RNA–Protein interactions for RNA: ENST00000577830.5

CUEDC1-206, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC1, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-206ENST00000577830 TSR1Q2NL82 804 aaKnown RBP16.66■□□□□ 0.26
CUEDC1-206ENST00000577830 UIMC1Q96RL1 719 aa16.66■□□□□ 0.26
CUEDC1-206ENST00000577830 PLEKHA4Q9H4M7 779 aa16.66■□□□□ 0.26
CUEDC1-206ENST00000577830 RABEP2Q9H5N1 569 aa16.66■□□□□ 0.26
CUEDC1-206ENST00000577830 TSPY2A6NKD2 308 aa16.66■□□□□ 0.26
CUEDC1-206ENST00000577830 ARID4AP29374 1257 aaPredicted RBP16.66■□□□□ 0.26
CUEDC1-206ENST00000577830 CAGE1Q8TC20 777 aa16.65■□□□□ 0.26
CUEDC1-206ENST00000577830 ZSCAN10Q96SZ4 725 aaPredicted RBP16.65■□□□□ 0.26
CUEDC1-206ENST00000577830 ARFGEF2Q9Y6D5 1785 aa16.65■□□□□ 0.26
CUEDC1-206ENST00000577830 SRGAP2O75044 1071 aa16.65■□□□□ 0.26
CUEDC1-206ENST00000577830 ZNF18P17022 549 aa16.65■□□□□ 0.26
CUEDC1-206ENST00000577830 PPARDQ03181 441 aa16.65■□□□□ 0.26
CUEDC1-206ENST00000577830 DDB1Q16531 1140 aa16.65■□□□□ 0.26
CUEDC1-206ENST00000577830 NELFBQ8WX92 580 aa16.65■□□□□ 0.26
CUEDC1-206ENST00000577830 HDAC6Q9UBN7 1215 aa16.65■□□□□ 0.26
CUEDC1-206ENST00000577830 MROH5Q6ZUA9 1318 aa16.65■□□□□ 0.26
CUEDC1-206ENST00000577830 TUBB4AP04350 444 aa16.65■□□□□ 0.26
CUEDC1-206ENST00000577830 CCDC152Q4G0S7 254 aa16.65■□□□□ 0.26
CUEDC1-206ENST00000577830 FAM182BQ5T319 152 aa16.65■□□□□ 0.26
CUEDC1-206ENST00000577830 CPVLQ9H3G5 476 aa16.65■□□□□ 0.26
CUEDC1-206ENST00000577830 WDR19Q8NEZ3 1342 aa16.65■□□□□ 0.26
CUEDC1-206ENST00000577830 RNF225M0QZC1 329 aaPredicted RBP16.64■□□□□ 0.25
CUEDC1-206ENST00000577830 ZRANB2O95218 330 aaKnown RBP eCLIP16.64■□□□□ 0.25
CUEDC1-206ENST00000577830 TXLNAP40222 546 aa16.64■□□□□ 0.25
CUEDC1-206ENST00000577830 MATR3P43243 847 aaKnown RBP eCLIP16.64■□□□□ 0.25
CUEDC1-206ENST00000577830 EIF5P55010 431 aaKnown RBP16.64■□□□□ 0.25
CUEDC1-206ENST00000577830 KRT31Q15323 416 aa16.64■□□□□ 0.25
CUEDC1-206ENST00000577830 TMTC2Q8N394 836 aa16.64■□□□□ 0.25
CUEDC1-206ENST00000577830 PSMB7Q99436 277 aa16.64■□□□□ 0.25
CUEDC1-206ENST00000577830 CHP1Q99653 195 aa16.64■□□□□ 0.25
CUEDC1-206ENST00000577830 VAT1LQ9HCJ6 419 aa16.64■□□□□ 0.25
CUEDC1-206ENST00000577830 ADAMTS3O15072 1205 aa16.64■□□□□ 0.25
CUEDC1-206ENST00000577830 TBX2Q13207 712 aaPredicted RBP16.64■□□□□ 0.25
CUEDC1-206ENST00000577830 ABCB6Q9NP58 842 aa16.64■□□□□ 0.25
CUEDC1-206ENST00000577830 STAT6P42226 847 aa16.64■□□□□ 0.25
CUEDC1-206ENST00000577830 KCNJ6P48051 423 aa16.64■□□□□ 0.25
CUEDC1-206ENST00000577830 HSP90B2PQ58FF3 399 aa16.64■□□□□ 0.25
CUEDC1-206ENST00000577830 C10orf67Q8IYJ2 551 aa16.64■□□□□ 0.25
CUEDC1-206ENST00000577830 STAG1Q8WVM7 1258 aa16.64■□□□□ 0.25
CUEDC1-206ENST00000577830 KIFC2Q96AC6 838 aa16.64■□□□□ 0.25
CUEDC1-206ENST00000577830 SHISA4Q96DD7 197 aa16.64■□□□□ 0.25
CUEDC1-206ENST00000577830 PNKPQ96T60 521 aa16.64■□□□□ 0.25
CUEDC1-206ENST00000577830 PLA2G12BQ9BX93 195 aa16.64■□□□□ 0.25
CUEDC1-206ENST00000577830 TRIM34Q9BYJ4 488 aa16.64■□□□□ 0.25
CUEDC1-206ENST00000577830 KCND1Q9NSA2 647 aa16.64■□□□□ 0.25
CUEDC1-206ENST00000577830 CTAGE15A4D2H0 777 aa16.63■□□□□ 0.25
CUEDC1-206ENST00000577830 KCNQ2O43526 872 aa16.63■□□□□ 0.25
CUEDC1-206ENST00000577830 CTAGE8P0CG41 777 aa16.63■□□□□ 0.25
CUEDC1-206ENST00000577830 CYP2C19P33261 490 aa16.63■□□□□ 0.25
CUEDC1-206ENST00000577830 KIAA1328Q86T90 577 aa16.63■□□□□ 0.25
CUEDC1-206ENST00000577830 CTAGE6Q86UF2 777 aa16.63■□□□□ 0.25
CUEDC1-206ENST00000577830 CTAGE4Q8IX94 777 aa16.63■□□□□ 0.25
CUEDC1-206ENST00000577830 SIPA1L3O60292 1781 aaPredicted RBP16.63■□□□□ 0.25
CUEDC1-206ENST00000577830 MFAP3LO75121 409 aa16.63■□□□□ 0.25
CUEDC1-206ENST00000577830 GYPCP04921 128 aa16.63■□□□□ 0.25
CUEDC1-206ENST00000577830 TRIM47Q96LD4 638 aa16.63■□□□□ 0.25
CUEDC1-206ENST00000577830 H3BQF6 201 aa16.63■□□□□ 0.25
CUEDC1-206ENST00000577830 SRGAP1Q7Z6B7 1085 aa16.63■□□□□ 0.25
CUEDC1-206ENST00000577830 FCHSD1Q86WN1 690 aa16.63■□□□□ 0.25
CUEDC1-206ENST00000577830 IQUBQ8NA54 791 aa16.63■□□□□ 0.25
CUEDC1-206ENST00000577830 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.63■□□□□ 0.25
CUEDC1-206ENST00000577830 ABCC12Q96J65 1359 aa16.62■□□□□ 0.25
CUEDC1-206ENST00000577830 ABCC6O95255 1503 aa16.62■□□□□ 0.25
CUEDC1-206ENST00000577830 A0A1B0GTH6 734 aa16.62■□□□□ 0.25
CUEDC1-206ENST00000577830 CAPN2P17655 700 aa16.62■□□□□ 0.25
CUEDC1-206ENST00000577830 GNAT2P19087 354 aa16.62■□□□□ 0.25
CUEDC1-206ENST00000577830 RABGGTAQ92696 567 aa16.62■□□□□ 0.25
CUEDC1-206ENST00000577830 MACROD2A1Z1Q3 448 aa16.62■□□□□ 0.25
CUEDC1-206ENST00000577830 KCNJ18B7U540 433 aa16.62■□□□□ 0.25
CUEDC1-206ENST00000577830 KCNJ12Q14500 433 aa16.62■□□□□ 0.25
CUEDC1-206ENST00000577830 TAF3Q5VWG9 929 aa16.62■□□□□ 0.25
CUEDC1-206ENST00000577830 AK7Q96M32 723 aa16.62■□□□□ 0.25
CUEDC1-206ENST00000577830 GNL3LQ9NVN8 582 aaKnown RBP16.62■□□□□ 0.25
CUEDC1-206ENST00000577830 ADD3Q9UEY8 706 aaKnown RBP16.62■□□□□ 0.25
CUEDC1-206ENST00000577830 STX8Q9UNK0 236 aa16.62■□□□□ 0.25
CUEDC1-206ENST00000577830 SARSP49591 514 aaKnown RBP16.62■□□□□ 0.25
CUEDC1-206ENST00000577830 IRX5P78411 483 aaPredicted RBP16.62■□□□□ 0.25
CUEDC1-206ENST00000577830 PAK1Q13153 545 aa16.62■□□□□ 0.25
CUEDC1-206ENST00000577830 CAVIN4Q5BKX8 364 aa16.62■□□□□ 0.25
CUEDC1-206ENST00000577830 GSPT2Q8IYD1 628 aaKnown RBP16.62■□□□□ 0.25
CUEDC1-206ENST00000577830 CDC23Q9UJX2 597 aa16.62■□□□□ 0.25
CUEDC1-206ENST00000577830 GOLGA8HP0CJ92 632 aa16.61■□□□□ 0.25
CUEDC1-206ENST00000577830 ERCC5P28715 1186 aaPredicted RBP16.61■□□□□ 0.25
CUEDC1-206ENST00000577830 ENOX2Q16206 610 aaKnown RBP16.61■□□□□ 0.25
CUEDC1-206ENST00000577830 ZSCAN26Q16670 478 aa16.61■□□□□ 0.25
CUEDC1-206ENST00000577830 HEATR3Q7Z4Q2 680 aa16.61■□□□□ 0.25
CUEDC1-206ENST00000577830 CNGA4Q8IV77 575 aa16.61■□□□□ 0.25
CUEDC1-206ENST00000577830 NOA1Q8NC60 698 aaKnown RBP16.61■□□□□ 0.25
CUEDC1-206ENST00000577830 ADAM21Q9UKJ8 722 aa16.61■□□□□ 0.25
CUEDC1-206ENST00000577830 FAN1Q9Y2M0 1017 aa16.61■□□□□ 0.25
CUEDC1-206ENST00000577830 PKN1Q16512 942 aa16.61■□□□□ 0.25
CUEDC1-206ENST00000577830 NAPGQ99747 312 aaPredicted RBP16.61■□□□□ 0.25
CUEDC1-206ENST00000577830 MCM9Q9NXL9 1143 aa16.61■□□□□ 0.25
CUEDC1-206ENST00000577830 COPB1P53618 953 aaKnown RBP16.6■□□□□ 0.25
CUEDC1-206ENST00000577830 VSNL1P62760 191 aa16.6■□□□□ 0.25
CUEDC1-206ENST00000577830 ERVK-24P63145 666 aa16.6■□□□□ 0.25
CUEDC1-206ENST00000577830 ALX1Q15699 326 aa16.6■□□□□ 0.25
CUEDC1-206ENST00000577830 CCDC178Q5BJE1 867 aa16.6■□□□□ 0.25
CUEDC1-206ENST00000577830 SRBD1Q8N5C6 995 aaKnown RBP16.6■□□□□ 0.25
CUEDC1-206ENST00000577830 FUT8Q9BYC5 575 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms