RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 POTECB2RU33 542 aa9.48□□□□□ -0.89
COPS3-215ENST00000578317 SLC3A2P08195 630 aaKnown RBP9.48□□□□□ -0.89
COPS3-215ENST00000578317 PSMA5P28066 241 aa9.48□□□□□ -0.89
COPS3-215ENST00000578317 PTPN5P54829 565 aa9.48□□□□□ -0.89
COPS3-215ENST00000578317 PPARAQ07869 468 aa9.48□□□□□ -0.89
COPS3-215ENST00000578317 TNFAIP1Q13829 316 aa9.48□□□□□ -0.89
COPS3-215ENST00000578317 AKNAD1Q5T1N1 836 aa9.48□□□□□ -0.89
COPS3-215ENST00000578317 STAG1Q8WVM7 1258 aa9.48□□□□□ -0.89
COPS3-215ENST00000578317 EHD4Q9H223 541 aa9.48□□□□□ -0.89
COPS3-215ENST00000578317 PI4KBQ9UBF8 816 aa9.48□□□□□ -0.89
COPS3-215ENST00000578317 PITPNM2Q9BZ72 1349 aa9.48□□□□□ -0.89
COPS3-215ENST00000578317 ZNF646O15015 1829 aaPredicted RBP9.47□□□□□ -0.89
COPS3-215ENST00000578317 CLRN2A0PK11 232 aa9.47□□□□□ -0.89
COPS3-215ENST00000578317 MINDY4BA8MYZ0 360 aa9.47□□□□□ -0.89
COPS3-215ENST00000578317 E7EWF7 191 aa9.47□□□□□ -0.89
COPS3-215ENST00000578317 POLR3DP05423 398 aaPredicted RBP9.47□□□□□ -0.89
COPS3-215ENST00000578317 EPHX2P34913 555 aa9.47□□□□□ -0.89
COPS3-215ENST00000578317 TNNI2P48788 182 aa9.47□□□□□ -0.89
COPS3-215ENST00000578317 PLCD1P51178 756 aa9.47□□□□□ -0.89
COPS3-215ENST00000578317 MAP3K10Q02779 954 aa9.47□□□□□ -0.89
COPS3-215ENST00000578317 GABPAQ06546 454 aa9.47□□□□□ -0.89
COPS3-215ENST00000578317 RABEP1Q15276 862 aa9.47□□□□□ -0.89
COPS3-215ENST00000578317 BLOC1S3Q6QNY0 202 aa9.47□□□□□ -0.89
COPS3-215ENST00000578317 MFSD6Q6ZSS7 791 aa9.47□□□□□ -0.89
COPS3-215ENST00000578317 PNMA8AQ86V59 439 aaPredicted RBP9.47□□□□□ -0.89
COPS3-215ENST00000578317 ZFPM1Q8IX07 1006 aa9.47□□□□□ -0.89
COPS3-215ENST00000578317 FBXL16Q8N461 479 aa9.47□□□□□ -0.89
COPS3-215ENST00000578317 PRR7Q8TB68 274 aa9.47□□□□□ -0.89
COPS3-215ENST00000578317 TRPM4Q8TD43 1214 aa9.47□□□□□ -0.89
COPS3-215ENST00000578317 NEK1Q96PY6 1258 aa9.47□□□□□ -0.89
COPS3-215ENST00000578317 TAF1DQ9H5J8 278 aaPredicted RBP9.47□□□□□ -0.89
COPS3-215ENST00000578317 CNNM2Q9H8M5 875 aa9.47□□□□□ -0.89
COPS3-215ENST00000578317 ZNF287Q9HBT7 754 aa9.47□□□□□ -0.89
COPS3-215ENST00000578317 PCDHB3Q9Y5E6 796 aa9.47□□□□□ -0.89
COPS3-215ENST00000578317 TAF6LQ9Y6J9 622 aa9.47□□□□□ -0.89
COPS3-215ENST00000578317 COL2A1P02458 1487 aaPredicted RBP9.47□□□□□ -0.89
COPS3-215ENST00000578317 PSME4Q14997 1843 aa9.47□□□□□ -0.89
COPS3-215ENST00000578317 ORC4O43929 436 aa9.46□□□□□ -0.89
COPS3-215ENST00000578317 VEGFAP15692 232 aaPredicted RBP9.46□□□□□ -0.89
COPS3-215ENST00000578317 RFX1P22670 979 aa9.46□□□□□ -0.89
COPS3-215ENST00000578317 SOX11P35716 441 aa9.46□□□□□ -0.89
COPS3-215ENST00000578317 CACNB3P54284 484 aa9.46□□□□□ -0.89
COPS3-215ENST00000578317 HAND2P61296 217 aa9.46□□□□□ -0.89
COPS3-215ENST00000578317 PDE4BQ07343 736 aa9.46□□□□□ -0.89
COPS3-215ENST00000578317 TRDNQ13061 729 aa9.46□□□□□ -0.89
COPS3-215ENST00000578317 PICALMQ13492 652 aa9.46□□□□□ -0.89
COPS3-215ENST00000578317 RASA3Q14644 834 aa9.46□□□□□ -0.89
COPS3-215ENST00000578317 ADCK5Q3MIX3 580 aa9.46□□□□□ -0.89
COPS3-215ENST00000578317 RNF19BQ6ZMZ0 732 aa9.46□□□□□ -0.89
COPS3-215ENST00000578317 SH3BP5LQ7L8J4 393 aa9.46□□□□□ -0.89
COPS3-215ENST00000578317 APOBEC3FQ8IUX4 373 aaKnown RBP9.46□□□□□ -0.89
COPS3-215ENST00000578317 EPS8L1Q8TE68 723 aa9.46□□□□□ -0.89
COPS3-215ENST00000578317 MTA3Q9BTC8 594 aa9.46□□□□□ -0.89
COPS3-215ENST00000578317 PPP1R12CQ9BZL4 782 aa9.46□□□□□ -0.89
COPS3-215ENST00000578317 KRT23Q9C075 422 aa9.46□□□□□ -0.89
COPS3-215ENST00000578317 ALDH8A1Q9H2A2 487 aaPredicted RBP9.46□□□□□ -0.89
COPS3-215ENST00000578317 ALG2Q9H553 416 aa9.46□□□□□ -0.89
COPS3-215ENST00000578317 PPP2R3BQ9Y5P8 575 aa9.46□□□□□ -0.89
COPS3-215ENST00000578317 ROBO3Q96MS0 1386 aa9.46□□□□□ -0.9
COPS3-215ENST00000578317 MAST2Q6P0Q8 1798 aa9.46□□□□□ -0.9
COPS3-215ENST00000578317 CYP2D7A0A087X1C5 515 aa9.45□□□□□ -0.9
COPS3-215ENST00000578317 DDTLA6NHG4 134 aaPredicted RBP9.45□□□□□ -0.9
COPS3-215ENST00000578317 TCP10L2B9ZVM9 353 aa9.45□□□□□ -0.9
COPS3-215ENST00000578317 HLA-DOAP06340 250 aa9.45□□□□□ -0.9
COPS3-215ENST00000578317 EXOSC10Q01780 885 aaKnown RBP9.45□□□□□ -0.9
COPS3-215ENST00000578317 TCP10Q12799 353 aa9.45□□□□□ -0.9
COPS3-215ENST00000578317 STOX1Q6ZVD7 989 aa9.45□□□□□ -0.9
COPS3-215ENST00000578317 C16orf86Q6ZW13 317 aa9.45□□□□□ -0.9
COPS3-215ENST00000578317 RUFY3Q7L099 469 aa9.45□□□□□ -0.9
COPS3-215ENST00000578317 DHX32Q7L7V1 743 aaKnown RBP9.45□□□□□ -0.9
COPS3-215ENST00000578317 RETREG3Q86VR2 466 aa9.45□□□□□ -0.9
COPS3-215ENST00000578317 TBC1D10CQ8IV04 446 aa9.45□□□□□ -0.9
COPS3-215ENST00000578317 SCUBE3Q8IX30 993 aa9.45□□□□□ -0.9
COPS3-215ENST00000578317 NCOA7Q8NI08 942 aa9.45□□□□□ -0.9
COPS3-215ENST00000578317 DEFB129Q9H1M3 183 aa9.45□□□□□ -0.9
COPS3-215ENST00000578317 SWAP70Q9UH65 585 aa9.45□□□□□ -0.9
COPS3-215ENST00000578317 SAP30BPQ9UHR5 308 aaKnown RBP9.45□□□□□ -0.9
COPS3-215ENST00000578317 HERC5Q9UII4 1024 aaKnown RBP9.45□□□□□ -0.9
COPS3-215ENST00000578317 SERPINB13Q9UIV8 391 aa9.45□□□□□ -0.9
COPS3-215ENST00000578317 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.45□□□□□ -0.9
COPS3-215ENST00000578317 RBM19Q9Y4C8 960 aaKnown RBP9.45□□□□□ -0.9
COPS3-215ENST00000578317 MYH13Q9UKX3 1938 aa9.45□□□□□ -0.9
COPS3-215ENST00000578317 WDR19Q8NEZ3 1342 aa9.45□□□□□ -0.9
COPS3-215ENST00000578317 CNTNAP1P78357 1384 aa9.45□□□□□ -0.9
COPS3-215ENST00000578317 MYO5AQ9Y4I1 1855 aaKnown RBP9.45□□□□□ -0.9
COPS3-215ENST00000578317 AK9Q5TCS8 1911 aa9.45□□□□□ -0.9
COPS3-215ENST00000578317 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.45□□□□□ -0.9
COPS3-215ENST00000578317 CYP2D6P10635 497 aa9.45□□□□□ -0.9
COPS3-215ENST00000578317 ANGEL2Q5VTE6 544 aaKnown RBP9.45□□□□□ -0.9
COPS3-215ENST00000578317 BLOC1S2Q6QNY1 142 aa9.45□□□□□ -0.9
COPS3-215ENST00000578317 THAP11Q96EK4 314 aa9.45□□□□□ -0.9
COPS3-215ENST00000578317 JAKMIP1Q96N16 626 aaKnown RBP9.45□□□□□ -0.9
COPS3-215ENST00000578317 TEPSINQ96N21 525 aa9.45□□□□□ -0.9
COPS3-215ENST00000578317 VEZTQ9HBM0 779 aa9.45□□□□□ -0.9
COPS3-215ENST00000578317 ZSWIM5Q9P217 1185 aa9.45□□□□□ -0.9
COPS3-215ENST00000578317 CYP46A1Q9Y6A2 500 aa9.45□□□□□ -0.9
COPS3-215ENST00000578317 TACC3Q9Y6A5 838 aa9.45□□□□□ -0.9
COPS3-215ENST00000578317 SMIM22K7EJ46 135 aa9.44□□□□□ -0.9
COPS3-215ENST00000578317 CASTP20810 708 aaKnown RBP9.44□□□□□ -0.9
COPS3-215ENST00000578317 RPS6KB1P23443 525 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms