RNA–Protein interactions for RNA: ENST00000577396.5

SUPT4H1-202, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2 BASIC

Gene SUPT4H1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-202ENST00000577396 VCAM1P19320 739 aa23.6■■□□□ 1.37
SUPT4H1-202ENST00000577396 HSPA4P34932 840 aa23.6■■□□□ 1.37
SUPT4H1-202ENST00000577396 CRHR2Q13324 411 aa23.6■■□□□ 1.37
SUPT4H1-202ENST00000577396 PPP4R3BQ5MIZ7 849 aa23.6■■□□□ 1.37
SUPT4H1-202ENST00000577396 CYB5R4Q7L1T6 521 aa23.6■■□□□ 1.37
SUPT4H1-202ENST00000577396 TTC14Q96N46 770 aa23.6■■□□□ 1.37
SUPT4H1-202ENST00000577396 TRDNQ13061 729 aa23.59■■□□□ 1.37
SUPT4H1-202ENST00000577396 TAF1CQ15572 869 aaPredicted RBP23.59■■□□□ 1.37
SUPT4H1-202ENST00000577396 RNF20Q5VTR2 975 aa23.59■■□□□ 1.37
SUPT4H1-202ENST00000577396 NCOA7Q8NI08 942 aa23.59■■□□□ 1.37
SUPT4H1-202ENST00000577396 LPAR1Q92633 364 aa23.59■■□□□ 1.37
SUPT4H1-202ENST00000577396 TSKSQ9UJT2 592 aa23.59■■□□□ 1.37
SUPT4H1-202ENST00000577396 STX8Q9UNK0 236 aa23.59■■□□□ 1.37
SUPT4H1-202ENST00000577396 F5H6K3 240 aa23.59■■□□□ 1.37
SUPT4H1-202ENST00000577396 CYP2C8P10632 490 aa23.59■■□□□ 1.37
SUPT4H1-202ENST00000577396 KLRC3Q07444 240 aa23.59■■□□□ 1.37
SUPT4H1-202ENST00000577396 COL9A3Q14050 684 aaPredicted RBP23.59■■□□□ 1.37
SUPT4H1-202ENST00000577396 ZKSCAN3Q9BRR0 538 aa23.59■■□□□ 1.37
SUPT4H1-202ENST00000577396 C8orf34Q49A92 452 aa23.58■■□□□ 1.36
SUPT4H1-202ENST00000577396 CATSPERGQ6ZRH7 1159 aa23.58■■□□□ 1.36
SUPT4H1-202ENST00000577396 DGKHQ86XP1 1220 aa23.58■■□□□ 1.36
SUPT4H1-202ENST00000577396 MB21D2Q8IYB1 491 aaPredicted RBP23.58■■□□□ 1.36
SUPT4H1-202ENST00000577396 SPICE1Q8N0Z3 855 aa23.58■■□□□ 1.36
SUPT4H1-202ENST00000577396 ANKS1AQ92625 1134 aa23.58■■□□□ 1.36
SUPT4H1-202ENST00000577396 ASCC2Q9H1I8 757 aaPredicted RBP23.58■■□□□ 1.36
SUPT4H1-202ENST00000577396 ZFYVE28Q9HCC9 887 aa23.58■■□□□ 1.36
SUPT4H1-202ENST00000577396 TLR2O60603 784 aa23.57■■□□□ 1.36
SUPT4H1-202ENST00000577396 SEC24BO95487 1268 aa23.57■■□□□ 1.36
SUPT4H1-202ENST00000577396 HSPA8P11142 646 aaKnown RBP23.57■■□□□ 1.36
SUPT4H1-202ENST00000577396 PABPC4Q13310 644 aaKnown RBP eCLIP23.57■■□□□ 1.361e-6■■■□□ 17.9
SUPT4H1-202ENST00000577396 IQCA1Q86XH1 822 aa23.57■■□□□ 1.36
SUPT4H1-202ENST00000577396 LRRC47Q8N1G4 583 aaKnown RBP23.57■■□□□ 1.36
SUPT4H1-202ENST00000577396 GMCL1P1Q8NEA9 526 aa23.57■■□□□ 1.36
SUPT4H1-202ENST00000577396 ZSCAN10Q96SZ4 725 aaPredicted RBP23.57■■□□□ 1.36
SUPT4H1-202ENST00000577396 TMEM47Q9BQJ4 181 aa23.57■■□□□ 1.36
SUPT4H1-202ENST00000577396 GOPCQ9HD26 462 aa23.57■■□□□ 1.36
SUPT4H1-202ENST00000577396 ADGRA2Q96PE1 1338 aa23.56■■□□□ 1.36
SUPT4H1-202ENST00000577396 USP17L15C9J2P7 530 aa23.56■■□□□ 1.36
SUPT4H1-202ENST00000577396 USP17L13C9JLJ4 530 aa23.56■■□□□ 1.36
SUPT4H1-202ENST00000577396 USP17L11C9JVI0 530 aa23.56■■□□□ 1.36
SUPT4H1-202ENST00000577396 USP17L18D6R9N7 530 aa23.56■■□□□ 1.36
SUPT4H1-202ENST00000577396 USP17L22D6RA61 530 aa23.56■■□□□ 1.36
SUPT4H1-202ENST00000577396 USP17L17D6RBQ6 530 aa23.56■■□□□ 1.36
SUPT4H1-202ENST00000577396 USP17L19D6RCP7 530 aa23.56■■□□□ 1.36
SUPT4H1-202ENST00000577396 USP17L20D6RJB6 530 aa23.56■■□□□ 1.36
SUPT4H1-202ENST00000577396 NDUFB10O96000 172 aa23.56■■□□□ 1.36
SUPT4H1-202ENST00000577396 USP17L24Q0WX57 530 aa23.56■■□□□ 1.36
SUPT4H1-202ENST00000577396 MYH4Q9Y623 1939 aa23.56■■□□□ 1.36
SUPT4H1-202ENST00000577396 CTCFP49711 727 aaPredicted RBP23.55■■□□□ 1.36
SUPT4H1-202ENST00000577396 ANTXR2P58335 489 aa23.55■■□□□ 1.36
SUPT4H1-202ENST00000577396 CCDC178Q5BJE1 867 aa23.55■■□□□ 1.36
SUPT4H1-202ENST00000577396 NOM1Q5C9Z4 860 aaKnown RBP23.55■■□□□ 1.36
SUPT4H1-202ENST00000577396 RALYLQ86SE5 291 aaKnown RBP23.55■■□□□ 1.36
SUPT4H1-202ENST00000577396 ENAHQ8N8S7 591 aaPredicted RBP23.55■■□□□ 1.36
SUPT4H1-202ENST00000577396 PARK7Q99497 189 aaKnown RBP23.55■■□□□ 1.36
SUPT4H1-202ENST00000577396 P2RX7Q99572 595 aaKnown RBP23.55■■□□□ 1.36
SUPT4H1-202ENST00000577396 RPAP3Q9H6T3 665 aaPredicted RBP23.55■■□□□ 1.36
SUPT4H1-202ENST00000577396 TOP1P11387 765 aaKnown RBP23.55■■□□□ 1.36
SUPT4H1-202ENST00000577396 ZKSCAN1P17029 563 aaPredicted RBP23.55■■□□□ 1.36
SUPT4H1-202ENST00000577396 OSBPP22059 807 aa23.55■■□□□ 1.36
SUPT4H1-202ENST00000577396 SEC23AQ15436 765 aa23.55■■□□□ 1.36
SUPT4H1-202ENST00000577396 ADCK5Q3MIX3 580 aa23.55■■□□□ 1.36
SUPT4H1-202ENST00000577396 POTEEQ6S8J3 1075 aa23.55■■□□□ 1.36
SUPT4H1-202ENST00000577396 C17orf99Q6UX52 265 aa23.55■■□□□ 1.36
SUPT4H1-202ENST00000577396 PNMA3Q9UL41 463 aa23.55■■□□□ 1.36
SUPT4H1-202ENST00000577396 SNX14Q9Y5W7 946 aa23.55■■□□□ 1.36
SUPT4H1-202ENST00000577396 TNKSO95271 1327 aa23.54■■□□□ 1.36
SUPT4H1-202ENST00000577396 GPR25O00155 361 aa23.54■■□□□ 1.36
SUPT4H1-202ENST00000577396 WDR46O15213 610 aaKnown RBP23.54■■□□□ 1.36
SUPT4H1-202ENST00000577396 CHST3Q7LGC8 479 aa23.54■■□□□ 1.36
SUPT4H1-202ENST00000577396 IGDCC4Q8TDY8 1250 aa23.53■■□□□ 1.36
SUPT4H1-202ENST00000577396 UBAC1Q9BSL1 405 aa23.53■■□□□ 1.36
SUPT4H1-202ENST00000577396 LBX1P52954 281 aa23.52■■□□□ 1.36
SUPT4H1-202ENST00000577396 IRX3P78415 501 aaPredicted RBP23.52■■□□□ 1.36
SUPT4H1-202ENST00000577396 SLFN13Q68D06 897 aa23.52■■□□□ 1.36
SUPT4H1-202ENST00000577396 GMCL1Q96IK5 515 aa23.52■■□□□ 1.36
SUPT4H1-202ENST00000577396 NEK1Q96PY6 1258 aa23.52■■□□□ 1.36
SUPT4H1-202ENST00000577396 NUP88Q99567 741 aaPredicted RBP23.52■■□□□ 1.36
SUPT4H1-202ENST00000577396 RAD21O60216 631 aa23.51■■□□□ 1.35
SUPT4H1-202ENST00000577396 BCRP11274 1271 aa23.51■■□□□ 1.35
SUPT4H1-202ENST00000577396 HERVK_113P62684 666 aa23.51■■□□□ 1.35
SUPT4H1-202ENST00000577396 KRT32Q14532 448 aa23.51■■□□□ 1.35
SUPT4H1-202ENST00000577396 FAM83BQ5T0W9 1011 aa23.51■■□□□ 1.35
SUPT4H1-202ENST00000577396 CPA4Q9UI42 421 aa23.51■■□□□ 1.35
SUPT4H1-202ENST00000577396 EIF5BO60841 1220 aaKnown RBP23.51■■□□□ 1.35
SUPT4H1-202ENST00000577396 MCCP23508 829 aa23.51■■□□□ 1.35
SUPT4H1-202ENST00000577396 MCM5P33992 734 aa23.51■■□□□ 1.35
SUPT4H1-202ENST00000577396 COG2Q14746 738 aa23.51■■□□□ 1.35
SUPT4H1-202ENST00000577396 MTA3Q9BTC8 594 aa23.51■■□□□ 1.35
SUPT4H1-202ENST00000577396 IFIT3O14879 490 aaKnown RBP23.5■■□□□ 1.35
SUPT4H1-202ENST00000577396 EXOSC10Q01780 885 aaKnown RBP23.5■■□□□ 1.35
SUPT4H1-202ENST00000577396 LBX2Q6XYB7 198 aa23.5■■□□□ 1.35
SUPT4H1-202ENST00000577396 SMCR8Q8TEV9 937 aaPredicted RBP23.5■■□□□ 1.35
SUPT4H1-202ENST00000577396 ZNF296Q8WUU4 475 aaPredicted RBP23.5■■□□□ 1.35
SUPT4H1-202ENST00000577396 TANGO6Q9C0B7 1094 aa23.5■■□□□ 1.35
SUPT4H1-202ENST00000577396 SENP2Q9HC62 589 aa23.5■■□□□ 1.35
SUPT4H1-202ENST00000577396 HOXC10Q9NYD6 342 aa23.5■■□□□ 1.35
SUPT4H1-202ENST00000577396 RLFQ13129 1914 aa23.49■■□□□ 1.35
SUPT4H1-202ENST00000577396 PRC1O43663 620 aa23.49■■□□□ 1.35
SUPT4H1-202ENST00000577396 GCLCP48506 637 aaPredicted RBP23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms