RNA–Protein interactions for RNA: ENST00000578357.5

CUEDC1-208, Transcript of CUE domain containing 1, humanhuman

TSL 3

Gene CUEDC1, Length 661 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-208ENST00000578357 SPATC1LQ9H0A9 340 aa12.14□□□□□ -0.47
CUEDC1-208ENST00000578357 CCDC8Q9H0W5 538 aaPredicted RBP12.14□□□□□ -0.47
CUEDC1-208ENST00000578357 PRDM5Q9NQX1 630 aaPredicted RBP12.14□□□□□ -0.47
CUEDC1-208ENST00000578357 DBNLQ9UJU6 430 aaKnown RBP12.14□□□□□ -0.47
CUEDC1-208ENST00000578357 NOP58Q9Y2X3 529 aaKnown RBP12.14□□□□□ -0.47
CUEDC1-208ENST00000578357 MPHOSPH10O00566 681 aaKnown RBP12.13□□□□□ -0.47
CUEDC1-208ENST00000578357 ERCC3P19447 782 aa12.13□□□□□ -0.47
CUEDC1-208ENST00000578357 SHMT1P34896 483 aa12.13□□□□□ -0.47
CUEDC1-208ENST00000578357 ADCYAP1R1P41586 468 aa12.13□□□□□ -0.47
CUEDC1-208ENST00000578357 SEPT2Q15019 361 aa12.13□□□□□ -0.47
CUEDC1-208ENST00000578357 C9orf50Q5SZB4 431 aa12.13□□□□□ -0.47
CUEDC1-208ENST00000578357 C1orf53Q5VUE5 145 aa12.13□□□□□ -0.47
CUEDC1-208ENST00000578357 ITPRIPQ8IWB1 547 aa12.13□□□□□ -0.47
CUEDC1-208ENST00000578357 ABRAQ8N0Z2 381 aa12.13□□□□□ -0.47
CUEDC1-208ENST00000578357 MAFAQ8NHW3 353 aaPredicted RBP12.13□□□□□ -0.47
CUEDC1-208ENST00000578357 MROH8Q9H579 483 aa12.13□□□□□ -0.47
CUEDC1-208ENST00000578357 TACC3Q9Y6A5 838 aa12.13□□□□□ -0.47
CUEDC1-208ENST00000578357 COBLO75128 1261 aa12.12□□□□□ -0.47
CUEDC1-208ENST00000578357 GUCY1A2P33402 732 aa12.12□□□□□ -0.47
CUEDC1-208ENST00000578357 PLS1Q14651 629 aa12.12□□□□□ -0.47
CUEDC1-208ENST00000578357 TRIM60Q495X7 471 aa12.12□□□□□ -0.47
CUEDC1-208ENST00000578357 ANO1Q5XXA6 986 aa12.12□□□□□ -0.47
CUEDC1-208ENST00000578357 SYMPKQ92797 1274 aaKnown RBP12.12□□□□□ -0.47
CUEDC1-208ENST00000578357 EAF2Q96CJ1 260 aaPredicted RBP12.12□□□□□ -0.47
CUEDC1-208ENST00000578357 TANGO6Q9C0B7 1094 aa12.12□□□□□ -0.47
CUEDC1-208ENST00000578357 VCANP13611 3396 aa12.12□□□□□ -0.47
CUEDC1-208ENST00000578357 SIPA1L1O43166 1804 aa12.11□□□□□ -0.47
CUEDC1-208ENST00000578357 CDK5RAP2Q96SN8 1893 aa12.11□□□□□ -0.47
CUEDC1-208ENST00000578357 MAST2Q6P0Q8 1798 aa12.11□□□□□ -0.47
CUEDC1-208ENST00000578357 MAGEB6P1A0A0J9YX57 407 aa12.11□□□□□ -0.47
CUEDC1-208ENST00000578357 A0A1W2PRG0 241 aa12.11□□□□□ -0.47
CUEDC1-208ENST00000578357 FCER1AP12319 257 aa12.11□□□□□ -0.47
CUEDC1-208ENST00000578357 DSG3P32926 999 aa12.11□□□□□ -0.47
CUEDC1-208ENST00000578357 GABPAQ06546 454 aa12.11□□□□□ -0.47
CUEDC1-208ENST00000578357 SNX17Q15036 470 aa12.11□□□□□ -0.47
CUEDC1-208ENST00000578357 LRRC41Q15345 812 aa12.11□□□□□ -0.47
CUEDC1-208ENST00000578357 TTF1Q15361 905 aaPredicted RBP12.11□□□□□ -0.47
CUEDC1-208ENST00000578357 PRAMEF19Q5SWL8 479 aa12.11□□□□□ -0.47
CUEDC1-208ENST00000578357 NCAPG2Q86XI2 1143 aa12.11□□□□□ -0.47
CUEDC1-208ENST00000578357 FTSJ3Q8IY81 847 aaKnown RBP12.11□□□□□ -0.47
CUEDC1-208ENST00000578357 FERMT2Q96AC1 680 aa12.11□□□□□ -0.47
CUEDC1-208ENST00000578357 RIOK1Q9BRS2 568 aaKnown RBP12.11□□□□□ -0.47
CUEDC1-208ENST00000578357 CRNKL1Q9BZJ0 848 aaKnown RBP12.11□□□□□ -0.47
CUEDC1-208ENST00000578357 ANTXR1Q9H6X2 564 aa12.11□□□□□ -0.47
CUEDC1-208ENST00000578357 MCM9Q9NXL9 1143 aa12.11□□□□□ -0.47
CUEDC1-208ENST00000578357 TLR7Q9NYK1 1049 aaKnown RBP12.11□□□□□ -0.47
CUEDC1-208ENST00000578357 TRIM43BA6NCK2 446 aa12.1□□□□□ -0.47
CUEDC1-208ENST00000578357 FLOT1O75955 427 aa12.1□□□□□ -0.47
CUEDC1-208ENST00000578357 SLC25A27O95847 323 aa12.1□□□□□ -0.47
CUEDC1-208ENST00000578357 TLE2Q04725 743 aa12.1□□□□□ -0.47
CUEDC1-208ENST00000578357 C20orf194Q5TEA3 1177 aa12.1□□□□□ -0.47
CUEDC1-208ENST00000578357 TMEM179Q6ZVK1 233 aa12.1□□□□□ -0.47
CUEDC1-208ENST00000578357 SH3RF1Q7Z6J0 888 aa12.1□□□□□ -0.47
CUEDC1-208ENST00000578357 RNF180Q86T96 592 aa12.1□□□□□ -0.47
CUEDC1-208ENST00000578357 MYLIPQ8WY64 445 aa12.1□□□□□ -0.47
CUEDC1-208ENST00000578357 TRIM43Q96BQ3 446 aaPredicted RBP12.1□□□□□ -0.47
CUEDC1-208ENST00000578357 TTYH1Q9H313 450 aaPredicted RBP12.1□□□□□ -0.47
CUEDC1-208ENST00000578357 SH2D4AQ9H788 454 aa12.1□□□□□ -0.47
CUEDC1-208ENST00000578357 PDLIM7Q9NR12 457 aa12.1□□□□□ -0.47
CUEDC1-208ENST00000578357 NRBP1Q9UHY1 535 aa12.1□□□□□ -0.47
CUEDC1-208ENST00000578357 TMEM265A0A087WTH1 108 aa12.09□□□□□ -0.47
CUEDC1-208ENST00000578357 RARBP10826 455 aa12.09□□□□□ -0.47
CUEDC1-208ENST00000578357 FOSL2P15408 326 aa12.09□□□□□ -0.47
CUEDC1-208ENST00000578357 SLC9C2Q5TAH2 1124 aa12.09□□□□□ -0.47
CUEDC1-208ENST00000578357 ERC1Q8IUD2 1116 aa12.09□□□□□ -0.47
CUEDC1-208ENST00000578357 MAML3Q96JK9 1138 aa12.09□□□□□ -0.47
CUEDC1-208ENST00000578357 YTHDC1Q96MU7 727 aaKnown RBP12.09□□□□□ -0.47
CUEDC1-208ENST00000578357 ARHGEF10LQ9HCE6 1279 aa12.09□□□□□ -0.47
CUEDC1-208ENST00000578357 XPNPEP3Q9NQH7 507 aa12.09□□□□□ -0.47
CUEDC1-208ENST00000578357 PRDM6Q9NQX0 595 aa12.09□□□□□ -0.47
CUEDC1-208ENST00000578357 SWAP70Q9UH65 585 aa12.09□□□□□ -0.47
CUEDC1-208ENST00000578357 PHF24Q9UPV7 400 aa12.09□□□□□ -0.47
CUEDC1-208ENST00000578357 TMX2Q9Y320 296 aa12.09□□□□□ -0.47
CUEDC1-208ENST00000578357 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.08□□□□□ -0.48
CUEDC1-208ENST00000578357 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.08□□□□□ -0.48
CUEDC1-208ENST00000578357 CLTBP09497 229 aa12.08□□□□□ -0.48
CUEDC1-208ENST00000578357 RAG1P15918 1043 aa12.08□□□□□ -0.48
CUEDC1-208ENST00000578357 AACSQ86V21 672 aa12.08□□□□□ -0.48
CUEDC1-208ENST00000578357 RNPC3Q96LT9 517 aaKnown RBP12.08□□□□□ -0.48
CUEDC1-208ENST00000578357 DIS3Q9Y2L1 958 aaKnown RBP12.08□□□□□ -0.48
CUEDC1-208ENST00000578357 KIAA0355O15063 1070 aa12.07□□□□□ -0.48
CUEDC1-208ENST00000578357 KCTD2Q14681 263 aa12.07□□□□□ -0.48
CUEDC1-208ENST00000578357 HSP90AB4PQ58FF6 505 aa12.07□□□□□ -0.48
CUEDC1-208ENST00000578357 FAM47AQ5JRC9 791 aa12.07□□□□□ -0.48
CUEDC1-208ENST00000578357 KIAA1755Q5JYT7 1200 aa12.07□□□□□ -0.48
CUEDC1-208ENST00000578357 SIAH1Q8IUQ4 282 aa12.07□□□□□ -0.48
CUEDC1-208ENST00000578357 SPICE1Q8N0Z3 855 aa12.07□□□□□ -0.48
CUEDC1-208ENST00000578357 ATG4CQ96DT6 458 aa12.07□□□□□ -0.48
CUEDC1-208ENST00000578357 CCDC17Q96LX7 622 aa12.07□□□□□ -0.48
CUEDC1-208ENST00000578357 TINF2Q9BSI4 451 aa12.07□□□□□ -0.48
CUEDC1-208ENST00000578357 DCP1AQ9NPI6 582 aaPredicted RBP12.07□□□□□ -0.48
CUEDC1-208ENST00000578357 TMEM39AQ9NV64 488 aa12.07□□□□□ -0.48
CUEDC1-208ENST00000578357 COG6Q9Y2V7 657 aa12.07□□□□□ -0.48
CUEDC1-208ENST00000578357 FOCADQ5VW36 1801 aa12.07□□□□□ -0.48
CUEDC1-208ENST00000578357 MYH1P12882 1939 aa12.06□□□□□ -0.48
CUEDC1-208ENST00000578357 DCDC2CA8MYV0 355 aa12.06□□□□□ -0.48
CUEDC1-208ENST00000578357 WDR46O15213 610 aaKnown RBP12.06□□□□□ -0.48
CUEDC1-208ENST00000578357 PGK1P00558 417 aa12.06□□□□□ -0.48
CUEDC1-208ENST00000578357 PDE6AP16499 860 aa12.06□□□□□ -0.48
CUEDC1-208ENST00000578357 ITGB8P26012 769 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms