RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 CCDC151A5D8V7 595 aa19.94■□□□□ 0.78
ATPAF1-214ENST00000576409 GBP6Q6ZN66 633 aa19.94■□□□□ 0.78
ATPAF1-214ENST00000576409 MAPKAPK5Q8IW41 473 aa19.94■□□□□ 0.78
ATPAF1-214ENST00000576409 UHMK1Q8TAS1 419 aaKnown RBP19.94■□□□□ 0.78
ATPAF1-214ENST00000576409 SNX29Q8TEQ0 813 aa19.94■□□□□ 0.78
ATPAF1-214ENST00000576409 SEC31BQ9NQW1 1179 aa19.94■□□□□ 0.78
ATPAF1-214ENST00000576409 ACTN2P35609 894 aa19.94■□□□□ 0.78
ATPAF1-214ENST00000576409 IFI16Q16666 785 aaKnown RBP19.94■□□□□ 0.78
ATPAF1-214ENST00000576409 NOX5Q96PH1 765 aa19.94■□□□□ 0.78
ATPAF1-214ENST00000576409 TAOK3Q9H2K8 898 aa19.94■□□□□ 0.78
ATPAF1-214ENST00000576409 ABCC3O15438 1527 aa19.94■□□□□ 0.78
ATPAF1-214ENST00000576409 VIMP08670 466 aaKnown RBP19.94■□□□□ 0.78
ATPAF1-214ENST00000576409 SCARF1Q14162 830 aa19.94■□□□□ 0.78
ATPAF1-214ENST00000576409 MSL1Q68DK7 614 aa19.94■□□□□ 0.78
ATPAF1-214ENST00000576409 TULP4Q9NRJ4 1543 aa19.93■□□□□ 0.78
ATPAF1-214ENST00000576409 IQSEC2Q5JU85 1478 aa19.93■□□□□ 0.78
ATPAF1-214ENST00000576409 GOLGA5Q8TBA6 731 aa19.93■□□□□ 0.78
ATPAF1-214ENST00000576409 KCNK9Q9NPC2 374 aa19.93■□□□□ 0.78
ATPAF1-214ENST00000576409 BIN2Q9UBW5 565 aaPredicted RBP19.93■□□□□ 0.78
ATPAF1-214ENST00000576409 PPP1R1BQ9UD71 204 aaPredicted RBP19.93■□□□□ 0.78
ATPAF1-214ENST00000576409 E7EVH7 732 aa19.93■□□□□ 0.78
ATPAF1-214ENST00000576409 RNF40O75150 1001 aa19.93■□□□□ 0.78
ATPAF1-214ENST00000576409 ARFGAP2Q8N6H7 521 aa19.93■□□□□ 0.78
ATPAF1-214ENST00000576409 CCDC155Q8N6L0 562 aa19.93■□□□□ 0.78
ATPAF1-214ENST00000576409 PIH1D3Q9NQM4 214 aaKnown RBP19.93■□□□□ 0.78
ATPAF1-214ENST00000576409 CAPN7Q9Y6W3 813 aa19.93■□□□□ 0.78
ATPAF1-214ENST00000576409 MORC2Q9Y6X9 1032 aaPredicted RBP19.93■□□□□ 0.78
ATPAF1-214ENST00000576409 ABCA6Q8N139 1617 aa19.93■□□□□ 0.78
ATPAF1-214ENST00000576409 RIMBP2O15034 1052 aa19.93■□□□□ 0.78
ATPAF1-214ENST00000576409 RPN1P04843 607 aaKnown RBP19.93■□□□□ 0.78
ATPAF1-214ENST00000576409 PARP1P09874 1014 aaKnown RBP19.93■□□□□ 0.78
ATPAF1-214ENST00000576409 CETN1Q12798 172 aa19.93■□□□□ 0.78
ATPAF1-214ENST00000576409 CC2D1AQ6P1N0 951 aaPredicted RBP19.93■□□□□ 0.78
ATPAF1-214ENST00000576409 HAUS4Q9H6D7 363 aa19.93■□□□□ 0.78
ATPAF1-214ENST00000576409 PRR29P0C7W0 189 aa19.92■□□□□ 0.78
ATPAF1-214ENST00000576409 CDC27P30260 824 aa19.92■□□□□ 0.78
ATPAF1-214ENST00000576409 SLC7A5Q01650 507 aa19.92■□□□□ 0.78
ATPAF1-214ENST00000576409 CASP8Q14790 479 aa19.92■□□□□ 0.78
ATPAF1-214ENST00000576409 NBPF14Q5TI25 921 aa19.92■□□□□ 0.78
ATPAF1-214ENST00000576409 PNMA8AQ86V59 439 aaPredicted RBP19.92■□□□□ 0.78
ATPAF1-214ENST00000576409 CUL5Q93034 780 aa19.92■□□□□ 0.78
ATPAF1-214ENST00000576409 TUBB2AQ13885 445 aa19.92■□□□□ 0.78
ATPAF1-214ENST00000576409 TBC1D10CQ8IV04 446 aa19.92■□□□□ 0.78
ATPAF1-214ENST00000576409 GSPT2Q8IYD1 628 aaKnown RBP19.92■□□□□ 0.78
ATPAF1-214ENST00000576409 ENOX1Q8TC92 643 aaKnown RBP19.92■□□□□ 0.78
ATPAF1-214ENST00000576409 CABS1Q96KC9 395 aa19.92■□□□□ 0.78
ATPAF1-214ENST00000576409 ZSCAN10Q96SZ4 725 aaPredicted RBP19.92■□□□□ 0.78
ATPAF1-214ENST00000576409 TUBB2BQ9BVA1 445 aa19.92■□□□□ 0.78
ATPAF1-214ENST00000576409 OSBPL5Q9H0X9 879 aaPredicted RBP19.92■□□□□ 0.78
ATPAF1-214ENST00000576409 PKD2L1Q9P0L9 805 aa19.92■□□□□ 0.78
ATPAF1-214ENST00000576409 DYNLL1P63167 89 aaKnown RBP19.92■□□□□ 0.78
ATPAF1-214ENST00000576409 GRIPAP1Q4V328 841 aa19.92■□□□□ 0.78
ATPAF1-214ENST00000576409 CYB5R4Q7L1T6 521 aa19.92■□□□□ 0.78
ATPAF1-214ENST00000576409 OXER1Q8TDS5 423 aa19.92■□□□□ 0.78
ATPAF1-214ENST00000576409 MRRFQ96E11 262 aaKnown RBP19.92■□□□□ 0.78
ATPAF1-214ENST00000576409 SH2B2O14492 632 aaPredicted RBP19.91■□□□□ 0.78
ATPAF1-214ENST00000576409 HIBADHP31937 336 aaKnown RBP19.91■□□□□ 0.78
ATPAF1-214ENST00000576409 KLHL30Q0D2K2 578 aa19.91■□□□□ 0.78
ATPAF1-214ENST00000576409 SLC9C1Q4G0N8 1177 aa19.91■□□□□ 0.78
ATPAF1-214ENST00000576409 CNNM4Q6P4Q7 775 aa19.91■□□□□ 0.78
ATPAF1-214ENST00000576409 LCORLQ8N3X6 602 aa19.91■□□□□ 0.78
ATPAF1-214ENST00000576409 ZBTB38Q8NAP3 1195 aaPredicted RBP19.91■□□□□ 0.78
ATPAF1-214ENST00000576409 ANKRD7Q92527 254 aa19.91■□□□□ 0.78
ATPAF1-214ENST00000576409 GDAQ9Y2T3 454 aa19.91■□□□□ 0.78
ATPAF1-214ENST00000576409 ADD2P35612 726 aa19.91■□□□□ 0.78
ATPAF1-214ENST00000576409 TRIML1Q8N9V2 468 aa19.91■□□□□ 0.78
ATPAF1-214ENST00000576409 LRRC27Q9C0I9 530 aa19.91■□□□□ 0.78
ATPAF1-214ENST00000576409 DDB1Q16531 1140 aa19.91■□□□□ 0.78
ATPAF1-214ENST00000576409 CEP85LQ5SZL2 805 aa19.91■□□□□ 0.78
ATPAF1-214ENST00000576409 SHC4Q6S5L8 630 aa19.91■□□□□ 0.78
ATPAF1-214ENST00000576409 IFT20Q8IY31 132 aa19.91■□□□□ 0.78
ATPAF1-214ENST00000576409 ZBTB21Q9ULJ3 1066 aa19.91■□□□□ 0.78
ATPAF1-214ENST00000576409 MCAMP43121 646 aa19.91■□□□□ 0.78
ATPAF1-214ENST00000576409 ST5P78524 1137 aa19.91■□□□□ 0.78
ATPAF1-214ENST00000576409 PPFIA1Q13136 1202 aa19.91■□□□□ 0.78
ATPAF1-214ENST00000576409 LLGL1Q15334 1064 aa19.91■□□□□ 0.78
ATPAF1-214ENST00000576409 NAA35Q5VZE5 725 aa19.91■□□□□ 0.78
ATPAF1-214ENST00000576409 MAEAQ7L5Y9 396 aa19.91■□□□□ 0.78
ATPAF1-214ENST00000576409 TUBGCP2Q9BSJ2 902 aa19.91■□□□□ 0.78
ATPAF1-214ENST00000576409 POLD4Q9HCU8 107 aa19.91■□□□□ 0.78
ATPAF1-214ENST00000576409 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.91■□□□□ 0.78
ATPAF1-214ENST00000576409 A0A1W2PRG0 241 aa19.9■□□□□ 0.78
ATPAF1-214ENST00000576409 MMP1P03956 469 aa19.9■□□□□ 0.78
ATPAF1-214ENST00000576409 FCHSD1Q86WN1 690 aa19.9■□□□□ 0.78
ATPAF1-214ENST00000576409 MKRN1Q9UHC7 482 aaKnown RBP19.9■□□□□ 0.78
ATPAF1-214ENST00000576409 RFC4P35249 363 aa19.9■□□□□ 0.78
ATPAF1-214ENST00000576409 BLIDQ8IZY5 108 aa19.9■□□□□ 0.78
ATPAF1-214ENST00000576409 SMARCC2Q8TAQ2 1214 aa19.9■□□□□ 0.78
ATPAF1-214ENST00000576409 TGFBRAP1Q8WUH2 860 aa19.9■□□□□ 0.78
ATPAF1-214ENST00000576409 TSGA10Q9BZW7 698 aa19.9■□□□□ 0.78
ATPAF1-214ENST00000576409 MYO1CO00159 1063 aa19.9■□□□□ 0.78
ATPAF1-214ENST00000576409 SLFN14P0C7P3 912 aa19.9■□□□□ 0.78
ATPAF1-214ENST00000576409 C2orf54Q08AI8 447 aa19.9■□□□□ 0.78
ATPAF1-214ENST00000576409 NONOQ15233 471 aaKnown RBP eCLIP19.9■□□□□ 0.78
ATPAF1-214ENST00000576409 DAAM2Q86T65 1068 aa19.9■□□□□ 0.78
ATPAF1-214ENST00000576409 TEX11Q8IYF3 940 aa19.9■□□□□ 0.78
ATPAF1-214ENST00000576409 ZNF622Q969S3 477 aaKnown RBP eCLIP19.9■□□□□ 0.78
ATPAF1-214ENST00000576409 CCDC51Q96ER9 411 aa19.9■□□□□ 0.78
ATPAF1-214ENST00000576409 EFCAB6Q5THR3 1501 aa19.9■□□□□ 0.78
ATPAF1-214ENST00000576409 CTNNA2P26232 953 aa19.89■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms