RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 STX8Q9UNK0 236 aa27.12■■□□□ 1.93
NPLOC4-217ENST00000574897 SNED1Q8TER0 1413 aa27.11■■□□□ 1.93
NPLOC4-217ENST00000574897 ADAMTSL1Q8N6G6 1762 aa27.11■■□□□ 1.93
NPLOC4-217ENST00000574897 MDM2Q00987 491 aaPredicted RBP27.11■■□□□ 1.93
NPLOC4-217ENST00000574897 CEP131Q9UPN4 1083 aa27.11■■□□□ 1.93
NPLOC4-217ENST00000574897 BMP6P22004 513 aa27.11■■□□□ 1.93
NPLOC4-217ENST00000574897 NLRP5P59047 1200 aa27.11■■□□□ 1.93
NPLOC4-217ENST00000574897 F8W031 263 aaPredicted RBP27.1■■□□□ 1.93
NPLOC4-217ENST00000574897 SP8Q8IXZ3 490 aa27.1■■□□□ 1.93
NPLOC4-217ENST00000574897 MXD3Q9BW11 206 aa27.1■■□□□ 1.93
NPLOC4-217ENST00000574897 MAD2L2Q9UI95 211 aa27.1■■□□□ 1.93
NPLOC4-217ENST00000574897 KIF5BP33176 963 aa27.09■■□□□ 1.93
NPLOC4-217ENST00000574897 CDK8P49336 464 aa27.09■■□□□ 1.93
NPLOC4-217ENST00000574897 EPSTI1Q96J88 318 aa27.09■■□□□ 1.93
NPLOC4-217ENST00000574897 BRMS1Q9HCU9 246 aa27.09■■□□□ 1.93
NPLOC4-217ENST00000574897 NRXN2Q9P2S2 1712 aa27.09■■□□□ 1.93
NPLOC4-217ENST00000574897 A0A087X0B3 334 aa27.09■■□□□ 1.93
NPLOC4-217ENST00000574897 IGSF3O75054 1194 aa27.09■■□□□ 1.93
NPLOC4-217ENST00000574897 LMOD1P29536 600 aaPredicted RBP27.09■■□□□ 1.93
NPLOC4-217ENST00000574897 PIK3AP1Q6ZUJ8 805 aa27.09■■□□□ 1.93
NPLOC4-217ENST00000574897 FILIP1Q7Z7B0 1213 aa27.09■■□□□ 1.93
NPLOC4-217ENST00000574897 ZNF579Q8NAF0 562 aaKnown RBP27.09■■□□□ 1.93
NPLOC4-217ENST00000574897 ANKS1AQ92625 1134 aa27.09■■□□□ 1.93
NPLOC4-217ENST00000574897 TMEM47Q9BQJ4 181 aa27.09■■□□□ 1.93
NPLOC4-217ENST00000574897 HSD3B7Q9H2F3 369 aa27.09■■□□□ 1.93
NPLOC4-217ENST00000574897 TYW1BQ6NUM6 668 aa27.08■■□□□ 1.93
NPLOC4-217ENST00000574897 CPVLQ9H3G5 476 aa27.08■■□□□ 1.93
NPLOC4-217ENST00000574897 ATP6V0A2Q9Y487 856 aa27.08■■□□□ 1.93
NPLOC4-217ENST00000574897 SRGNP10124 158 aa27.08■■□□□ 1.93
NPLOC4-217ENST00000574897 GRM4Q14833 912 aa27.08■■□□□ 1.93
NPLOC4-217ENST00000574897 TTC38Q5R3I4 469 aa27.08■■□□□ 1.93
NPLOC4-217ENST00000574897 AKT1S1Q96B36 256 aa27.08■■□□□ 1.93
NPLOC4-217ENST00000574897 GAKO14976 1311 aa27.07■■□□□ 1.92
NPLOC4-217ENST00000574897 CYTH3O43739 400 aa27.07■■□□□ 1.92
NPLOC4-217ENST00000574897 APBA3O96018 575 aa27.07■■□□□ 1.92
NPLOC4-217ENST00000574897 GOLGA8HP0CJ92 632 aa27.07■■□□□ 1.92
NPLOC4-217ENST00000574897 XPO4Q9C0E2 1151 aaKnown RBP27.07■■□□□ 1.92
NPLOC4-217ENST00000574897 IFNKQ9P0W0 207 aa27.07■■□□□ 1.92
NPLOC4-217ENST00000574897 DAGLAQ9Y4D2 1042 aa27.07■■□□□ 1.92
NPLOC4-217ENST00000574897 FAM205AQ6ZU69 1335 aa27.07■■□□□ 1.92
NPLOC4-217ENST00000574897 ACTN4O43707 911 aaKnown RBP27.07■■□□□ 1.92
NPLOC4-217ENST00000574897 ATP1A3P13637 1013 aa27.07■■□□□ 1.92
NPLOC4-217ENST00000574897 POSTNQ15063 836 aa27.07■■□□□ 1.92
NPLOC4-217ENST00000574897 MSL1Q68DK7 614 aa27.07■■□□□ 1.92
NPLOC4-217ENST00000574897 CERS5Q8N5B7 392 aa27.07■■□□□ 1.92
NPLOC4-217ENST00000574897 EYA3Q99504 573 aa27.07■■□□□ 1.92
NPLOC4-217ENST00000574897 MYH8P13535 1937 aa27.06■■□□□ 1.92
NPLOC4-217ENST00000574897 DOK7Q18PE1 504 aa27.06■■□□□ 1.92
NPLOC4-217ENST00000574897 C16orf86Q6ZW13 317 aa27.06■■□□□ 1.92
NPLOC4-217ENST00000574897 RASGRP4Q8TDF6 673 aa27.06■■□□□ 1.92
NPLOC4-217ENST00000574897 TBC1D22AQ8WUA7 517 aa27.06■■□□□ 1.92
NPLOC4-217ENST00000574897 FAM163AQ96GL9 167 aaPredicted RBP27.06■■□□□ 1.92
NPLOC4-217ENST00000574897 TCP11L1Q9NUJ3 509 aa27.06■■□□□ 1.92
NPLOC4-217ENST00000574897 SMC2O95347 1197 aa27.05■■□□□ 1.92
NPLOC4-217ENST00000574897 PTGDRQ13258 359 aa27.05■■□□□ 1.92
NPLOC4-217ENST00000574897 PICALMQ13492 652 aa27.05■■□□□ 1.92
NPLOC4-217ENST00000574897 MAN1B1Q9UKM7 699 aa27.05■■□□□ 1.92
NPLOC4-217ENST00000574897 DHX58Q96C10 678 aa27.05■■□□□ 1.92
NPLOC4-217ENST00000574897 MMP10P09238 476 aa27.04■■□□□ 1.92
NPLOC4-217ENST00000574897 LRRC8AQ8IWT6 810 aa27.04■■□□□ 1.92
NPLOC4-217ENST00000574897 NLGN1Q8N2Q7 840 aa27.04■■□□□ 1.92
NPLOC4-217ENST00000574897 SYMPKQ92797 1274 aaKnown RBP27.04■■□□□ 1.92
NPLOC4-217ENST00000574897 VWA3AA6NCI4 1184 aa27.03■■□□□ 1.92
NPLOC4-217ENST00000574897 SMTNL1A8MU46 457 aa27.03■■□□□ 1.92
NPLOC4-217ENST00000574897 PLCG2P16885 1265 aa27.03■■□□□ 1.92
NPLOC4-217ENST00000574897 CASP1P29466 404 aa27.03■■□□□ 1.92
NPLOC4-217ENST00000574897 IKBKBO14920 756 aa27.02■■□□□ 1.92
NPLOC4-217ENST00000574897 MCM7P33993 719 aa27.02■■□□□ 1.92
NPLOC4-217ENST00000574897 WWC2Q6AWC2 1192 aa27.02■■□□□ 1.92
NPLOC4-217ENST00000574897 ZC3H12CQ9C0D7 883 aaKnown RBP27.02■■□□□ 1.92
NPLOC4-217ENST00000574897 COA1Q9GZY4 146 aa27.02■■□□□ 1.92
NPLOC4-217ENST00000574897 TPM2P07951 284 aa27.01■■□□□ 1.92
NPLOC4-217ENST00000574897 NPR1P16066 1061 aa27.01■■□□□ 1.92
NPLOC4-217ENST00000574897 SCNN1DP51172 638 aa27.01■■□□□ 1.92
NPLOC4-217ENST00000574897 ATP2C1P98194 919 aaPredicted RBP27.01■■□□□ 1.92
NPLOC4-217ENST00000574897 MYL5Q02045 173 aa27.01■■□□□ 1.92
NPLOC4-217ENST00000574897 TMC4Q7Z404 712 aa27.01■■□□□ 1.92
NPLOC4-217ENST00000574897 CERS3Q8IU89 383 aa27.01■■□□□ 1.92
NPLOC4-217ENST00000574897 BLIDQ8IZY5 108 aa27.01■■□□□ 1.92
NPLOC4-217ENST00000574897 CEP95Q96GE4 821 aa27.01■■□□□ 1.92
NPLOC4-217ENST00000574897 UQCRHLA0A096LP55 91 aa27.01■■□□□ 1.91
NPLOC4-217ENST00000574897 PALM3A6NDB9 673 aaPredicted RBP27.01■■□□□ 1.91
NPLOC4-217ENST00000574897 UQCRHP07919 91 aa27.01■■□□□ 1.91
NPLOC4-217ENST00000574897 SLF2Q8IX21 1173 aa27.01■■□□□ 1.91
NPLOC4-217ENST00000574897 ELOA2Q8IYF1 753 aaPredicted RBP27.01■■□□□ 1.91
NPLOC4-217ENST00000574897 NEDD1Q8NHV4 660 aa27.01■■□□□ 1.91
NPLOC4-217ENST00000574897 DDX4Q9NQI0 724 aaKnown RBP27.01■■□□□ 1.91
NPLOC4-217ENST00000574897 AFMP43652 599 aa27■■□□□ 1.91
NPLOC4-217ENST00000574897 FANCCQ00597 558 aa27■■□□□ 1.91
NPLOC4-217ENST00000574897 IL17AQ16552 155 aa27■■□□□ 1.91
NPLOC4-217ENST00000574897 HSP90AA4PQ58FG1 418 aa27■■□□□ 1.91
NPLOC4-217ENST00000574897 DPF2Q92785 391 aa27■■□□□ 1.91
NPLOC4-217ENST00000574897 QSER1Q2KHR3 1735 aa27■■□□□ 1.91
NPLOC4-217ENST00000574897 PLSCR1O15162 318 aa27■■□□□ 1.91
NPLOC4-217ENST00000574897 SARSP49591 514 aaKnown RBP27■■□□□ 1.91
NPLOC4-217ENST00000574897 CCDC178Q5BJE1 867 aa27■■□□□ 1.91
NPLOC4-217ENST00000574897 USP17L2Q6R6M4 530 aa27■■□□□ 1.91
NPLOC4-217ENST00000574897 DPP8Q6V1X1 898 aaPredicted RBP27■■□□□ 1.91
NPLOC4-217ENST00000574897 HEATR3Q7Z4Q2 680 aa27■■□□□ 1.91
NPLOC4-217ENST00000574897 TTF2Q9UNY4 1162 aaKnown RBP27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms