RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 EIF5BO60841 1220 aaKnown RBP7.84□□□□□ -1.15
NUP88-212ENST00000576708 NF2P35240 595 aa7.84□□□□□ -1.15
NUP88-212ENST00000576708 TLR1Q15399 786 aa7.84□□□□□ -1.15
NUP88-212ENST00000576708 GRIK5Q16478 980 aa7.84□□□□□ -1.15
NUP88-212ENST00000576708 LRRC24Q50LG9 513 aa7.84□□□□□ -1.15
NUP88-212ENST00000576708 TMEM164Q5U3C3 297 aa7.84□□□□□ -1.15
NUP88-212ENST00000576708 ZNF804AQ7Z570 1209 aa7.84□□□□□ -1.15
NUP88-212ENST00000576708 APOBEC3FQ8IUX4 373 aaKnown RBP7.84□□□□□ -1.15
NUP88-212ENST00000576708 RETREG2Q8NC44 543 aa7.84□□□□□ -1.15
NUP88-212ENST00000576708 KLHDC4Q8TBB5 520 aa7.84□□□□□ -1.15
NUP88-212ENST00000576708 HINFPQ9BQA5 517 aa7.84□□□□□ -1.15
NUP88-212ENST00000576708 DEFB129Q9H1M3 183 aa7.84□□□□□ -1.15
NUP88-212ENST00000576708 R3HDMLQ9H3Y0 253 aa7.84□□□□□ -1.15
NUP88-212ENST00000576708 VEZTQ9HBM0 779 aa7.84□□□□□ -1.15
NUP88-212ENST00000576708 ANGEL1Q9UNK9 670 aaKnown RBP7.84□□□□□ -1.15
NUP88-212ENST00000576708 IQSEC3Q9UPP2 1182 aaPredicted RBP7.84□□□□□ -1.15
NUP88-212ENST00000576708 HRH3Q9Y5N1 445 aa7.84□□□□□ -1.15
NUP88-212ENST00000576708 SSC5DA1L4H1 1573 aa7.84□□□□□ -1.15
NUP88-212ENST00000576708 CACNA1FO60840 1977 aa7.83□□□□□ -1.16
NUP88-212ENST00000576708 TTLL8A6PVC2 850 aa7.83□□□□□ -1.16
NUP88-212ENST00000576708 RBM5P52756 815 aaKnown RBP eCLIP7.83□□□□□ -1.16
NUP88-212ENST00000576708 SOX10P56693 466 aa7.83□□□□□ -1.16
NUP88-212ENST00000576708 ELOAQ14241 798 aaKnown RBP7.83□□□□□ -1.16
NUP88-212ENST00000576708 TBCELQ5QJ74 424 aa7.83□□□□□ -1.16
NUP88-212ENST00000576708 LDLRAD1Q5T700 205 aa7.83□□□□□ -1.16
NUP88-212ENST00000576708 NBPF12Q5TAG4 269 aaPredicted RBP7.83□□□□□ -1.16
NUP88-212ENST00000576708 ARMC9Q7Z3E5 817 aa7.83□□□□□ -1.16
NUP88-212ENST00000576708 ANKRD44Q8N8A2 993 aa7.83□□□□□ -1.16
NUP88-212ENST00000576708 TDRD7Q8NHU6 1098 aaKnown RBP7.83□□□□□ -1.16
NUP88-212ENST00000576708 SSH1Q8WYL5 1049 aa7.83□□□□□ -1.16
NUP88-212ENST00000576708 CLMNQ96JQ2 1002 aa7.83□□□□□ -1.16
NUP88-212ENST00000576708 FAM84BQ96KN1 310 aaPredicted RBP7.83□□□□□ -1.16
NUP88-212ENST00000576708 BICC1Q9H694 974 aaKnown RBP7.83□□□□□ -1.16
NUP88-212ENST00000576708 RIPOR2Q9Y4F9 1068 aa7.83□□□□□ -1.16
NUP88-212ENST00000576708 FAM205AQ6ZU69 1335 aa7.82□□□□□ -1.16
NUP88-212ENST00000576708 AKAP11Q9UKA4 1901 aa7.82□□□□□ -1.16
NUP88-212ENST00000576708 BACH1O14867 736 aa7.82□□□□□ -1.16
NUP88-212ENST00000576708 HIBADHP31937 336 aaKnown RBP7.82□□□□□ -1.16
NUP88-212ENST00000576708 TM4SF4P48230 202 aa7.82□□□□□ -1.16
NUP88-212ENST00000576708 RGS19P49795 217 aa7.82□□□□□ -1.16
NUP88-212ENST00000576708 RNF144AP50876 292 aaPredicted RBP7.82□□□□□ -1.16
NUP88-212ENST00000576708 SMTNP53814 917 aa7.82□□□□□ -1.16
NUP88-212ENST00000576708 MLLT1Q03111 559 aaPredicted RBP7.82□□□□□ -1.16
NUP88-212ENST00000576708 CHAF1AQ13111 956 aaPredicted RBP7.82□□□□□ -1.16
NUP88-212ENST00000576708 PRICKLE2Q7Z3G6 844 aa7.82□□□□□ -1.16
NUP88-212ENST00000576708 RNF217Q8TC41 542 aa7.82□□□□□ -1.16
NUP88-212ENST00000576708 ZNF296Q8WUU4 475 aaPredicted RBP7.82□□□□□ -1.16
NUP88-212ENST00000576708 TDRD3Q9H7E2 651 aaKnown RBP7.82□□□□□ -1.16
NUP88-212ENST00000576708 USP3Q9Y6I4 520 aa7.82□□□□□ -1.16
NUP88-212ENST00000576708 UTYO14607 1347 aa7.81□□□□□ -1.16
NUP88-212ENST00000576708 A6NJY4 79 aa7.81□□□□□ -1.16
NUP88-212ENST00000576708 GPR25O00155 361 aa7.81□□□□□ -1.16
NUP88-212ENST00000576708 USP2O75604 605 aaPredicted RBP7.81□□□□□ -1.16
NUP88-212ENST00000576708 SNRPBP14678 240 aaKnown RBP7.81□□□□□ -1.16
NUP88-212ENST00000576708 MMP14P50281 582 aa7.81□□□□□ -1.16
NUP88-212ENST00000576708 FKBP1AP62942 108 aaKnown RBP7.81□□□□□ -1.16
NUP88-212ENST00000576708 SLFN5Q08AF3 891 aa7.81□□□□□ -1.16
NUP88-212ENST00000576708 UBE4AQ14139 1066 aa7.81□□□□□ -1.16
NUP88-212ENST00000576708 RASA3Q14644 834 aa7.81□□□□□ -1.16
NUP88-212ENST00000576708 RABL6Q3YEC7 729 aaPredicted RBP7.81□□□□□ -1.16
NUP88-212ENST00000576708 METTL24Q5JXM2 366 aa7.81□□□□□ -1.16
NUP88-212ENST00000576708 MFSD14BQ5SR56 506 aa7.81□□□□□ -1.16
NUP88-212ENST00000576708 FBXO33Q7Z6M2 555 aa7.81□□□□□ -1.16
NUP88-212ENST00000576708 CTU1Q7Z7A3 348 aaKnown RBP7.81□□□□□ -1.16
NUP88-212ENST00000576708 ZSCAN10Q96SZ4 725 aaPredicted RBP7.81□□□□□ -1.16
NUP88-212ENST00000576708 USP44Q9H0E7 712 aa7.81□□□□□ -1.16
NUP88-212ENST00000576708 ZNF70Q9UC06 446 aaPredicted RBP7.81□□□□□ -1.16
NUP88-212ENST00000576708 DNMT3LQ9UJW3 386 aa7.81□□□□□ -1.16
NUP88-212ENST00000576708 TTF2Q9UNY4 1162 aaKnown RBP7.81□□□□□ -1.16
NUP88-212ENST00000576708 MROH5Q6ZUA9 1318 aa7.8□□□□□ -1.16
NUP88-212ENST00000576708 TCP10L2B9ZVM9 353 aa7.8□□□□□ -1.16
NUP88-212ENST00000576708 E9PSI1 815 aa7.8□□□□□ -1.16
NUP88-212ENST00000576708 IGF2BP3O00425 579 aaKnown RBP eCLIP7.8□□□□□ -1.16
NUP88-212ENST00000576708 MYO1BO43795 1136 aa7.8□□□□□ -1.16
NUP88-212ENST00000576708 MAN1A2O60476 641 aa7.8□□□□□ -1.16
NUP88-212ENST00000576708 RHOQP17081 205 aa7.8□□□□□ -1.16
NUP88-212ENST00000576708 CACNB3P54284 484 aa7.8□□□□□ -1.16
NUP88-212ENST00000576708 EPHA4P54764 986 aa7.8□□□□□ -1.16
NUP88-212ENST00000576708 MAP3K11Q16584 847 aa7.8□□□□□ -1.16
NUP88-212ENST00000576708 TMEM214Q6NUQ4 689 aaKnown RBP7.8□□□□□ -1.16
NUP88-212ENST00000576708 VGLL2Q8N8G2 317 aa7.8□□□□□ -1.16
NUP88-212ENST00000576708 WNK4Q96J92 1243 aa7.8□□□□□ -1.16
NUP88-212ENST00000576708 GRIP2Q9C0E4 1043 aa7.8□□□□□ -1.16
NUP88-212ENST00000576708 COL1A1P02452 1464 aaPredicted RBP7.8□□□□□ -1.16
NUP88-212ENST00000576708 PTPRCP08575 1304 aa7.79□□□□□ -1.16
NUP88-212ENST00000576708 PPP1R12BO60237 982 aaPredicted RBP7.79□□□□□ -1.16
NUP88-212ENST00000576708 PDE8BO95263 885 aa7.79□□□□□ -1.16
NUP88-212ENST00000576708 PHKA2P46019 1235 aa7.79□□□□□ -1.16
NUP88-212ENST00000576708 CRKP46108 304 aa7.79□□□□□ -1.16
NUP88-212ENST00000576708 RFX5P48382 616 aaPredicted RBP7.79□□□□□ -1.16
NUP88-212ENST00000576708 SREBF2Q12772 1141 aa7.79□□□□□ -1.16
NUP88-212ENST00000576708 POU4F2Q12837 409 aa7.79□□□□□ -1.16
NUP88-212ENST00000576708 SUPT20HL1Q3ZLR7 823 aa7.79□□□□□ -1.16
NUP88-212ENST00000576708 VPS37DQ86XT2 251 aa7.79□□□□□ -1.16
NUP88-212ENST00000576708 SLC9A9Q8IVB4 645 aa7.79□□□□□ -1.16
NUP88-212ENST00000576708 DZIP1LQ8IYY4 767 aaKnown RBP7.79□□□□□ -1.16
NUP88-212ENST00000576708 TRIM47Q96LD4 638 aa7.79□□□□□ -1.16
NUP88-212ENST00000576708 PRIMPOLQ96LW4 560 aa7.79□□□□□ -1.16
NUP88-212ENST00000576708 TEPSINQ96N21 525 aa7.79□□□□□ -1.16
NUP88-212ENST00000576708 TMEM39BQ9GZU3 492 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms