RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 ZBTB40Q9NUA8 1239 aa14.59□□□□□ -0.07
PRPF8-215ENST00000576958 MYH8P13535 1937 aa14.58□□□□□ -0.07
PRPF8-215ENST00000576958 COL11A1P12107 1806 aaPredicted RBP14.58□□□□□ -0.08
PRPF8-215ENST00000576958 IGHA2P01877 340 aa14.58□□□□□ -0.08
PRPF8-215ENST00000576958 GRB14Q14449 540 aa14.58□□□□□ -0.08
PRPF8-215ENST00000576958 TSHZ3Q63HK5 1081 aa14.58□□□□□ -0.08
PRPF8-215ENST00000576958 ATG4CQ96DT6 458 aa14.58□□□□□ -0.08
PRPF8-215ENST00000576958 CRNKL1Q9BZJ0 848 aaKnown RBP14.58□□□□□ -0.08
PRPF8-215ENST00000576958 TANGO6Q9C0B7 1094 aa14.58□□□□□ -0.08
PRPF8-215ENST00000576958 CWC22Q9HCG8 908 aaKnown RBP14.58□□□□□ -0.08
PRPF8-215ENST00000576958 CABP5Q9NP86 173 aa14.58□□□□□ -0.08
PRPF8-215ENST00000576958 IFIT2P09913 472 aaKnown RBP14.57□□□□□ -0.08
PRPF8-215ENST00000576958 CNGA1P29973 690 aa14.57□□□□□ -0.08
PRPF8-215ENST00000576958 ADD2P35612 726 aa14.57□□□□□ -0.08
PRPF8-215ENST00000576958 GJC2Q5T442 439 aaPredicted RBP14.57□□□□□ -0.08
PRPF8-215ENST00000576958 LBX2Q6XYB7 198 aa14.57□□□□□ -0.08
PRPF8-215ENST00000576958 STK11IPQ8N1F8 1099 aa14.57□□□□□ -0.08
PRPF8-215ENST00000576958 KIF1BPQ96EK5 621 aa14.57□□□□□ -0.08
PRPF8-215ENST00000576958 SENP6Q9GZR1 1112 aaPredicted RBP14.57□□□□□ -0.08
PRPF8-215ENST00000576958 FBXO28Q9NVF7 368 aa14.57□□□□□ -0.08
PRPF8-215ENST00000576958 PAG1Q9NWQ8 432 aa14.57□□□□□ -0.08
PRPF8-215ENST00000576958 EYSQ5T1H1 3165 aa14.56□□□□□ -0.08
PRPF8-215ENST00000576958 SLC15A5A6NIM6 579 aa14.56□□□□□ -0.08
PRPF8-215ENST00000576958 CYBAP13498 195 aa14.56□□□□□ -0.08
PRPF8-215ENST00000576958 ERCC3P19447 782 aa14.56□□□□□ -0.08
PRPF8-215ENST00000576958 ADORA2AP29274 412 aa14.56□□□□□ -0.08
PRPF8-215ENST00000576958 BMP8BP34820 402 aa14.56□□□□□ -0.08
PRPF8-215ENST00000576958 USP14P54578 494 aa14.56□□□□□ -0.08
PRPF8-215ENST00000576958 CLASRPQ8N2M8 674 aaKnown RBP14.56□□□□□ -0.08
PRPF8-215ENST00000576958 PUS7LQ9H0K6 701 aaKnown RBP14.56□□□□□ -0.08
PRPF8-215ENST00000576958 DDX20Q9UHI6 824 aaKnown RBP14.56□□□□□ -0.08
PRPF8-215ENST00000576958 MYH7P12883 1935 aa14.56□□□□□ -0.08
PRPF8-215ENST00000576958 USP17L12C9JPN9 530 aa14.55□□□□□ -0.08
PRPF8-215ENST00000576958 USP17L21D6R901 530 aa14.55□□□□□ -0.08
PRPF8-215ENST00000576958 ATP2B2Q01814 1243 aa14.55□□□□□ -0.08
PRPF8-215ENST00000576958 PLS1Q14651 629 aa14.55□□□□□ -0.08
PRPF8-215ENST00000576958 TTF1Q15361 905 aaPredicted RBP14.55□□□□□ -0.08
PRPF8-215ENST00000576958 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.55□□□□□ -0.08
PRPF8-215ENST00000576958 GTF3C2Q8WUA4 911 aaPredicted RBP14.55□□□□□ -0.08
PRPF8-215ENST00000576958 LENG1Q96BZ8 264 aaPredicted RBP14.55□□□□□ -0.08
PRPF8-215ENST00000576958 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.55□□□□□ -0.08
PRPF8-215ENST00000576958 UBE2OQ9C0C9 1292 aaKnown RBP14.55□□□□□ -0.08
PRPF8-215ENST00000576958 SPATC1LQ9H0A9 340 aa14.55□□□□□ -0.08
PRPF8-215ENST00000576958 LTBP2Q14767 1821 aa14.55□□□□□ -0.08
PRPF8-215ENST00000576958 ZNF236Q9UL36 1845 aa14.55□□□□□ -0.08
PRPF8-215ENST00000576958 UNC80Q8N2C7 3258 aa14.54□□□□□ -0.08
PRPF8-215ENST00000576958 A0A1W2PPC1 479 aa14.54□□□□□ -0.08
PRPF8-215ENST00000576958 IGSF3O75054 1194 aa14.54□□□□□ -0.08
PRPF8-215ENST00000576958 MYCNP04198 464 aaPredicted RBP14.54□□□□□ -0.08
PRPF8-215ENST00000576958 HOXC6P09630 235 aa14.54□□□□□ -0.08
PRPF8-215ENST00000576958 CDK8P49336 464 aa14.54□□□□□ -0.08
PRPF8-215ENST00000576958 CCNA1P78396 465 aa14.54□□□□□ -0.08
PRPF8-215ENST00000576958 COG2Q14746 738 aa14.54□□□□□ -0.08
PRPF8-215ENST00000576958 TMEM132BQ14DG7 1078 aa14.54□□□□□ -0.08
PRPF8-215ENST00000576958 MFSD14CQ5VZR4 134 aa14.54□□□□□ -0.08
PRPF8-215ENST00000576958 TDHQ8IZJ6 230 aa14.54□□□□□ -0.08
PRPF8-215ENST00000576958 DEFB123Q8N688 67 aa14.54□□□□□ -0.08
PRPF8-215ENST00000576958 NUP88Q99567 741 aaPredicted RBP14.54□□□□□ -0.08
PRPF8-215ENST00000576958 HAUS7Q99871 368 aa14.54□□□□□ -0.08
PRPF8-215ENST00000576958 FLOT1O75955 427 aa14.53□□□□□ -0.08
PRPF8-215ENST00000576958 PGK2P07205 417 aa14.53□□□□□ -0.08
PRPF8-215ENST00000576958 EEF2P13639 858 aaKnown RBP14.53□□□□□ -0.08
PRPF8-215ENST00000576958 TAL1P17542 331 aaPredicted RBP14.53□□□□□ -0.08
PRPF8-215ENST00000576958 ATP5JP18859 108 aa14.53□□□□□ -0.08
PRPF8-215ENST00000576958 DSG3P32926 999 aa14.53□□□□□ -0.08
PRPF8-215ENST00000576958 ICA1Q05084 483 aa14.53□□□□□ -0.08
PRPF8-215ENST00000576958 HSP90AB4PQ58FF6 505 aa14.53□□□□□ -0.08
PRPF8-215ENST00000576958 C12orf60Q5U649 245 aa14.53□□□□□ -0.08
PRPF8-215ENST00000576958 CTR9Q6PD62 1173 aa14.53□□□□□ -0.08
PRPF8-215ENST00000576958 TMEM179Q6ZVK1 233 aa14.53□□□□□ -0.08
PRPF8-215ENST00000576958 CERS3Q8IU89 383 aa14.53□□□□□ -0.08
PRPF8-215ENST00000576958 RPAP2Q8IXW5 612 aaPredicted RBP14.53□□□□□ -0.08
PRPF8-215ENST00000576958 TRMT44Q8IYL2 757 aaKnown RBP14.53□□□□□ -0.08
PRPF8-215ENST00000576958 IVNS1ABPQ9Y6Y0 642 aa14.53□□□□□ -0.08
PRPF8-215ENST00000576958 ZNFX1Q9P2E3 1918 aaKnown RBP14.53□□□□□ -0.08
PRPF8-215ENST00000576958 SH3RF1Q7Z6J0 888 aa14.52□□□□□ -0.09
PRPF8-215ENST00000576958 DPP9Q86TI2 863 aa14.52□□□□□ -0.09
PRPF8-215ENST00000576958 NCAPG2Q86XI2 1143 aa14.52□□□□□ -0.09
PRPF8-215ENST00000576958 SLC17A8Q8NDX2 589 aa14.52□□□□□ -0.09
PRPF8-215ENST00000576958 FERMT2Q96AC1 680 aa14.52□□□□□ -0.09
PRPF8-215ENST00000576958 FAM161BQ96MY7 647 aa14.52□□□□□ -0.09
PRPF8-215ENST00000576958 VCPKMTQ9H867 229 aa14.52□□□□□ -0.09
PRPF8-215ENST00000576958 DDX19BQ9UMR2 479 aa14.52□□□□□ -0.09
PRPF8-215ENST00000576958 TMX2Q9Y320 296 aa14.52□□□□□ -0.09
PRPF8-215ENST00000576958 SLC4A4Q9Y6R1 1079 aa14.52□□□□□ -0.09
PRPF8-215ENST00000576958 GREB1LQ9C091 1923 aaPredicted RBP14.52□□□□□ -0.09
PRPF8-215ENST00000576958 CDH23Q9H251 3354 aa14.51□□□□□ -0.09
PRPF8-215ENST00000576958 SMCHD1A6NHR9 2005 aa14.51□□□□□ -0.09
PRPF8-215ENST00000576958 RAD21O60216 631 aa14.51□□□□□ -0.09
PRPF8-215ENST00000576958 RTP1P59025 263 aa14.51□□□□□ -0.09
PRPF8-215ENST00000576958 IRX5P78411 483 aaPredicted RBP14.51□□□□□ -0.09
PRPF8-215ENST00000576958 LRIT3Q3SXY7 679 aa14.51□□□□□ -0.09
PRPF8-215ENST00000576958 FAM47AQ5JRC9 791 aa14.51□□□□□ -0.09
PRPF8-215ENST00000576958 C16orf86Q6ZW13 317 aa14.51□□□□□ -0.09
PRPF8-215ENST00000576958 LPAR1Q92633 364 aa14.51□□□□□ -0.09
PRPF8-215ENST00000576958 ATP11BQ9Y2G3 1177 aa14.51□□□□□ -0.09
PRPF8-215ENST00000576958 RAB11FIP3O75154 756 aa14.5□□□□□ -0.09
PRPF8-215ENST00000576958 GLRX3O76003 335 aaKnown RBP14.5□□□□□ -0.09
PRPF8-215ENST00000576958 CAPN2P17655 700 aa14.5□□□□□ -0.09
PRPF8-215ENST00000576958 TRIM60Q495X7 471 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms