RNA–Protein interactions for RNA: ENST00000578367.1

LINC01543-201, Transcript of long intergenic non-protein coding RNA 1543, humanhuman

TSL 5 BASIC

Gene LINC01543, Length 900 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01543-201ENST00000578367 SH2B2O14492 632 aaPredicted RBP16.27■□□□□ 0.2
LINC01543-201ENST00000578367 GJA5P36382 358 aa16.27■□□□□ 0.2
LINC01543-201ENST00000578367 PABPC4Q13310 644 aaKnown RBP eCLIP16.27■□□□□ 0.2
LINC01543-201ENST00000578367 ANKRD1Q15327 319 aa16.27■□□□□ 0.2
LINC01543-201ENST00000578367 SHROOM1Q2M3G4 852 aaPredicted RBP16.27■□□□□ 0.2
LINC01543-201ENST00000578367 ACER1Q8TDN7 264 aa16.27■□□□□ 0.2
LINC01543-201ENST00000578367 TMEM47Q9BQJ4 181 aa16.27■□□□□ 0.2
LINC01543-201ENST00000578367 KAT14Q9H8E8 782 aa16.27■□□□□ 0.2
LINC01543-201ENST00000578367 DOCK1Q14185 1865 aa16.27■□□□□ 0.19
LINC01543-201ENST00000578367 WDR33Q9C0J8 1336 aaKnown RBP16.26■□□□□ 0.19
LINC01543-201ENST00000578367 GREB1LQ9C091 1923 aaPredicted RBP16.26■□□□□ 0.19
LINC01543-201ENST00000578367 A0A1W2PRG0 241 aa16.26■□□□□ 0.19
LINC01543-201ENST00000578367 NMT2O60551 498 aa16.26■□□□□ 0.19
LINC01543-201ENST00000578367 TM4SF4P48230 202 aa16.26■□□□□ 0.19
LINC01543-201ENST00000578367 MTMR2Q13614 643 aa16.26■□□□□ 0.19
LINC01543-201ENST00000578367 RABEP1Q15276 862 aa16.26■□□□□ 0.19
LINC01543-201ENST00000578367 OTUD7BQ6GQQ9 843 aa16.26■□□□□ 0.19
LINC01543-201ENST00000578367 CNKSR2Q8WXI2 1034 aa16.26■□□□□ 0.19
LINC01543-201ENST00000578367 GMCL1Q96IK5 515 aa16.26■□□□□ 0.19
LINC01543-201ENST00000578367 F5H6K3 240 aa16.25■□□□□ 0.19
LINC01543-201ENST00000578367 WDR46O15213 610 aaKnown RBP16.25■□□□□ 0.19
LINC01543-201ENST00000578367 ALDH1A1P00352 501 aa16.25■□□□□ 0.19
LINC01543-201ENST00000578367 CALM1P0DP23 149 aa16.25■□□□□ 0.19
LINC01543-201ENST00000578367 CALM2P0DP24 149 aa16.25■□□□□ 0.19
LINC01543-201ENST00000578367 CALM3P0DP25 149 aa16.25■□□□□ 0.19
LINC01543-201ENST00000578367 HOXA7P31268 230 aaPredicted RBP16.25■□□□□ 0.19
LINC01543-201ENST00000578367 EVCP57679 992 aa16.25■□□□□ 0.19
LINC01543-201ENST00000578367 FGD1P98174 961 aa16.25■□□□□ 0.19
LINC01543-201ENST00000578367 ATP2B2Q01814 1243 aa16.25■□□□□ 0.19
LINC01543-201ENST00000578367 KLRC3Q07444 240 aa16.25■□□□□ 0.19
LINC01543-201ENST00000578367 PPP2R5BQ15173 497 aa16.25■□□□□ 0.19
LINC01543-201ENST00000578367 CYP4F22Q6NT55 531 aa16.25■□□□□ 0.19
LINC01543-201ENST00000578367 PAXIP1Q6ZW49 1069 aaPredicted RBP16.25■□□□□ 0.19
LINC01543-201ENST00000578367 CATIPQ7Z7H3 387 aa16.25■□□□□ 0.19
LINC01543-201ENST00000578367 ANKRD23Q86SG2 305 aa16.25■□□□□ 0.19
LINC01543-201ENST00000578367 PNMA1Q8ND90 353 aa16.25■□□□□ 0.19
LINC01543-201ENST00000578367 NKX2-3Q8TAU0 364 aa16.25■□□□□ 0.19
LINC01543-201ENST00000578367 DCAF4Q8WV16 495 aa16.25■□□□□ 0.19
LINC01543-201ENST00000578367 LY9Q9HBG7 655 aa16.25■□□□□ 0.19
LINC01543-201ENST00000578367 EMILIN3Q9NT22 766 aa16.25■□□□□ 0.19
LINC01543-201ENST00000578367 AGTPBP1Q9UPW5 1226 aa16.25■□□□□ 0.19
LINC01543-201ENST00000578367 CCL15-CCL14A0A0B4J2E2 113 aa16.24■□□□□ 0.19
LINC01543-201ENST00000578367 CCDC69A6NI79 296 aa16.24■□□□□ 0.19
LINC01543-201ENST00000578367 PLA2G6O60733 806 aa16.24■□□□□ 0.19
LINC01543-201ENST00000578367 DDAH1O94760 285 aa16.24■□□□□ 0.19
LINC01543-201ENST00000578367 SNHG28P0DPA3 235 aa16.24■□□□□ 0.19
LINC01543-201ENST00000578367 VEGFBP49765 207 aa16.24■□□□□ 0.19
LINC01543-201ENST00000578367 HMGCS2P54868 508 aa16.24■□□□□ 0.19
LINC01543-201ENST00000578367 CCL15Q16663 113 aa16.24■□□□□ 0.19
LINC01543-201ENST00000578367 GPATCH4Q5T3I0 446 aaKnown RBP16.24■□□□□ 0.19
LINC01543-201ENST00000578367 SYNE3Q6ZMZ3 975 aa16.24■□□□□ 0.19
LINC01543-201ENST00000578367 KIF2CQ99661 725 aa16.24■□□□□ 0.19
LINC01543-201ENST00000578367 ZKSCAN3Q9BRR0 538 aa16.24■□□□□ 0.19
LINC01543-201ENST00000578367 PDRG1Q9NUG6 133 aa16.24■□□□□ 0.19
LINC01543-201ENST00000578367 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.24■□□□□ 0.19
LINC01543-201ENST00000578367 OTOFQ9HC10 1997 aa16.24■□□□□ 0.19
LINC01543-201ENST00000578367 NDUFB10O96000 172 aa16.23■□□□□ 0.19
LINC01543-201ENST00000578367 MOGSQ13724 837 aa16.23■□□□□ 0.19
LINC01543-201ENST00000578367 SLFN13Q68D06 897 aa16.23■□□□□ 0.19
LINC01543-201ENST00000578367 CHST3Q7LGC8 479 aa16.23■□□□□ 0.19
LINC01543-201ENST00000578367 CCDC84Q86UT8 332 aaPredicted RBP16.23■□□□□ 0.19
LINC01543-201ENST00000578367 CLEC10AQ8IUN9 316 aa16.23■□□□□ 0.19
LINC01543-201ENST00000578367 GTF3C2Q8WUA4 911 aaPredicted RBP16.23■□□□□ 0.19
LINC01543-201ENST00000578367 PNMA3Q9UL41 463 aa16.23■□□□□ 0.19
LINC01543-201ENST00000578367 SLC12A7Q9Y666 1083 aa16.23■□□□□ 0.19
LINC01543-201ENST00000578367 MYPNQ86TC9 1320 aa16.22■□□□□ 0.19
LINC01543-201ENST00000578367 USP17L15C9J2P7 530 aa16.22■□□□□ 0.19
LINC01543-201ENST00000578367 USP17L13C9JLJ4 530 aa16.22■□□□□ 0.19
LINC01543-201ENST00000578367 USP17L11C9JVI0 530 aa16.22■□□□□ 0.19
LINC01543-201ENST00000578367 USP17L18D6R9N7 530 aa16.22■□□□□ 0.19
LINC01543-201ENST00000578367 USP17L22D6RA61 530 aa16.22■□□□□ 0.19
LINC01543-201ENST00000578367 USP17L17D6RBQ6 530 aa16.22■□□□□ 0.19
LINC01543-201ENST00000578367 USP17L19D6RCP7 530 aa16.22■□□□□ 0.19
LINC01543-201ENST00000578367 USP17L20D6RJB6 530 aa16.22■□□□□ 0.19
LINC01543-201ENST00000578367 FDX1P10109 184 aa16.22■□□□□ 0.19
LINC01543-201ENST00000578367 VCAM1P19320 739 aa16.22■□□□□ 0.19
LINC01543-201ENST00000578367 NEK4P51957 841 aa16.22■□□□□ 0.19
LINC01543-201ENST00000578367 KIF23Q02241 960 aaPredicted RBP16.22■□□□□ 0.19
LINC01543-201ENST00000578367 USP17L24Q0WX57 530 aa16.22■□□□□ 0.19
LINC01543-201ENST00000578367 TROAPQ12815 778 aa16.22■□□□□ 0.19
LINC01543-201ENST00000578367 ASPRV1Q53RT3 343 aa16.22■□□□□ 0.19
LINC01543-201ENST00000578367 NFXL1Q6ZNB6 911 aa16.22■□□□□ 0.19
LINC01543-201ENST00000578367 Q6ZUG5 572 aa16.22■□□□□ 0.19
LINC01543-201ENST00000578367 BRI3BPQ8WY22 251 aa16.22■□□□□ 0.19
LINC01543-201ENST00000578367 CHMP4CQ96CF2 233 aa16.22■□□□□ 0.19
LINC01543-201ENST00000578367 UPF3BQ9BZI7 483 aaKnown RBP16.22■□□□□ 0.19
LINC01543-201ENST00000578367 ST18O60284 1047 aa16.21■□□□□ 0.19
LINC01543-201ENST00000578367 PDHBP11177 359 aa16.21■□□□□ 0.19
LINC01543-201ENST00000578367 BMP3P12645 472 aa16.21■□□□□ 0.19
LINC01543-201ENST00000578367 KIF5BP33176 963 aa16.21■□□□□ 0.19
LINC01543-201ENST00000578367 SLC1A4P43007 532 aa16.21■□□□□ 0.19
LINC01543-201ENST00000578367 MCM2P49736 904 aa16.21■□□□□ 0.19
LINC01543-201ENST00000578367 GPAT2Q6NUI2 795 aa16.21■□□□□ 0.19
LINC01543-201ENST00000578367 CATSPERGQ6ZRH7 1159 aa16.21■□□□□ 0.19
LINC01543-201ENST00000578367 FAM160B2Q86V87 743 aa16.21■□□□□ 0.19
LINC01543-201ENST00000578367 LRRC47Q8N1G4 583 aaKnown RBP16.21■□□□□ 0.19
LINC01543-201ENST00000578367 CHURC1Q8WUH1 139 aa16.21■□□□□ 0.19
LINC01543-201ENST00000578367 ZNF274Q96GC6 653 aaPredicted RBP16.21■□□□□ 0.19
LINC01543-201ENST00000578367 HOXC10Q9NYD6 342 aa16.21■□□□□ 0.19
LINC01543-201ENST00000578367 FEM1BQ9UK73 627 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms