RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 LY9Q9HBG7 655 aa16.37■□□□□ 0.21
SCARF1-209ENST00000576012 PIK3C2AO00443 1686 aa16.36■□□□□ 0.21
SCARF1-209ENST00000576012 CDHR2Q9BYE9 1310 aa16.36■□□□□ 0.21
SCARF1-209ENST00000576012 NBPF26B4DH59 902 aa16.36■□□□□ 0.21
SCARF1-209ENST00000576012 ECM2O94769 699 aaPredicted RBP16.36■□□□□ 0.21
SCARF1-209ENST00000576012 NDUFA10O95299 355 aa16.36■□□□□ 0.21
SCARF1-209ENST00000576012 NBPF14Q5TI25 921 aa16.36■□□□□ 0.21
SCARF1-209ENST00000576012 NBPF10Q6P3W6 841 aaKnown RBP16.36■□□□□ 0.21
SCARF1-209ENST00000576012 NBPF15Q8N660 670 aa16.36■□□□□ 0.21
SCARF1-209ENST00000576012 JPH2Q9BR39 696 aaPredicted RBP16.36■□□□□ 0.21
SCARF1-209ENST00000576012 NAPBQ9H115 298 aa16.36■□□□□ 0.21
SCARF1-209ENST00000576012 REXO2Q9Y3B8 237 aaKnown RBP16.36■□□□□ 0.21
SCARF1-209ENST00000576012 A0A087WUV0 522 aaPredicted RBP16.36■□□□□ 0.21
SCARF1-209ENST00000576012 TTC26A0AVF1 554 aa16.36■□□□□ 0.21
SCARF1-209ENST00000576012 TSR1Q2NL82 804 aaKnown RBP16.36■□□□□ 0.21
SCARF1-209ENST00000576012 IGDCC4Q8TDY8 1250 aa16.36■□□□□ 0.21
SCARF1-209ENST00000576012 COG1Q8WTW3 980 aa16.36■□□□□ 0.21
SCARF1-209ENST00000576012 ARMT1Q9H993 441 aa16.36■□□□□ 0.21
SCARF1-209ENST00000576012 PIH1D3Q9NQM4 214 aaKnown RBP16.36■□□□□ 0.21
SCARF1-209ENST00000576012 PRPF6O94906 941 aaKnown RBP16.36■□□□□ 0.21
SCARF1-209ENST00000576012 IDEP14735 1019 aa16.36■□□□□ 0.21
SCARF1-209ENST00000576012 KLK7P49862 253 aa16.36■□□□□ 0.21
SCARF1-209ENST00000576012 RNASE9P60153 205 aaKnown RBP16.36■□□□□ 0.21
SCARF1-209ENST00000576012 RTN1Q16799 776 aa16.36■□□□□ 0.21
SCARF1-209ENST00000576012 RNF187Q5TA31 235 aaPredicted RBP16.36■□□□□ 0.21
SCARF1-209ENST00000576012 ANKRD13CQ8N6S4 541 aa16.36■□□□□ 0.21
SCARF1-209ENST00000576012 MIGA1Q8NAN2 632 aa16.36■□□□□ 0.21
SCARF1-209ENST00000576012 PLBD2Q8NHP8 589 aa16.36■□□□□ 0.21
SCARF1-209ENST00000576012 LACRTQ9GZZ8 138 aa16.36■□□□□ 0.21
SCARF1-209ENST00000576012 NALCNQ8IZF0 1738 aa16.35■□□□□ 0.21
SCARF1-209ENST00000576012 MINDY4BA8MYZ0 360 aa16.35■□□□□ 0.21
SCARF1-209ENST00000576012 SSBP05455 408 aaKnown RBP eCLIP16.35■□□□□ 0.21
SCARF1-209ENST00000576012 INPP5BP32019 993 aa16.35■□□□□ 0.21
SCARF1-209ENST00000576012 COPB1P53618 953 aaKnown RBP16.35■□□□□ 0.21
SCARF1-209ENST00000576012 KCNH5Q8NCM2 988 aa16.35■□□□□ 0.21
SCARF1-209ENST00000576012 NAA15Q9BXJ9 866 aaKnown RBP16.35■□□□□ 0.21
SCARF1-209ENST00000576012 IQSEC3Q9UPP2 1182 aaPredicted RBP16.35■□□□□ 0.21
SCARF1-209ENST00000576012 KDM4FA0A1W2PPD8 638 aa16.35■□□□□ 0.21
SCARF1-209ENST00000576012 HNRNPH1P31943 449 aaKnown RBP16.35■□□□□ 0.21
SCARF1-209ENST00000576012 CAPS2Q9BXY5 557 aa16.35■□□□□ 0.21
SCARF1-209ENST00000576012 MTMR7Q9Y216 660 aa16.35■□□□□ 0.21
SCARF1-209ENST00000576012 PPP1R3GB7ZBB8 358 aa16.34■□□□□ 0.21
SCARF1-209ENST00000576012 ERCC5P28715 1186 aaPredicted RBP16.34■□□□□ 0.21
SCARF1-209ENST00000576012 CUL4BQ13620 913 aa16.34■□□□□ 0.21
SCARF1-209ENST00000576012 MCTP2Q6DN12 878 aa16.34■□□□□ 0.21
SCARF1-209ENST00000576012 KRT26Q7Z3Y9 468 aa16.34■□□□□ 0.21
SCARF1-209ENST00000576012 ANKRD18AQ8IVF6 992 aa16.34■□□□□ 0.21
SCARF1-209ENST00000576012 RCCD1A6NED2 376 aa16.34■□□□□ 0.21
SCARF1-209ENST00000576012 KCNJ18B7U540 433 aa16.34■□□□□ 0.21
SCARF1-209ENST00000576012 AGPSO00116 658 aa16.34■□□□□ 0.21
SCARF1-209ENST00000576012 NDUFAB1O14561 156 aa16.34■□□□□ 0.21
SCARF1-209ENST00000576012 ATP2C2O75185 946 aa16.34■□□□□ 0.21
SCARF1-209ENST00000576012 MYCNP04198 464 aaPredicted RBP16.34■□□□□ 0.21
SCARF1-209ENST00000576012 AMPD2Q01433 879 aa16.34■□□□□ 0.21
SCARF1-209ENST00000576012 KCNJ12Q14500 433 aa16.34■□□□□ 0.21
SCARF1-209ENST00000576012 RILPL1Q5EBL4 403 aa16.34■□□□□ 0.21
SCARF1-209ENST00000576012 CNNM1Q9NRU3 951 aa16.34■□□□□ 0.21
SCARF1-209ENST00000576012 DMGDHQ9UI17 866 aaKnown RBP16.34■□□□□ 0.21
SCARF1-209ENST00000576012 BAZ2BQ9UIF8 2168 aaKnown RBP16.34■□□□□ 0.21
SCARF1-209ENST00000576012 SHTN1A0MZ66 631 aa16.34■□□□□ 0.21
SCARF1-209ENST00000576012 H7C1W4 665 aa16.34■□□□□ 0.21
SCARF1-209ENST00000576012 EIF5P55010 431 aaKnown RBP16.34■□□□□ 0.21
SCARF1-209ENST00000576012 SLC4A8Q2Y0W8 1093 aa16.34■□□□□ 0.21
SCARF1-209ENST00000576012 LDHAL6AQ6ZMR3 332 aa16.34■□□□□ 0.21
SCARF1-209ENST00000576012 LRP10Q7Z4F1 713 aa16.34■□□□□ 0.21
SCARF1-209ENST00000576012 NELFBQ8WX92 580 aa16.34■□□□□ 0.21
SCARF1-209ENST00000576012 ARL8AQ96BM9 186 aa16.34■□□□□ 0.21
SCARF1-209ENST00000576012 GEMIN8Q9NWZ8 242 aaKnown RBP16.34■□□□□ 0.21
SCARF1-209ENST00000576012 HEG1Q9ULI3 1381 aa16.34■□□□□ 0.21
SCARF1-209ENST00000576012 LAMA4Q16363 1823 aa16.33■□□□□ 0.21
SCARF1-209ENST00000576012 TRIM75PA6NK02 468 aa16.33■□□□□ 0.2
SCARF1-209ENST00000576012 MYO1BO43795 1136 aa16.33■□□□□ 0.2
SCARF1-209ENST00000576012 RUFY1Q96T51 708 aa16.33■□□□□ 0.2
SCARF1-209ENST00000576012 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.33■□□□□ 0.23e-6■■■■■ 34.1
SCARF1-209ENST00000576012 SRPRBQ9Y5M8 271 aaKnown RBP16.33■□□□□ 0.2
SCARF1-209ENST00000576012 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.33■□□□□ 0.2
SCARF1-209ENST00000576012 TACC3Q9Y6A5 838 aa16.33■□□□□ 0.2
SCARF1-209ENST00000576012 CPDO75976 1380 aa16.33■□□□□ 0.2
SCARF1-209ENST00000576012 RFX7Q2KHR2 1363 aa16.33■□□□□ 0.2
SCARF1-209ENST00000576012 RPS6KA5O75582 802 aa16.33■□□□□ 0.2
SCARF1-209ENST00000576012 MBD4O95243 580 aa16.33■□□□□ 0.2
SCARF1-209ENST00000576012 TATP17735 454 aaPredicted RBP16.33■□□□□ 0.2
SCARF1-209ENST00000576012 TTF1Q15361 905 aaPredicted RBP16.33■□□□□ 0.2
SCARF1-209ENST00000576012 ANKRD20A12PQ8NF67 263 aa16.33■□□□□ 0.2
SCARF1-209ENST00000576012 CTAGE1Q96RT6 745 aa16.33■□□□□ 0.2
SCARF1-209ENST00000576012 AGPAT5Q9NUQ2 364 aa16.33■□□□□ 0.2
SCARF1-209ENST00000576012 LUC7L2Q9Y383 392 aaKnown RBP16.33■□□□□ 0.2
SCARF1-209ENST00000576012 ESYT3A0FGR9 886 aa16.32■□□□□ 0.2
SCARF1-209ENST00000576012 ZFYP08048 801 aaPredicted RBP16.32■□□□□ 0.2
SCARF1-209ENST00000576012 MCM7P33993 719 aa16.32■□□□□ 0.2
SCARF1-209ENST00000576012 MAP2K2P36507 400 aa16.32■□□□□ 0.2
SCARF1-209ENST00000576012 LRRC1Q9BTT6 524 aa16.32■□□□□ 0.2
SCARF1-209ENST00000576012 PHKG2P15735 406 aa16.32■□□□□ 0.2
SCARF1-209ENST00000576012 CTCFLQ8NI51 663 aaPredicted RBP16.32■□□□□ 0.2
SCARF1-209ENST00000576012 BRMS1Q9HCU9 246 aa16.32■□□□□ 0.2
SCARF1-209ENST00000576012 V9GY48 417 aaPredicted RBP16.32■□□□□ 0.2
SCARF1-209ENST00000576012 FAM170AA1A519 330 aa16.32■□□□□ 0.2
SCARF1-209ENST00000576012 FMNL1O95466 1100 aaPredicted RBP16.32■□□□□ 0.2
SCARF1-209ENST00000576012 KRT14P02533 472 aa16.32■□□□□ 0.2
SCARF1-209ENST00000576012 PBX1P40424 430 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms