RNA–Protein interactions for RNA: ENST00000578315.1

UPF3AP2-202, Transcript of UPF3A pseudogene 2, humanhuman

TSL 5 BASIC

Gene UPF3AP2, Length 730 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-202ENST00000578315 CERS3Q8IU89 383 aa16.54■□□□□ 0.24
UPF3AP2-202ENST00000578315 ARRDC4Q8NCT1 418 aa16.54■□□□□ 0.24
UPF3AP2-202ENST00000578315 BADQ92934 168 aa16.54■□□□□ 0.24
UPF3AP2-202ENST00000578315 FERMT2Q96AC1 680 aa16.54■□□□□ 0.24
UPF3AP2-202ENST00000578315 NOP58Q9Y2X3 529 aaKnown RBP16.54■□□□□ 0.24
UPF3AP2-202ENST00000578315 EYSQ5T1H1 3165 aa16.54■□□□□ 0.24
UPF3AP2-202ENST00000578315 KBTBD13C9JR72 458 aa16.53■□□□□ 0.24
UPF3AP2-202ENST00000578315 COBLO75128 1261 aa16.53■□□□□ 0.24
UPF3AP2-202ENST00000578315 IGHA2P01877 340 aa16.53■□□□□ 0.24
UPF3AP2-202ENST00000578315 ERCC3P19447 782 aa16.53■□□□□ 0.24
UPF3AP2-202ENST00000578315 PLS1Q14651 629 aa16.53■□□□□ 0.24
UPF3AP2-202ENST00000578315 COG2Q14746 738 aa16.53■□□□□ 0.24
UPF3AP2-202ENST00000578315 TRIM60Q495X7 471 aa16.53■□□□□ 0.24
UPF3AP2-202ENST00000578315 CDX2Q99626 313 aaPredicted RBP16.53■□□□□ 0.24
UPF3AP2-202ENST00000578315 RIOK1Q9BRS2 568 aaKnown RBP16.53■□□□□ 0.24
UPF3AP2-202ENST00000578315 SPATC1LQ9H0A9 340 aa16.53■□□□□ 0.24
UPF3AP2-202ENST00000578315 MAGEB6P1A0A0J9YX57 407 aa16.52■□□□□ 0.24
UPF3AP2-202ENST00000578315 ADCYAP1R1P41586 468 aa16.52■□□□□ 0.24
UPF3AP2-202ENST00000578315 KIAA1755Q5JYT7 1200 aa16.52■□□□□ 0.24
UPF3AP2-202ENST00000578315 OLFML2BQ68BL8 750 aa16.52■□□□□ 0.24
UPF3AP2-202ENST00000578315 SH3RF1Q7Z6J0 888 aa16.52■□□□□ 0.24
UPF3AP2-202ENST00000578315 AACSQ86V21 672 aa16.52■□□□□ 0.24
UPF3AP2-202ENST00000578315 NCAPG2Q86XI2 1143 aa16.52■□□□□ 0.24
UPF3AP2-202ENST00000578315 MCM9Q9NXL9 1143 aa16.52■□□□□ 0.24
UPF3AP2-202ENST00000578315 HOXC10Q9NYD6 342 aa16.52■□□□□ 0.24
UPF3AP2-202ENST00000578315 RLFQ13129 1914 aa16.52■□□□□ 0.23
UPF3AP2-202ENST00000578315 NAV1Q8NEY1 1877 aa16.51■□□□□ 0.23
UPF3AP2-202ENST00000578315 SEPT4O43236 478 aa16.51■□□□□ 0.23
UPF3AP2-202ENST00000578315 STRNO43815 780 aa16.51■□□□□ 0.23
UPF3AP2-202ENST00000578315 CYP2D6P10635 497 aa16.51■□□□□ 0.23
UPF3AP2-202ENST00000578315 GABPAQ06546 454 aa16.51■□□□□ 0.23
UPF3AP2-202ENST00000578315 CLEC10AQ8IUN9 316 aa16.51■□□□□ 0.23
UPF3AP2-202ENST00000578315 ITPRIPQ8IWB1 547 aa16.51■□□□□ 0.23
UPF3AP2-202ENST00000578315 SLC44A5Q8NCS7 719 aa16.51■□□□□ 0.23
UPF3AP2-202ENST00000578315 SEMA6BQ9H3T3 888 aa16.51■□□□□ 0.23
UPF3AP2-202ENST00000578315 EXOC6BQ9Y2D4 811 aa16.51■□□□□ 0.23
UPF3AP2-202ENST00000578315 LRRC41Q15345 812 aa16.5■□□□□ 0.23
UPF3AP2-202ENST00000578315 FAM47AQ5JRC9 791 aa16.5■□□□□ 0.23
UPF3AP2-202ENST00000578315 FTSJ3Q8IY81 847 aaKnown RBP16.5■□□□□ 0.23
UPF3AP2-202ENST00000578315 SPICE1Q8N0Z3 855 aa16.5■□□□□ 0.23
UPF3AP2-202ENST00000578315 MAFAQ8NHW3 353 aaPredicted RBP16.5■□□□□ 0.23
UPF3AP2-202ENST00000578315 SDR42E1Q8WUS8 393 aa16.5■□□□□ 0.23
UPF3AP2-202ENST00000578315 MYLIPQ8WY64 445 aa16.5■□□□□ 0.23
UPF3AP2-202ENST00000578315 CRNKL1Q9BZJ0 848 aaKnown RBP16.5■□□□□ 0.23
UPF3AP2-202ENST00000578315 BCL11AQ9H165 835 aa16.5■□□□□ 0.23
UPF3AP2-202ENST00000578315 PDLIM7Q9NR12 457 aa16.5■□□□□ 0.23
UPF3AP2-202ENST00000578315 ZNF236Q9UL36 1845 aa16.49■□□□□ 0.23
UPF3AP2-202ENST00000578315 VCANP13611 3396 aa16.49■□□□□ 0.23
UPF3AP2-202ENST00000578315 TRIM43BA6NCK2 446 aa16.49■□□□□ 0.23
UPF3AP2-202ENST00000578315 FLOT1O75955 427 aa16.49■□□□□ 0.23
UPF3AP2-202ENST00000578315 DSG3P32926 999 aa16.49■□□□□ 0.23
UPF3AP2-202ENST00000578315 SLC9C2Q5TAH2 1124 aa16.49■□□□□ 0.23
UPF3AP2-202ENST00000578315 SHCBP1Q8NEM2 672 aa16.49■□□□□ 0.23
UPF3AP2-202ENST00000578315 TRIM43Q96BQ3 446 aaPredicted RBP16.49■□□□□ 0.23
UPF3AP2-202ENST00000578315 ATG4CQ96DT6 458 aa16.49■□□□□ 0.23
UPF3AP2-202ENST00000578315 DYNLL2Q96FJ2 89 aa16.49■□□□□ 0.23
UPF3AP2-202ENST00000578315 TTYH1Q9H313 450 aaPredicted RBP16.49■□□□□ 0.23
UPF3AP2-202ENST00000578315 IL1RAPL2Q9NP60 686 aa16.49■□□□□ 0.23
UPF3AP2-202ENST00000578315 RLBP1P12271 317 aa16.48■□□□□ 0.23
UPF3AP2-202ENST00000578315 PDE6AP16499 860 aa16.48■□□□□ 0.23
UPF3AP2-202ENST00000578315 TLE2Q04725 743 aa16.48■□□□□ 0.23
UPF3AP2-202ENST00000578315 LCORLQ8N3X6 602 aa16.48■□□□□ 0.23
UPF3AP2-202ENST00000578315 MAML3Q96JK9 1138 aa16.48■□□□□ 0.23
UPF3AP2-202ENST00000578315 MROH8Q9H579 483 aa16.48■□□□□ 0.23
UPF3AP2-202ENST00000578315 SLC5A4Q9NY91 659 aa16.48■□□□□ 0.23
UPF3AP2-202ENST00000578315 A0A0G2JMZ2 1700 aa16.48■□□□□ 0.23
UPF3AP2-202ENST00000578315 ZNF532Q9HCE3 1301 aa16.47■□□□□ 0.23
UPF3AP2-202ENST00000578315 AKR1B1P15121 316 aa16.47■□□□□ 0.23
UPF3AP2-202ENST00000578315 ITGB8P26012 769 aa16.47■□□□□ 0.23
UPF3AP2-202ENST00000578315 SNX17Q15036 470 aa16.47■□□□□ 0.23
UPF3AP2-202ENST00000578315 CEP85Q6P2H3 762 aa16.47■□□□□ 0.23
UPF3AP2-202ENST00000578315 TMEM179Q6ZVK1 233 aa16.47■□□□□ 0.23
UPF3AP2-202ENST00000578315 SIAH1Q8IUQ4 282 aa16.47■□□□□ 0.23
UPF3AP2-202ENST00000578315 MB21D1Q8N884 522 aa16.47■□□□□ 0.23
UPF3AP2-202ENST00000578315 DNAJC2Q99543 621 aaKnown RBP16.47■□□□□ 0.23
UPF3AP2-202ENST00000578315 DCP1AQ9NPI6 582 aaPredicted RBP16.47■□□□□ 0.23
UPF3AP2-202ENST00000578315 SMIM22K7EJ46 135 aa16.46■□□□□ 0.23
UPF3AP2-202ENST00000578315 APBB1O00213 710 aa16.46■□□□□ 0.23
UPF3AP2-202ENST00000578315 GOLIM4O00461 696 aa16.46■□□□□ 0.23
UPF3AP2-202ENST00000578315 PGK2P07205 417 aa16.46■□□□□ 0.23
UPF3AP2-202ENST00000578315 FCER1AP12319 257 aa16.46■□□□□ 0.23
UPF3AP2-202ENST00000578315 SMAD3P84022 425 aaKnown RBP16.46■□□□□ 0.23
UPF3AP2-202ENST00000578315 TMEM132BQ14DG7 1078 aa16.46■□□□□ 0.23
UPF3AP2-202ENST00000578315 TTF1Q15361 905 aaPredicted RBP16.46■□□□□ 0.23
UPF3AP2-202ENST00000578315 SLFNL1Q499Z3 407 aa16.46■□□□□ 0.23
UPF3AP2-202ENST00000578315 ARMT1Q9H993 441 aa16.46■□□□□ 0.23
UPF3AP2-202ENST00000578315 XPNPEP3Q9NQH7 507 aa16.46■□□□□ 0.23
UPF3AP2-202ENST00000578315 CDH23Q9H251 3354 aa16.46■□□□□ 0.22
UPF3AP2-202ENST00000578315 PRKAB2O43741 272 aa16.45■□□□□ 0.22
UPF3AP2-202ENST00000578315 PGK1P00558 417 aa16.45■□□□□ 0.22
UPF3AP2-202ENST00000578315 FOSL2P15408 326 aa16.45■□□□□ 0.22
UPF3AP2-202ENST00000578315 TAL1P17542 331 aaPredicted RBP16.45■□□□□ 0.22
UPF3AP2-202ENST00000578315 EPHB4P54760 987 aa16.45■□□□□ 0.22
UPF3AP2-202ENST00000578315 ICA1Q05084 483 aa16.45■□□□□ 0.22
UPF3AP2-202ENST00000578315 TMED8Q6PL24 325 aaPredicted RBP16.45■□□□□ 0.22
UPF3AP2-202ENST00000578315 ERC1Q8IUD2 1116 aa16.45■□□□□ 0.22
UPF3AP2-202ENST00000578315 ABRAQ8N0Z2 381 aa16.45■□□□□ 0.22
UPF3AP2-202ENST00000578315 MMP19Q99542 508 aa16.45■□□□□ 0.22
UPF3AP2-202ENST00000578315 VCPKMTQ9H867 229 aa16.45■□□□□ 0.22
UPF3AP2-202ENST00000578315 ARHGEF10LQ9HCE6 1279 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms