RNA–Protein interactions for RNA: ENST00000577169.1

NCBP3-207, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-207ENST00000577169 EFCC1Q9HA90 598 aa18.61■□□□□ 0.57
NCBP3-207ENST00000577169 TOMM22Q9NS69 142 aa18.61■□□□□ 0.57
NCBP3-207ENST00000577169 MTMR4Q9NYA4 1195 aa18.61■□□□□ 0.57
NCBP3-207ENST00000577169 CTNNA3Q9UI47 895 aa18.61■□□□□ 0.57
NCBP3-207ENST00000577169 GREB1LQ9C091 1923 aaPredicted RBP18.61■□□□□ 0.57
NCBP3-207ENST00000577169 TSPY2A6NKD2 308 aa18.6■□□□□ 0.57
NCBP3-207ENST00000577169 GCLCP48506 637 aaPredicted RBP18.6■□□□□ 0.57
NCBP3-207ENST00000577169 RRP12Q5JTH9 1297 aaKnown RBP18.6■□□□□ 0.57
NCBP3-207ENST00000577169 MFSD6Q6ZSS7 791 aa18.6■□□□□ 0.57
NCBP3-207ENST00000577169 SPICE1Q8N0Z3 855 aa18.6■□□□□ 0.57
NCBP3-207ENST00000577169 CTGFP29279 349 aa18.59■□□□□ 0.57
NCBP3-207ENST00000577169 PSMC4P43686 418 aa18.59■□□□□ 0.57
NCBP3-207ENST00000577169 HERVK_113P62684 666 aa18.59■□□□□ 0.57
NCBP3-207ENST00000577169 ARHGEF6Q15052 776 aa18.59■□□□□ 0.57
NCBP3-207ENST00000577169 PKN2Q16513 984 aaKnown RBP18.59■□□□□ 0.57
NCBP3-207ENST00000577169 TBC1D10CQ8IV04 446 aa18.59■□□□□ 0.57
NCBP3-207ENST00000577169 STAG1Q8WVM7 1258 aa18.59■□□□□ 0.57
NCBP3-207ENST00000577169 MKL1Q969V6 931 aa18.59■□□□□ 0.57
NCBP3-207ENST00000577169 IL17RBQ9NRM6 502 aa18.59■□□□□ 0.57
NCBP3-207ENST00000577169 RAD21O60216 631 aa18.58■□□□□ 0.56
NCBP3-207ENST00000577169 PEX10O60683 326 aa18.58■□□□□ 0.56
NCBP3-207ENST00000577169 IMMTQ16891 758 aaKnown RBP18.58■□□□□ 0.56
NCBP3-207ENST00000577169 POTEEQ6S8J3 1075 aa18.58■□□□□ 0.56
NCBP3-207ENST00000577169 NKX2-3Q8TAU0 364 aa18.58■□□□□ 0.56
NCBP3-207ENST00000577169 LPAR1Q92633 364 aa18.58■□□□□ 0.56
NCBP3-207ENST00000577169 RNF41Q9H4P4 317 aaPredicted RBP18.58■□□□□ 0.56
NCBP3-207ENST00000577169 GOPCQ9HD26 462 aa18.58■□□□□ 0.56
NCBP3-207ENST00000577169 RBPJLQ9UBG7 517 aa18.58■□□□□ 0.56
NCBP3-207ENST00000577169 F5H6K3 240 aa18.57■□□□□ 0.56
NCBP3-207ENST00000577169 NMT2O60551 498 aa18.57■□□□□ 0.56
NCBP3-207ENST00000577169 FMNL1O95466 1100 aaPredicted RBP18.57■□□□□ 0.56
NCBP3-207ENST00000577169 TTLL1O95922 423 aa18.57■□□□□ 0.56
NCBP3-207ENST00000577169 KLRC3Q07444 240 aa18.57■□□□□ 0.56
NCBP3-207ENST00000577169 COG2Q14746 738 aa18.57■□□□□ 0.56
NCBP3-207ENST00000577169 TRIM47Q96LD4 638 aa18.57■□□□□ 0.56
NCBP3-207ENST00000577169 ESYT1Q9BSJ8 1104 aa18.57■□□□□ 0.56
NCBP3-207ENST00000577169 TXNRD2Q9NNW7 524 aa18.57■□□□□ 0.56
NCBP3-207ENST00000577169 PLIN4Q96Q06 1357 aa18.56■□□□□ 0.56
NCBP3-207ENST00000577169 WDR46O15213 610 aaKnown RBP18.56■□□□□ 0.56
NCBP3-207ENST00000577169 PCP11498 1178 aaKnown RBP18.56■□□□□ 0.56
NCBP3-207ENST00000577169 FAM110CQ1W6H9 321 aa18.56■□□□□ 0.56
NCBP3-207ENST00000577169 Q3C1V9 767 aa18.56■□□□□ 0.56
NCBP3-207ENST00000577169 FBXO46Q6PJ61 603 aaPredicted RBP18.56■□□□□ 0.56
NCBP3-207ENST00000577169 KIAA1211Q6ZU35 1233 aa18.56■□□□□ 0.56
NCBP3-207ENST00000577169 MAP4K1Q92918 833 aa18.56■□□□□ 0.56
NCBP3-207ENST00000577169 ABHD8Q96I13 439 aa18.56■□□□□ 0.56
NCBP3-207ENST00000577169 TANGO6Q9C0B7 1094 aa18.56■□□□□ 0.56
NCBP3-207ENST00000577169 HOXC10Q9NYD6 342 aa18.56■□□□□ 0.56
NCBP3-207ENST00000577169 MORF4L1Q9UBU8 362 aa18.56■□□□□ 0.56
NCBP3-207ENST00000577169 PTPN22Q9Y2R2 807 aa18.56■□□□□ 0.56
NCBP3-207ENST00000577169 U3KPZ7 1027 aaPredicted RBP18.56■□□□□ 0.56
NCBP3-207ENST00000577169 ZSWIM8A7E2V4 1837 aa18.56■□□□□ 0.56
NCBP3-207ENST00000577169 MYH4Q9Y623 1939 aa18.55■□□□□ 0.56
NCBP3-207ENST00000577169 FCGRTP55899 365 aa18.55■□□□□ 0.56
NCBP3-207ENST00000577169 LRRC47Q8N1G4 583 aaKnown RBP18.55■□□□□ 0.56
NCBP3-207ENST00000577169 GPRC5AQ8NFJ5 357 aa18.55■□□□□ 0.56
NCBP3-207ENST00000577169 PAGR1Q9BTK6 254 aa18.55■□□□□ 0.56
NCBP3-207ENST00000577169 TCP11L1Q9NUJ3 509 aa18.55■□□□□ 0.56
NCBP3-207ENST00000577169 NEDD4P46934 1319 aa18.54■□□□□ 0.56
NCBP3-207ENST00000577169 CNMDO75829 334 aa18.54■□□□□ 0.56
NCBP3-207ENST00000577169 NDUFB10O96000 172 aa18.54■□□□□ 0.56
NCBP3-207ENST00000577169 GNRH1P01148 92 aa18.54■□□□□ 0.56
NCBP3-207ENST00000577169 HOXD10P28358 340 aa18.54■□□□□ 0.56
NCBP3-207ENST00000577169 DSG3P32926 999 aa18.54■□□□□ 0.56
NCBP3-207ENST00000577169 PPP4R3BQ5MIZ7 849 aa18.54■□□□□ 0.56
NCBP3-207ENST00000577169 FAM83BQ5T0W9 1011 aa18.54■□□□□ 0.56
NCBP3-207ENST00000577169 GTF3C2Q8WUA4 911 aaPredicted RBP18.54■□□□□ 0.56
NCBP3-207ENST00000577169 ESR2Q92731 530 aa18.54■□□□□ 0.56
NCBP3-207ENST00000577169 NUP88Q99567 741 aaPredicted RBP18.54■□□□□ 0.56
NCBP3-207ENST00000577169 STX8Q9UNK0 236 aa18.54■□□□□ 0.56
NCBP3-207ENST00000577169 RABGAP1Q9Y3P9 1069 aa18.54■□□□□ 0.56
NCBP3-207ENST00000577169 SPDYE16A6NNV3 312 aaPredicted RBP18.53■□□□□ 0.56
NCBP3-207ENST00000577169 B4E1Z4 1266 aa18.53■□□□□ 0.56
NCBP3-207ENST00000577169 MGAMO43451 1857 aa18.53■□□□□ 0.56
NCBP3-207ENST00000577169 CDC45O75419 566 aa18.53■□□□□ 0.56
NCBP3-207ENST00000577169 FLOT1O75955 427 aa18.53■□□□□ 0.56
NCBP3-207ENST00000577169 NOVP48745 357 aa18.53■□□□□ 0.56
NCBP3-207ENST00000577169 ERVK-9P63128 1117 aa18.53■□□□□ 0.56
NCBP3-207ENST00000577169 ERVK-24P63145 666 aa18.53■□□□□ 0.56
NCBP3-207ENST00000577169 SLFN13Q68D06 897 aa18.53■□□□□ 0.56
NCBP3-207ENST00000577169 SAMD1Q6SPF0 538 aaPredicted RBP18.53■□□□□ 0.56
NCBP3-207ENST00000577169 LBX2Q6XYB7 198 aa18.53■□□□□ 0.56
NCBP3-207ENST00000577169 LSG1Q9H089 658 aaKnown RBP18.53■□□□□ 0.56
NCBP3-207ENST00000577169 FBXO28Q9NVF7 368 aa18.53■□□□□ 0.56
NCBP3-207ENST00000577169 BTBD7Q9P203 1132 aa18.53■□□□□ 0.56
NCBP3-207ENST00000577169 SRRDQ9UH36 339 aa18.53■□□□□ 0.56
NCBP3-207ENST00000577169 SYNPO2Q9UMS6 1093 aa18.53■□□□□ 0.56
NCBP3-207ENST00000577169 HPS5Q9UPZ3 1129 aa18.53■□□□□ 0.56
NCBP3-207ENST00000577169 RBM8AQ9Y5S9 174 aaKnown RBP18.53■□□□□ 0.56
NCBP3-207ENST00000577169 LAMA4Q16363 1823 aa18.52■□□□□ 0.56
NCBP3-207ENST00000577169 KDM4AO75164 1064 aa18.52■□□□□ 0.56
NCBP3-207ENST00000577169 CYP21A2P08686 494 aa18.52■□□□□ 0.56
NCBP3-207ENST00000577169 GMCL1P1Q8NEA9 526 aa18.52■□□□□ 0.56
NCBP3-207ENST00000577169 CHMP4CQ96CF2 233 aa18.52■□□□□ 0.56
NCBP3-207ENST00000577169 ZKSCAN3Q9BRR0 538 aa18.52■□□□□ 0.56
NCBP3-207ENST00000577169 ZSWIM5Q9P217 1185 aa18.52■□□□□ 0.56
NCBP3-207ENST00000577169 GABRQQ9UN88 632 aa18.52■□□□□ 0.56
NCBP3-207ENST00000577169 RLFQ13129 1914 aa18.51■□□□□ 0.55
NCBP3-207ENST00000577169 TNPO2O14787 897 aaKnown RBP18.51■□□□□ 0.55
NCBP3-207ENST00000577169 PRMT2P55345 433 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms