RNA–Protein interactions for RNA: ENST00000577536.1

CDH8-204, Transcript of cadherin 8, humanhuman

TSL 3

Gene CDH8, Length 324 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-204ENST00000577536 KREMEN1Q96MU8 473 aa4.83□□□□□ -1.64
CDH8-204ENST00000577536 DNAJA2O60884 412 aa4.82□□□□□ -1.64
CDH8-204ENST00000577536 TSPAN15O95858 294 aa4.82□□□□□ -1.64
CDH8-204ENST00000577536 HPXP02790 462 aa4.82□□□□□ -1.64
CDH8-204ENST00000577536 RAP1GAPP47736 663 aa4.82□□□□□ -1.64
CDH8-204ENST00000577536 PHACTR4Q8IZ21 702 aa4.82□□□□□ -1.64
CDH8-204ENST00000577536 MYLIPQ8WY64 445 aa4.82□□□□□ -1.64
CDH8-204ENST00000577536 PPP1R16BQ96T49 567 aa4.82□□□□□ -1.64
CDH8-204ENST00000577536 ASPNQ9BXN1 380 aa4.82□□□□□ -1.64
CDH8-204ENST00000577536 NSUN3Q9H649 340 aaKnown RBP4.82□□□□□ -1.64
CDH8-204ENST00000577536 COPRSQ9NQ92 184 aa4.82□□□□□ -1.64
CDH8-204ENST00000577536 KCNQ5Q9NR82 932 aa4.82□□□□□ -1.64
CDH8-204ENST00000577536 ROBO2Q9HCK4 1378 aa4.81□□□□□ -1.64
CDH8-204ENST00000577536 TLR3O15455 904 aaKnown RBP4.81□□□□□ -1.64
CDH8-204ENST00000577536 LTKP29376 864 aa4.81□□□□□ -1.64
CDH8-204ENST00000577536 FBXL19Q6PCT2 694 aa4.81□□□□□ -1.64
CDH8-204ENST00000577536 SYDE1Q6ZW31 735 aaPredicted RBP4.81□□□□□ -1.64
CDH8-204ENST00000577536 FBXO15Q8NCQ5 510 aaPredicted RBP4.81□□□□□ -1.64
CDH8-204ENST00000577536 DIRC2Q96SL1 478 aa4.81□□□□□ -1.64
CDH8-204ENST00000577536 KIF2CQ99661 725 aa4.81□□□□□ -1.64
CDH8-204ENST00000577536 BCL2L13Q9BXK5 485 aa4.81□□□□□ -1.64
CDH8-204ENST00000577536 LRRC3Q9BY71 257 aa4.81□□□□□ -1.64
CDH8-204ENST00000577536 PCDHA11Q9Y5I1 949 aa4.81□□□□□ -1.64
CDH8-204ENST00000577536 RBM47A0AV96 593 aaKnown RBP4.8□□□□□ -1.64
CDH8-204ENST00000577536 RGS13O14921 159 aa4.8□□□□□ -1.64
CDH8-204ENST00000577536 GREM1O60565 184 aa4.8□□□□□ -1.64
CDH8-204ENST00000577536 ZGLP1P0C6A0 271 aa4.8□□□□□ -1.64
CDH8-204ENST00000577536 EIF4A3P38919 411 aaKnown RBP4.8□□□□□ -1.64
CDH8-204ENST00000577536 MLECQ14165 292 aa4.8□□□□□ -1.64
CDH8-204ENST00000577536 CWF19L2Q2TBE0 894 aaKnown RBP4.8□□□□□ -1.64
CDH8-204ENST00000577536 CILP2Q8IUL8 1156 aa4.8□□□□□ -1.64
CDH8-204ENST00000577536 PDZD8Q8NEN9 1154 aa4.8□□□□□ -1.64
CDH8-204ENST00000577536 GIPC2Q8TF65 315 aa4.8□□□□□ -1.64
CDH8-204ENST00000577536 KRTAP9-8Q9BYQ0 159 aa4.8□□□□□ -1.64
CDH8-204ENST00000577536 SP110Q9HB58 689 aa4.8□□□□□ -1.64
CDH8-204ENST00000577536 SUPT16HQ9Y5B9 1047 aaKnown RBP4.8□□□□□ -1.64
CDH8-204ENST00000577536 SHISA3A0PJX4 238 aa4.79□□□□□ -1.64
CDH8-204ENST00000577536 SLC22A31A6NKX4 558 aa4.79□□□□□ -1.64
CDH8-204ENST00000577536 ATE1O95260 518 aa4.79□□□□□ -1.64
CDH8-204ENST00000577536 GBP1P32455 592 aa4.79□□□□□ -1.64
CDH8-204ENST00000577536 TRHRP34981 398 aaPredicted RBP4.79□□□□□ -1.64
CDH8-204ENST00000577536 CHMP4BP1P59074 171 aa4.79□□□□□ -1.64
CDH8-204ENST00000577536 MRPL58Q14197 206 aaKnown RBP4.79□□□□□ -1.64
CDH8-204ENST00000577536 ZNF326Q5BKZ1 582 aaKnown RBP4.79□□□□□ -1.64
CDH8-204ENST00000577536 ARSHQ5FYA8 562 aa4.79□□□□□ -1.64
CDH8-204ENST00000577536 OXR1Q8N573 874 aa4.79□□□□□ -1.64
CDH8-204ENST00000577536 DHX38Q92620 1227 aaKnown RBP4.79□□□□□ -1.64
CDH8-204ENST00000577536 SYTL4Q96C24 671 aaPredicted RBP4.79□□□□□ -1.64
CDH8-204ENST00000577536 VWCEQ96DN2 955 aa4.79□□□□□ -1.64
CDH8-204ENST00000577536 EPB41L4BQ9H329 900 aa4.79□□□□□ -1.64
CDH8-204ENST00000577536 KCNK12Q9HB15 430 aa4.79□□□□□ -1.64
CDH8-204ENST00000577536 BRMS1Q9HCU9 246 aa4.79□□□□□ -1.64
CDH8-204ENST00000577536 DCP1AQ9NPI6 582 aaPredicted RBP4.79□□□□□ -1.64
CDH8-204ENST00000577536 PCDHB14Q9Y5E9 798 aa4.79□□□□□ -1.64
CDH8-204ENST00000577536 FITM1A5D6W6 292 aa4.78□□□□□ -1.64
CDH8-204ENST00000577536 NFIBO00712 420 aa4.78□□□□□ -1.64
CDH8-204ENST00000577536 UBOX5O94941 541 aa4.78□□□□□ -1.64
CDH8-204ENST00000577536 KRT1P04264 644 aa4.78□□□□□ -1.64
CDH8-204ENST00000577536 C1QTNF9P0C862 333 aa4.78□□□□□ -1.64
CDH8-204ENST00000577536 RAG1P15918 1043 aa4.78□□□□□ -1.64
CDH8-204ENST00000577536 CRKP46108 304 aa4.78□□□□□ -1.64
CDH8-204ENST00000577536 RNF4P78317 190 aa4.78□□□□□ -1.64
CDH8-204ENST00000577536 TEKQ02763 1124 aa4.78□□□□□ -1.64
CDH8-204ENST00000577536 NR0B2Q15466 257 aa4.78□□□□□ -1.64
CDH8-204ENST00000577536 CLEC16AQ2KHT3 1053 aa4.78□□□□□ -1.64
CDH8-204ENST00000577536 KRTAP19-4Q3LI73 84 aa4.78□□□□□ -1.64
CDH8-204ENST00000577536 TIGD5Q53EQ6 642 aa4.78□□□□□ -1.64
CDH8-204ENST00000577536 HS2ST1Q7LGA3 356 aa4.78□□□□□ -1.64
CDH8-204ENST00000577536 ANKLE2Q86XL3 938 aa4.78□□□□□ -1.64
CDH8-204ENST00000577536 LILRA2Q8N149 483 aa4.78□□□□□ -1.64
CDH8-204ENST00000577536 ENOX1Q8TC92 643 aaKnown RBP4.78□□□□□ -1.64
CDH8-204ENST00000577536 ZNF296Q8WUU4 475 aaPredicted RBP4.78□□□□□ -1.64
CDH8-204ENST00000577536 TOX2Q96NM4 488 aa4.78□□□□□ -1.64
CDH8-204ENST00000577536 RNF32Q9H0A6 362 aa4.78□□□□□ -1.64
CDH8-204ENST00000577536 ASCC2Q9H1I8 757 aaPredicted RBP4.78□□□□□ -1.64
CDH8-204ENST00000577536 C19orf44Q9H6X5 657 aa4.78□□□□□ -1.64
CDH8-204ENST00000577536 GMIPQ9P107 970 aa4.78□□□□□ -1.64
CDH8-204ENST00000577536 ADAMTS1Q9UHI8 967 aa4.78□□□□□ -1.64
CDH8-204ENST00000577536 GGT7Q9UJ14 662 aa4.78□□□□□ -1.64
CDH8-204ENST00000577536 CFPP27918 469 aa4.77□□□□□ -1.65
CDH8-204ENST00000577536 NMIQ13287 307 aaPredicted RBP4.77□□□□□ -1.65
CDH8-204ENST00000577536 CDCP2Q5VXM1 449 aa4.77□□□□□ -1.65
CDH8-204ENST00000577536 OVOS1Q6IE37 1185 aa4.77□□□□□ -1.65
CDH8-204ENST00000577536 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.77□□□□□ -1.65
CDH8-204ENST00000577536 BCL11AQ9H165 835 aa4.77□□□□□ -1.65
CDH8-204ENST00000577536 EHMT1Q9H9B1 1298 aa4.77□□□□□ -1.65
CDH8-204ENST00000577536 EBF1Q9UH73 591 aa4.77□□□□□ -1.65
CDH8-204ENST00000577536 NCANO14594 1321 aa4.76□□□□□ -1.65
CDH8-204ENST00000577536 TMEM253P0C7T8 217 aa4.76□□□□□ -1.65
CDH8-204ENST00000577536 CHRNEQ04844 493 aa4.76□□□□□ -1.65
CDH8-204ENST00000577536 DUSP4Q13115 394 aa4.76□□□□□ -1.65
CDH8-204ENST00000577536 NBPF12Q5TAG4 269 aaPredicted RBP4.76□□□□□ -1.65
CDH8-204ENST00000577536 SPPL2CQ8IUH8 684 aa4.76□□□□□ -1.65
CDH8-204ENST00000577536 LRRC56Q8IYG6 542 aaPredicted RBP4.76□□□□□ -1.65
CDH8-204ENST00000577536 REXO1Q8N1G1 1221 aaKnown RBP4.76□□□□□ -1.65
CDH8-204ENST00000577536 SYTL5Q8TDW5 730 aaPredicted RBP4.76□□□□□ -1.65
CDH8-204ENST00000577536 LINC01599Q8WXQ3 324 aa4.76□□□□□ -1.65
CDH8-204ENST00000577536 HDAC8Q9BY41 377 aa4.76□□□□□ -1.65
CDH8-204ENST00000577536 CNNM2Q9H8M5 875 aa4.76□□□□□ -1.65
CDH8-204ENST00000577536 UBP1Q9NZI7 540 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms