST00000578501 CTDSPL2Q05D32 466 aa16.18■□□□□ 0.18
CSNK1D-208ENST00000578501 SPICE1Q8N0Z3 855 aa16.18■□□□□ 0.18
CSNK1D-208ENST00000578501 MB21D1Q8N884 522 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms