RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 ZSCAN25Q6NSZ9 544 aa20.04■□□□□ 0.8
CDK5RAP3-206ENST00000578018 PUS7LQ9H0K6 701 aaKnown RBP20.04■□□□□ 0.8
CDK5RAP3-206ENST00000578018 PRO3102Q9H379 93 aa20.04■□□□□ 0.8
CDK5RAP3-206ENST00000578018 RBM27Q9P2N5 1060 aaKnown RBP20.04■□□□□ 0.8
CDK5RAP3-206ENST00000578018 OGDHLQ9ULD0 1010 aa20.04■□□□□ 0.8
CDK5RAP3-206ENST00000578018 SZT2Q5T011 3432 aa20.04■□□□□ 0.8
CDK5RAP3-206ENST00000578018 USP17L12C9JPN9 530 aa20.03■□□□□ 0.8
CDK5RAP3-206ENST00000578018 USP17L21D6R901 530 aa20.03■□□□□ 0.8
CDK5RAP3-206ENST00000578018 GLRX3O76003 335 aaKnown RBP20.03■□□□□ 0.8
CDK5RAP3-206ENST00000578018 KIAA1755Q5JYT7 1200 aa20.03■□□□□ 0.8
CDK5RAP3-206ENST00000578018 WDR78Q5VTH9 848 aa20.03■□□□□ 0.8
CDK5RAP3-206ENST00000578018 TANGO6Q9C0B7 1094 aa20.03■□□□□ 0.8
CDK5RAP3-206ENST00000578018 DCTPP1Q9H773 170 aa20.03■□□□□ 0.8
CDK5RAP3-206ENST00000578018 SLC4A4Q9Y6R1 1079 aa20.03■□□□□ 0.8
CDK5RAP3-206ENST00000578018 GREB1LQ9C091 1923 aaPredicted RBP20.03■□□□□ 0.8
CDK5RAP3-206ENST00000578018 SLC15A5A6NIM6 579 aa20.02■□□□□ 0.8
CDK5RAP3-206ENST00000578018 PTPREP23469 700 aa20.02■□□□□ 0.8
CDK5RAP3-206ENST00000578018 CDK8P49336 464 aa20.02■□□□□ 0.8
CDK5RAP3-206ENST00000578018 ICA1Q05084 483 aa20.02■□□□□ 0.8
CDK5RAP3-206ENST00000578018 C16orf86Q6ZW13 317 aa20.02■□□□□ 0.8
CDK5RAP3-206ENST00000578018 SIAH1Q8IUQ4 282 aa20.02■□□□□ 0.8
CDK5RAP3-206ENST00000578018 AMOTL1Q8IY63 956 aa20.02■□□□□ 0.8
CDK5RAP3-206ENST00000578018 DDRGK1Q96HY6 314 aa20.02■□□□□ 0.8
CDK5RAP3-206ENST00000578018 CCDC17Q96LX7 622 aa20.02■□□□□ 0.8
CDK5RAP3-206ENST00000578018 NBPF3Q9H094 633 aa20.02■□□□□ 0.8
CDK5RAP3-206ENST00000578018 CCND3P30281 292 aaPredicted RBP20.01■□□□□ 0.79
CDK5RAP3-206ENST00000578018 GRB14Q14449 540 aa20.01■□□□□ 0.79
CDK5RAP3-206ENST00000578018 COG2Q14746 738 aa20.01■□□□□ 0.79
CDK5RAP3-206ENST00000578018 LPAR1Q92633 364 aa20.01■□□□□ 0.79
CDK5RAP3-206ENST00000578018 ARHGEF10LQ9HCE6 1279 aa20.01■□□□□ 0.79
CDK5RAP3-206ENST00000578018 FLRT1Q9NZU1 646 aa20.01■□□□□ 0.79
CDK5RAP3-206ENST00000578018 TMX2Q9Y320 296 aa20.01■□□□□ 0.79
CDK5RAP3-206ENST00000578018 LAMA3Q16787 3333 aa20.01■□□□□ 0.79
CDK5RAP3-206ENST00000578018 HOXC6P09630 235 aa20■□□□□ 0.79
CDK5RAP3-206ENST00000578018 TSHZ3Q63HK5 1081 aa20■□□□□ 0.79
CDK5RAP3-206ENST00000578018 CTR9Q6PD62 1173 aa20■□□□□ 0.79
CDK5RAP3-206ENST00000578018 KBTBD3Q8NAB2 608 aa20■□□□□ 0.79
CDK5RAP3-206ENST00000578018 C11orf49Q9H6J7 331 aa20■□□□□ 0.79
CDK5RAP3-206ENST00000578018 SH2D4AQ9H788 454 aa20■□□□□ 0.79
CDK5RAP3-206ENST00000578018 VCPKMTQ9H867 229 aa20■□□□□ 0.79
CDK5RAP3-206ENST00000578018 HOXC10Q9NYD6 342 aa20■□□□□ 0.79
CDK5RAP3-206ENST00000578018 ARPP21Q9UBL0 812 aaPredicted RBP20■□□□□ 0.79
CDK5RAP3-206ENST00000578018 IVNS1ABPQ9Y6Y0 642 aa20■□□□□ 0.79
CDK5RAP3-206ENST00000578018 COL11A1P12107 1806 aaPredicted RBP19.99■□□□□ 0.79
CDK5RAP3-206ENST00000578018 LHX8Q68G74 356 aa19.99■□□□□ 0.79
CDK5RAP3-206ENST00000578018 SPICE1Q8N0Z3 855 aa19.99■□□□□ 0.79
CDK5RAP3-206ENST00000578018 GPATCH3Q96I76 525 aa19.99■□□□□ 0.79
CDK5RAP3-206ENST00000578018 STRBPQ96SI9 672 aaKnown RBP19.99■□□□□ 0.79
CDK5RAP3-206ENST00000578018 MOV10L1Q9BXT6 1211 aaKnown RBP19.99■□□□□ 0.79
CDK5RAP3-206ENST00000578018 PFASO15067 1338 aa19.99■□□□□ 0.79
CDK5RAP3-206ENST00000578018 MB21D1Q8N884 522 aa19.98■□□□□ 0.79
CDK5RAP3-206ENST00000578018 SPATC1LQ9H0A9 340 aa19.98■□□□□ 0.79
CDK5RAP3-206ENST00000578018 ROBO3Q96MS0 1386 aa19.97■□□□□ 0.79
CDK5RAP3-206ENST00000578018 WDR46O15213 610 aaKnown RBP19.97■□□□□ 0.79
CDK5RAP3-206ENST00000578018 FLOT1O75955 427 aa19.97■□□□□ 0.79
CDK5RAP3-206ENST00000578018 DSG3P32926 999 aa19.97■□□□□ 0.79
CDK5RAP3-206ENST00000578018 MFSD14CQ5VZR4 134 aa19.97■□□□□ 0.79
CDK5RAP3-206ENST00000578018 C7orf61Q8IZ16 206 aa19.97■□□□□ 0.79
CDK5RAP3-206ENST00000578018 SHCBP1Q8NEM2 672 aa19.97■□□□□ 0.79
CDK5RAP3-206ENST00000578018 NPLOC4Q8TAT6 608 aa19.97■□□□□ 0.79
CDK5RAP3-206ENST00000578018 APPBP2Q92624 585 aa19.97■□□□□ 0.79
CDK5RAP3-206ENST00000578018 OSBP2Q969R2 916 aa19.97■□□□□ 0.79
CDK5RAP3-206ENST00000578018 ATG4CQ96DT6 458 aa19.97■□□□□ 0.79
CDK5RAP3-206ENST00000578018 GSG1L2A8MUP6 293 aa19.96■□□□□ 0.79
CDK5RAP3-206ENST00000578018 IGHA2P01877 340 aa19.96■□□□□ 0.79
CDK5RAP3-206ENST00000578018 COL6A1P12109 1028 aa19.96■□□□□ 0.79
CDK5RAP3-206ENST00000578018 EEF2P13639 858 aaKnown RBP19.96■□□□□ 0.79
CDK5RAP3-206ENST00000578018 ERCC3P19447 782 aa19.96■□□□□ 0.79
CDK5RAP3-206ENST00000578018 ADORA2AP29274 412 aa19.96■□□□□ 0.79
CDK5RAP3-206ENST00000578018 SBK1Q52WX2 424 aa19.96■□□□□ 0.79
CDK5RAP3-206ENST00000578018 KANSL2Q9H9L4 492 aa19.96■□□□□ 0.79
CDK5RAP3-206ENST00000578018 PCDHB15Q9Y5E8 787 aa19.96■□□□□ 0.79
CDK5RAP3-206ENST00000578018 RNF113AO15541 343 aaKnown RBP19.95■□□□□ 0.78
CDK5RAP3-206ENST00000578018 ATP2B2Q01814 1243 aa19.95■□□□□ 0.78
CDK5RAP3-206ENST00000578018 GIMAP6Q6P9H5 292 aa19.95■□□□□ 0.78
CDK5RAP3-206ENST00000578018 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.95■□□□□ 0.78
CDK5RAP3-206ENST00000578018 ZNFX1Q9P2E3 1918 aaKnown RBP19.94■□□□□ 0.78
CDK5RAP3-206ENST00000578018 A0A1W2PPC1 479 aa19.94■□□□□ 0.78
CDK5RAP3-206ENST00000578018 STRNO43815 780 aa19.94■□□□□ 0.78
CDK5RAP3-206ENST00000578018 ZFYP08048 801 aaPredicted RBP19.94■□□□□ 0.78
CDK5RAP3-206ENST00000578018 CYP2C19P33261 490 aa19.94■□□□□ 0.78
CDK5RAP3-206ENST00000578018 EPB41L4AQ9HCS5 686 aaPredicted RBP19.94■□□□□ 0.78
CDK5RAP3-206ENST00000578018 MYH4Q9Y623 1939 aa19.94■□□□□ 0.78
CDK5RAP3-206ENST00000578018 GPAA1O43292 621 aa19.93■□□□□ 0.78
CDK5RAP3-206ENST00000578018 CYBAP13498 195 aa19.93■□□□□ 0.78
CDK5RAP3-206ENST00000578018 RASA1P20936 1047 aa19.93■□□□□ 0.78
CDK5RAP3-206ENST00000578018 PLS1Q14651 629 aa19.93■□□□□ 0.78
CDK5RAP3-206ENST00000578018 OLFML2BQ68BL8 750 aa19.93■□□□□ 0.78
CDK5RAP3-206ENST00000578018 DPP9Q86TI2 863 aa19.93■□□□□ 0.78
CDK5RAP3-206ENST00000578018 TRPV1Q8NER1 839 aa19.93■□□□□ 0.78
CDK5RAP3-206ENST00000578018 MROH8Q9H579 483 aa19.93■□□□□ 0.78
CDK5RAP3-206ENST00000578018 GOPCQ9HD26 462 aa19.93■□□□□ 0.78
CDK5RAP3-206ENST00000578018 STAP2Q9UGK3 403 aa19.93■□□□□ 0.78
CDK5RAP3-206ENST00000578018 DDX20Q9UHI6 824 aaKnown RBP19.93■□□□□ 0.78
CDK5RAP3-206ENST00000578018 ZMYND8Q9ULU4 1186 aaPredicted RBP19.93■□□□□ 0.78
CDK5RAP3-206ENST00000578018 ADAMTS5Q9UNA0 930 aa19.93■□□□□ 0.78
CDK5RAP3-206ENST00000578018 TTC41PQ6P2S7 1318 aa19.93■□□□□ 0.78
CDK5RAP3-206ENST00000578018 M0R2C6 588 aa19.92■□□□□ 0.78
CDK5RAP3-206ENST00000578018 MSCO60682 206 aa19.92■□□□□ 0.78
CDK5RAP3-206ENST00000578018 TMEM132BQ14DG7 1078 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms